Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 Y_RNA.116-201ENST00000363292 103 ntBASIC0.49□□□□□ -2.33
H3F3AP84243 U3.9-201ENST00000363823 204 ntBASIC0.49□□□□□ -2.33
H3F3AP84243 ERHP2-201ENST00000402323 299 ntBASIC0.49□□□□□ -2.33
H3F3AP84243 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.49□□□□□ -2.33
H3F3AP84243 HIGD1AP15-201ENST00000416198 280 ntBASIC0.49□□□□□ -2.33
H3F3AP84243 AC244670.1-201ENST00000436879 112 ntBASIC0.49□□□□□ -2.33
H3F3AP84243 BET1P1-201ENST00000482276 359 ntBASIC0.49□□□□□ -2.33
H3F3AP84243 HMGN1P12-201ENST00000499125 195 ntBASIC0.49□□□□□ -2.33
H3F3AP84243 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.49□□□□□ -2.33
H3F3AP84243 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.49□□□□□ -2.33
H3F3AP84243 AC011406.1-201ENST00000512440 370 ntBASIC0.49□□□□□ -2.33
H3F3AP84243 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.49□□□□□ -2.33
H3F3AP84243 RNU6-856P-201ENST00000516959 98 ntBASIC0.49□□□□□ -2.33
H3F3AP84243 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.49□□□□□ -2.33
H3F3AP84243 MIR3923-201ENST00000579521 83 ntBASIC0.49□□□□□ -2.33
H3F3AP84243 MIR4742-201ENST00000581069 85 ntBASIC0.49□□□□□ -2.33
H3F3AP84243 AC008752.3-201ENST00000588113 712 ntBASIC0.49□□□□□ -2.33
H3F3AP84243 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.49□□□□□ -2.33
H3F3AP84243 AC105148.1-201ENST00000604961 409 ntBASIC0.49□□□□□ -2.33
H3F3AP84243 AC121334.2-201ENST00000605387 271 ntBASIC0.49□□□□□ -2.33
H3F3AP84243 AL139286.2-201ENST00000606838 396 ntBASIC0.49□□□□□ -2.33
H3F3AP84243 AP002360.4-201ENST00000606980 481 ntBASIC0.49□□□□□ -2.33
H3F3AP84243 AC104465.1-201ENST00000611365 139 ntBASIC0.49□□□□□ -2.33
H3F3AP84243 U4.7-201ENST00000638126 106 ntBASIC0.49□□□□□ -2.33
H3F3AP84243 AL442644.1-201ENST00000454390 3105 ntBASIC0.48□□□□□ -2.33
H3F3AP84243 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
H3F3AP84243 RNU6-105P-201ENST00000363909 104 ntBASIC0.48□□□□□ -2.33
H3F3AP84243 RNA5SP499-201ENST00000363982 119 ntBASIC0.48□□□□□ -2.33
H3F3AP84243 RNU6-534P-201ENST00000364877 106 ntBASIC0.48□□□□□ -2.33
H3F3AP84243 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
H3F3AP84243 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
H3F3AP84243 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.48□□□□□ -2.33
H3F3AP84243 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.48□□□□□ -2.33
H3F3AP84243 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.48□□□□□ -2.33
H3F3AP84243 AC060773.1-201ENST00000421698 310 ntBASIC0.48□□□□□ -2.33
H3F3AP84243 AC011233.1-201ENST00000422812 283 ntBASIC0.48□□□□□ -2.33
H3F3AP84243 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.48□□□□□ -2.33
H3F3AP84243 CETN4P-201ENST00000432407 469 ntBASIC0.48□□□□□ -2.33
H3F3AP84243 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.48□□□□□ -2.33
H3F3AP84243 AC092628.1-201ENST00000436250 252 ntBASIC0.48□□□□□ -2.33
H3F3AP84243 AC243964.1-201ENST00000441814 261 ntBASIC0.48□□□□□ -2.33
H3F3AP84243 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.48□□□□□ -2.33
H3F3AP84243 AP003484.1-201ENST00000530974 250 ntBASIC0.48□□□□□ -2.33
H3F3AP84243 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.48□□□□□ -2.33
H3F3AP84243 SNORA4-201ENST00000584302 138 ntBASIC0.48□□□□□ -2.33
H3F3AP84243 CTHRC1P1-201ENST00000605383 469 ntBASIC0.48□□□□□ -2.33
H3F3AP84243 AL353149.1-201ENST00000610667 244 ntBASIC0.48□□□□□ -2.33
H3F3AP84243 PART1_2.1-201ENST00000612397 250 ntBASIC0.48□□□□□ -2.33
H3F3AP84243 AC136475.10-201ENST00000620253 385 ntBASIC0.48□□□□□ -2.33
H3F3AP84243 RNU6-43P-201ENST00000384302 107 ntBASIC0.47□□□□□ -2.33
H3F3AP84243 RNY1P14-201ENST00000384426 108 ntBASIC0.47□□□□□ -2.33
H3F3AP84243 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.47□□□□□ -2.33
H3F3AP84243 RNA5SP201-201ENST00000410316 124 ntBASIC0.47□□□□□ -2.33
H3F3AP84243 RNU6-293P-201ENST00000411259 106 ntBASIC0.47□□□□□ -2.33
H3F3AP84243 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.47□□□□□ -2.33
H3F3AP84243 AC010975.2-201ENST00000427781 588 ntBASIC0.47□□□□□ -2.33
H3F3AP84243 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.47□□□□□ -2.33
H3F3AP84243 SNORD79.1-201ENST00000516069 84 ntBASIC0.47□□□□□ -2.33
H3F3AP84243 MTATP6P15-201ENST00000527233 835 ntBASIC0.47□□□□□ -2.33
H3F3AP84243 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.47□□□□□ -2.33
H3F3AP84243 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.47□□□□□ -2.33
H3F3AP84243 MIR5697-201ENST00000578045 78 ntBASIC0.47□□□□□ -2.33
H3F3AP84243 MIR5692A1-201ENST00000580523 69 ntBASIC0.47□□□□□ -2.33
H3F3AP84243 AL606834.3-201ENST00000602615 496 ntBASIC0.47□□□□□ -2.33
H3F3AP84243 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.47□□□□□ -2.33
H3F3AP84243 AC006927.4-201ENST00000639187 543 ntBASIC0.47□□□□□ -2.33
H3F3AP84243 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
H3F3AP84243 RNU6-1141P-201ENST00000364520 107 ntBASIC0.46□□□□□ -2.34
H3F3AP84243 SNORA72.2-201ENST00000365028 127 ntBASIC0.46□□□□□ -2.34
H3F3AP84243 Y_RNA.354-201ENST00000365448 111 ntBASIC0.46□□□□□ -2.34
H3F3AP84243 RPS20P2-201ENST00000402520 389 ntBASIC0.46□□□□□ -2.34
H3F3AP84243 AC114491.1-201ENST00000416095 246 ntBASIC0.46□□□□□ -2.34
H3F3AP84243 AL353777.1-201ENST00000425552 326 ntBASIC0.46□□□□□ -2.34
H3F3AP84243 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.46□□□□□ -2.34
H3F3AP84243 AC092991.1-201ENST00000477176 376 ntBASIC0.46□□□□□ -2.34
H3F3AP84243 COX6CP6-201ENST00000490840 228 ntBASIC0.46□□□□□ -2.34
H3F3AP84243 RNA5SP220-201ENST00000516298 104 ntBASIC0.46□□□□□ -2.34
H3F3AP84243 RNU4-54P-201ENST00000516428 129 ntBASIC0.46□□□□□ -2.34
H3F3AP84243 RNA5SP121-201ENST00000516537 101 ntBASIC0.46□□□□□ -2.34
H3F3AP84243 RNU6-922P-201ENST00000516753 99 ntBASIC0.46□□□□□ -2.34
H3F3AP84243 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.46□□□□□ -2.34
H3F3AP84243 AC016957.1-201ENST00000534895 309 ntBASIC0.46□□□□□ -2.34
H3F3AP84243 AC090888.2-201ENST00000559765 1144 ntBASIC0.46□□□□□ -2.34
H3F3AP84243 MIR4307-201ENST00000582802 84 ntBASIC0.46□□□□□ -2.34
H3F3AP84243 AL929325.1-201ENST00000603096 117 ntBASIC0.46□□□□□ -2.34
H3F3AP84243 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.46□□□□□ -2.34
H3F3AP84243 AC021506.2-201ENST00000612354 169 ntBASIC0.46□□□□□ -2.34
H3F3AP84243 PCGEM1.1-201ENST00000613431 131 ntBASIC0.46□□□□□ -2.34
H3F3AP84243 AC106858.1-201ENST00000637497 429 ntBASIC0.46□□□□□ -2.34
H3F3AP84243 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
H3F3AP84243 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.45□□□□□ -2.34
H3F3AP84243 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
H3F3AP84243 AL391994.1-201ENST00000254724 282 ntBASIC0.45□□□□□ -2.34
H3F3AP84243 SNORD18A-201ENST00000363753 72 ntBASIC0.45□□□□□ -2.34
H3F3AP84243 RNU6-371P-201ENST00000364283 108 ntBASIC0.45□□□□□ -2.34
H3F3AP84243 RNU1-133P-201ENST00000364867 167 ntBASIC0.45□□□□□ -2.34
H3F3AP84243 SNORD116.1-201ENST00000365628 92 ntBASIC0.45□□□□□ -2.34
H3F3AP84243 RNU6-692P-201ENST00000384496 107 ntBASIC0.45□□□□□ -2.34
H3F3AP84243 RNU6-1054P-201ENST00000411293 104 ntBASIC0.45□□□□□ -2.34
H3F3AP84243 EEF1A1P40-201ENST00000412883 573 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms