Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
ATP2B3Q16720 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ATP2B3Q16720 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ATP2B3Q16720 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.26□□□□□ -1.89
ATP2B3Q16720 Y_RNA.39-201ENST00000362620 98 ntBASIC3.26□□□□□ -1.89
ATP2B3Q16720 Y_RNA.405-201ENST00000383979 100 ntBASIC3.26□□□□□ -1.89
ATP2B3Q16720 Y_RNA.451-201ENST00000384200 100 ntBASIC3.26□□□□□ -1.89
ATP2B3Q16720 RNU6-708P-201ENST00000384217 107 ntBASIC3.26□□□□□ -1.89
ATP2B3Q16720 Y_RNA.524-201ENST00000384564 100 ntBASIC3.26□□□□□ -1.89
ATP2B3Q16720 Y_RNA.561-201ENST00000384694 100 ntBASIC3.26□□□□□ -1.89
ATP2B3Q16720 MIR568-201ENST00000385036 95 ntBASIC3.26□□□□□ -1.89
ATP2B3Q16720 AL512633.1-201ENST00000399931 655 ntBASIC3.26□□□□□ -1.89
ATP2B3Q16720 AL365496.1-201ENST00000426885 215 ntBASIC3.26□□□□□ -1.89
ATP2B3Q16720 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.26□□□□□ -1.89
ATP2B3Q16720 AC006026.2-201ENST00000457376 180 ntBASIC3.26□□□□□ -1.89
ATP2B3Q16720 U8.20-201ENST00000459445 131 ntBASIC3.26□□□□□ -1.89
ATP2B3Q16720 RPL22P13-201ENST00000493291 347 ntBASIC3.26□□□□□ -1.89
ATP2B3Q16720 AC096725.1-201ENST00000514266 313 ntBASIC3.26□□□□□ -1.89
ATP2B3Q16720 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.26□□□□□ -1.89
ATP2B3Q16720 AC006600.1-201ENST00000572529 153 ntBASIC3.26□□□□□ -1.89
ATP2B3Q16720 AC113195.1-201ENST00000579952 141 ntBASIC3.26□□□□□ -1.89
ATP2B3Q16720 AC010928.2-201ENST00000588017 287 ntBASIC3.26□□□□□ -1.89
ATP2B3Q16720 RPL23AP78-201ENST00000599928 470 ntBASIC3.26□□□□□ -1.89
ATP2B3Q16720 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ATP2B3Q16720 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.26□□□□□ -1.89
ATP2B3Q16720 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
ATP2B3Q16720 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
ATP2B3Q16720 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
ATP2B3Q16720 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
ATP2B3Q16720 AC117470.1-201ENST00000381974 330 ntBASIC3.25□□□□□ -1.89
ATP2B3Q16720 RNU6-968P-201ENST00000384076 107 ntBASIC3.25□□□□□ -1.89
ATP2B3Q16720 Y_RNA.455-201ENST00000384230 98 ntBASIC3.25□□□□□ -1.89
ATP2B3Q16720 MIR487A-201ENST00000385009 80 ntBASIC3.25□□□□□ -1.89
ATP2B3Q16720 RNU6-823P-201ENST00000391042 103 ntBASIC3.25□□□□□ -1.89
ATP2B3Q16720 RNU6-700P-201ENST00000391043 107 ntBASIC3.25□□□□□ -1.89
ATP2B3Q16720 MIR548F4-201ENST00000408515 105 ntBASIC3.25□□□□□ -1.89
ATP2B3Q16720 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.25□□□□□ -1.89
ATP2B3Q16720 AL358453.1-201ENST00000422522 250 ntBASIC3.25□□□□□ -1.89
ATP2B3Q16720 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.25□□□□□ -1.89
ATP2B3Q16720 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.25□□□□□ -1.89
ATP2B3Q16720 AC112492.4-201ENST00000456549 352 ntBASIC3.25□□□□□ -1.89
ATP2B3Q16720 AF186996.7-201ENST00000492781 209 ntBASIC3.25□□□□□ -1.89
ATP2B3Q16720 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.25□□□□□ -1.89
ATP2B3Q16720 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.25□□□□□ -1.89
ATP2B3Q16720 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.25□□□□□ -1.89
ATP2B3Q16720 AL590705.4-201ENST00000532209 134 ntBASIC3.25□□□□□ -1.89
ATP2B3Q16720 MIR4635-201ENST00000583759 79 ntBASIC3.25□□□□□ -1.89
ATP2B3Q16720 VN1R107P-201ENST00000601784 209 ntBASIC3.25□□□□□ -1.89
ATP2B3Q16720 AC091152.3-201ENST00000604227 325 ntBASIC3.25□□□□□ -1.89
ATP2B3Q16720 AC008121.3-201ENST00000618726 433 ntBASIC3.25□□□□□ -1.89
ATP2B3Q16720 AC024581.2-201ENST00000619986 252 ntBASIC3.25□□□□□ -1.89
ATP2B3Q16720 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.25□□□□□ -1.89
ATP2B3Q16720 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
ATP2B3Q16720 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
ATP2B3Q16720 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.24□□□□□ -1.89
ATP2B3Q16720 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
ATP2B3Q16720 AC233981.2-201ENST00000611524 1614 ntBASIC3.24□□□□□ -1.89
ATP2B3Q16720 Y_RNA.106-201ENST00000363189 100 ntBASIC3.24□□□□□ -1.89
ATP2B3Q16720 Y_RNA.144-201ENST00000363521 113 ntBASIC3.24□□□□□ -1.89
ATP2B3Q16720 Y_RNA.504-201ENST00000384481 104 ntBASIC3.24□□□□□ -1.89
ATP2B3Q16720 MIR625-201ENST00000385047 85 ntBASIC3.24□□□□□ -1.89
ATP2B3Q16720 RNA5SP354-201ENST00000391247 136 ntBASIC3.24□□□□□ -1.89
ATP2B3Q16720 RNU6-1245P-201ENST00000411130 106 ntBASIC3.24□□□□□ -1.89
ATP2B3Q16720 AC004383.1-201ENST00000438135 289 ntBASIC3.24□□□□□ -1.89
ATP2B3Q16720 AP000705.1-201ENST00000454567 350 ntBASIC3.24□□□□□ -1.89
ATP2B3Q16720 U8.22-201ENST00000459141 133 ntBASIC3.24□□□□□ -1.89
ATP2B3Q16720 RNU7-87P-201ENST00000459343 62 ntBASIC3.24□□□□□ -1.89
ATP2B3Q16720 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.24□□□□□ -1.89
ATP2B3Q16720 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.24□□□□□ -1.89
ATP2B3Q16720 AC004486.1-201ENST00000546846 233 ntBASIC3.24□□□□□ -1.89
ATP2B3Q16720 AL117187.1-201ENST00000555482 181 ntBASIC3.24□□□□□ -1.89
ATP2B3Q16720 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.24□□□□□ -1.89
ATP2B3Q16720 AC008269.2-201ENST00000561915 1105 ntBASIC3.24□□□□□ -1.89
ATP2B3Q16720 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.24□□□□□ -1.89
ATP2B3Q16720 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.23□□□□□ -1.89
ATP2B3Q16720 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ATP2B3Q16720 RNU6-222P-201ENST00000362438 107 ntBASIC3.23□□□□□ -1.89
ATP2B3Q16720 RNU6-843P-201ENST00000384454 104 ntBASIC3.23□□□□□ -1.89
ATP2B3Q16720 Y_RNA.512-201ENST00000384518 102 ntBASIC3.23□□□□□ -1.89
ATP2B3Q16720 SNORA12.2-201ENST00000391040 156 ntBASIC3.23□□□□□ -1.89
ATP2B3Q16720 AL139095.1-201ENST00000404326 391 ntBASIC3.23□□□□□ -1.89
ATP2B3Q16720 HMGN2P35-201ENST00000412164 270 ntBASIC3.23□□□□□ -1.89
ATP2B3Q16720 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.23□□□□□ -1.89
ATP2B3Q16720 DPH3P2-201ENST00000422618 250 ntBASIC3.23□□□□□ -1.89
ATP2B3Q16720 AC124916.1-201ENST00000444020 547 ntBASIC3.23□□□□□ -1.89
ATP2B3Q16720 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ATP2B3Q16720 RPS3P1-201ENST00000456781 192 ntBASIC3.23□□□□□ -1.89
ATP2B3Q16720 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.23□□□□□ -1.89
ATP2B3Q16720 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.23□□□□□ -1.89
ATP2B3Q16720 RNU5F-8P-201ENST00000515941 111 ntBASIC3.23□□□□□ -1.89
ATP2B3Q16720 COX6CP5-201ENST00000527162 228 ntBASIC3.23□□□□□ -1.89
ATP2B3Q16720 GNAI2P1-201ENST00000541815 315 ntBASIC3.23□□□□□ -1.89
ATP2B3Q16720 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.23□□□□□ -1.89
ATP2B3Q16720 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.23□□□□□ -1.89
ATP2B3Q16720 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.23□□□□□ -1.89
ATP2B3Q16720 AC010889.1-201ENST00000566193 2666 ntBASIC3.22□□□□□ -1.89
ATP2B3Q16720 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
ATP2B3Q16720 RNA5SP68-201ENST00000363885 119 ntBASIC3.22□□□□□ -1.89
ATP2B3Q16720 U3.13-201ENST00000364804 214 ntBASIC3.22□□□□□ -1.89
ATP2B3Q16720 RNU6-622P-201ENST00000384272 103 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms