Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC-0.17□□□□□ -2.44
PRKDCP78527 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-0.17□□□□□ -2.44
PRKDCP78527 AC096586.1-201ENST00000610267 561 ntBASIC-0.17□□□□□ -2.44
PRKDCP78527 AC010133.1-201ENST00000615809 842 ntBASIC-0.17□□□□□ -2.44
PRKDCP78527 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
PRKDCP78527 MIR18A-201ENST00000362310 71 ntBASIC-0.17□□□□□ -2.44
PRKDCP78527 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.17□□□□□ -2.44
PRKDCP78527 RNA5SP128-201ENST00000365305 116 ntBASIC-0.17□□□□□ -2.44
PRKDCP78527 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC-0.17□□□□□ -2.44
PRKDCP78527 MTND2P5-201ENST00000432656 1006 ntBASIC-0.17□□□□□ -2.44
PRKDCP78527 MTCYBP15-201ENST00000433123 1127 ntBASIC-0.17□□□□□ -2.44
PRKDCP78527 AC005094.1-201ENST00000440420 368 ntBASIC-0.17□□□□□ -2.44
PRKDCP78527 AC243964.1-201ENST00000441814 261 ntBASIC-0.17□□□□□ -2.44
PRKDCP78527 AC023194.1-201ENST00000493084 308 ntBASIC-0.17□□□□□ -2.44
PRKDCP78527 AC022861.1-201ENST00000522981 663 ntBASIC-0.17□□□□□ -2.44
PRKDCP78527 AC093023.1-201ENST00000547375 507 ntBASIC-0.17□□□□□ -2.44
PRKDCP78527 AC112693.2-201ENST00000556538 232 ntBASIC-0.17□□□□□ -2.44
PRKDCP78527 AC137800.2-201ENST00000574375 120 ntBASIC-0.17□□□□□ -2.44
PRKDCP78527 MIR4431-201ENST00000579990 94 ntBASIC-0.17□□□□□ -2.44
PRKDCP78527 AC104985.3-201ENST00000623479 597 ntBASIC-0.17□□□□□ -2.44
PRKDCP78527 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.18□□□□□ -2.44
PRKDCP78527 MIR301A-201ENST00000385261 86 ntBASIC-0.18□□□□□ -2.44
PRKDCP78527 SNORD105-201ENST00000386910 85 ntBASIC-0.18□□□□□ -2.44
PRKDCP78527 AL049545.1-201ENST00000401856 572 ntBASIC-0.18□□□□□ -2.44
PRKDCP78527 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.18□□□□□ -2.44
PRKDCP78527 AL356583.2-201ENST00000426536 280 ntBASIC-0.18□□□□□ -2.44
PRKDCP78527 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.18□□□□□ -2.44
PRKDCP78527 MTND1P28-201ENST00000435623 950 ntBASIC-0.18□□□□□ -2.44
PRKDCP78527 MTCO3P18-201ENST00000440206 761 ntBASIC-0.18□□□□□ -2.44
PRKDCP78527 RPS3AP17-201ENST00000472594 777 ntBASIC-0.18□□□□□ -2.44
PRKDCP78527 MTCO3P7-201ENST00000510008 774 ntBASIC-0.18□□□□□ -2.44
PRKDCP78527 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.18□□□□□ -2.44
PRKDCP78527 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.18□□□□□ -2.44
PRKDCP78527 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC-0.18□□□□□ -2.44
PRKDCP78527 AC098483.2-201ENST00000603158 454 ntBASIC-0.18□□□□□ -2.44
PRKDCP78527 AL163051.2-201ENST00000618976 735 ntBASIC-0.18□□□□□ -2.44
PRKDCP78527 uc_338.16-201ENST00000621804 95 ntBASIC-0.18□□□□□ -2.44
PRKDCP78527 RNA5SP323-201ENST00000391094 133 ntBASIC-0.18□□□□□ -2.44
PRKDCP78527 Y_RNA.597-201ENST00000410463 100 ntBASIC-0.18□□□□□ -2.44
PRKDCP78527 ARL5AP1-201ENST00000418991 388 ntBASIC-0.18□□□□□ -2.44
PRKDCP78527 PSMA6P3-201ENST00000428242 164 ntBASIC-0.18□□□□□ -2.44
PRKDCP78527 MTATP6P16-201ENST00000434543 526 ntBASIC-0.18□□□□□ -2.44
PRKDCP78527 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.18□□□□□ -2.44
PRKDCP78527 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.18□□□□□ -2.44
PRKDCP78527 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC-0.18□□□□□ -2.44
PRKDCP78527 SNRPGP20-201ENST00000604477 205 ntBASIC-0.18□□□□□ -2.44
PRKDCP78527 AC104408.1-201ENST00000605241 170 ntBASIC-0.18□□□□□ -2.44
PRKDCP78527 AC136475.10-201ENST00000620253 385 ntBASIC-0.18□□□□□ -2.44
PRKDCP78527 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.18□□□□□ -2.44
PRKDCP78527 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.18□□□□□ -2.44
PRKDCP78527 RNU6-877P-201ENST00000383868 107 ntBASIC-0.18□□□□□ -2.44
PRKDCP78527 AL133475.1-201ENST00000404414 305 ntBASIC-0.18□□□□□ -2.44
PRKDCP78527 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC-0.18□□□□□ -2.44
PRKDCP78527 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.18□□□□□ -2.44
PRKDCP78527 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC-0.18□□□□□ -2.44
PRKDCP78527 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.18□□□□□ -2.44
PRKDCP78527 MTND1P22-201ENST00000510572 951 ntBASIC-0.18□□□□□ -2.44
PRKDCP78527 AC115990.1-201ENST00000526957 301 ntBASIC-0.18□□□□□ -2.44
PRKDCP78527 RNU6-28P-201ENST00000362378 107 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 RNU6-655P-201ENST00000362858 107 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 MTCO3P41-201ENST00000414801 328 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.19□□□□□ -2.44
PRKDCP78527 MTND5P2-201ENST00000442927 1142 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 MTND3P4-201ENST00000453537 303 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 RNU7-56P-201ENST00000458744 62 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.19□□□□□ -2.44
PRKDCP78527 AC091860.1-201ENST00000505723 432 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 TRAPPC2P7-201ENST00000509650 231 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 AP001328.1-201ENST00000528550 176 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 AL442163.3-201ENST00000554110 156 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.19□□□□□ -2.44
PRKDCP78527 AL132657.2-201ENST00000564417 358 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.19□□□□□ -2.44
PRKDCP78527 MIR3165-201ENST00000579874 75 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.19□□□□□ -2.44
PRKDCP78527 RNU6-898P-201ENST00000365627 104 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 SNORA80D-201ENST00000384488 135 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 SNORD71-201ENST00000411292 86 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 AC027644.1-201ENST00000419595 298 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 C8orf59P1-201ENST00000429930 303 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-0.19□□□□□ -2.44
PRKDCP78527 SNORD57-201ENST00000448188 72 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 AC090888.2-201ENST00000559765 1144 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 AP002906.1-201ENST00000603405 233 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 SUMO2P14-201ENST00000604488 293 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 RNU6-994P-201ENST00000410507 111 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 AL050341.1-201ENST00000447743 313 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 MTCO2P18-201ENST00000457151 658 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 AC138869.1-201ENST00000568623 124 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 AC063943.3-201ENST00000615562 356 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 AL356596.1-201ENST00000624230 379 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 MTND1P37-201ENST00000636562 264 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 SNORD114-12-201ENST00000365400 75 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 RNU6-564P-201ENST00000410983 104 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC-0.19□□□□□ -2.44
PRKDCP78527 SKA2P1-201ENST00000425592 390 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 VN1R10P-201ENST00000447106 875 ntBASIC-0.19□□□□□ -2.44
PRKDCP78527 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms