Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AC093913.1-201ENST00000614178 329 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 AC100810.6-201ENST00000638068 285 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 AC023934.1-201ENST00000574529 2389 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 RNA5SP98-201ENST00000363158 137 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 SNORA75B-201ENST00000384053 137 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 MIR32-201ENST00000384965 70 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 MIR10B-201ENST00000385011 110 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 MIR301A-201ENST00000385261 86 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 MIR320C1-201ENST00000408566 88 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 Y_RNA.623-201ENST00000411128 95 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 RPS25P9-201ENST00000435591 252 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.22□□□□□ -2.37
ABCA4P78363 MTCO1P27-201ENST00000448269 226 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 Y_RNA.644-201ENST00000459006 113 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 AC097473.1-201ENST00000508142 408 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 RNU4-54P-201ENST00000516428 129 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 RNA5SP168-201ENST00000516642 112 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.22□□□□□ -2.37
ABCA4P78363 DEFB108A-201ENST00000530110 222 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.22□□□□□ -2.37
ABCA4P78363 MIR4709-201ENST00000577272 72 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 AL138726.1-201ENST00000614873 333 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.22□□□□□ -2.37
ABCA4P78363 AC099654.8-201ENST00000637757 681 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 RNY1P8-201ENST00000383970 114 ntBASIC0.21□□□□□ -2.38
ABCA4P78363 Y_RNA.453-201ENST00000384223 109 ntBASIC0.21□□□□□ -2.38
ABCA4P78363 Y_RNA.534-201ENST00000384599 112 ntBASIC0.21□□□□□ -2.38
ABCA4P78363 RPS3AP36-201ENST00000398190 775 ntBASIC0.21□□□□□ -2.38
ABCA4P78363 MIR1185-1-201ENST00000408598 86 ntBASIC0.21□□□□□ -2.38
ABCA4P78363 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.21□□□□□ -2.38
ABCA4P78363 AL953862.1-201ENST00000423016 168 ntBASIC0.21□□□□□ -2.38
ABCA4P78363 AC244023.1-201ENST00000426884 112 ntBASIC0.21□□□□□ -2.38
ABCA4P78363 GAPDHP17-201ENST00000449858 1001 ntBASIC0.21□□□□□ -2.38
ABCA4P78363 SNORD124-201ENST00000459577 104 ntBASIC0.21□□□□□ -2.38
ABCA4P78363 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.21□□□□□ -2.38
ABCA4P78363 AL138889.2-201ENST00000603883 242 ntBASIC0.21□□□□□ -2.38
ABCA4P78363 AC242498.1-201ENST00000604134 111 ntBASIC0.21□□□□□ -2.38
ABCA4P78363 AL162730.1-201ENST00000605734 292 ntBASIC0.21□□□□□ -2.38
ABCA4P78363 AC243994.1-201ENST00000618627 109 ntBASIC0.21□□□□□ -2.38
ABCA4P78363 MIR6755-201ENST00000619993 66 ntBASIC0.21□□□□□ -2.38
ABCA4P78363 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.21□□□□□ -2.38
ABCA4P78363 RNU5A-8P-201ENST00000364102 114 ntBASIC0.21□□□□□ -2.38
ABCA4P78363 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.21□□□□□ -2.38
ABCA4P78363 SNX3P1X-201ENST00000414887 175 ntBASIC0.21□□□□□ -2.38
ABCA4P78363 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.21□□□□□ -2.38
ABCA4P78363 TXNL1P1-201ENST00000429528 554 ntBASIC0.21□□□□□ -2.38
ABCA4P78363 AC092423.1-201ENST00000430165 186 ntBASIC0.21□□□□□ -2.38
ABCA4P78363 RPL37P21-201ENST00000435890 276 ntBASIC0.21□□□□□ -2.38
ABCA4P78363 RNU7-34P-201ENST00000459394 64 ntBASIC0.21□□□□□ -2.38
ABCA4P78363 AC105758.1-201ENST00000506038 399 ntBASIC0.21□□□□□ -2.38
ABCA4P78363 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.21□□□□□ -2.38
ABCA4P78363 RNY4P37-201ENST00000516225 96 ntBASIC0.21□□□□□ -2.38
ABCA4P78363 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.21□□□□□ -2.38
ABCA4P78363 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.21□□□□□ -2.38
ABCA4P78363 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC0.21□□□□□ -2.38
ABCA4P78363 AC131280.1-202ENST00000624067 4211 ntBASIC0.2□□□□□ -2.38
ABCA4P78363 MTND4P16-201ENST00000466108 1367 ntBASIC0.2□□□□□ -2.38
ABCA4P78363 RNU6-843P-201ENST00000384454 104 ntBASIC0.2□□□□□ -2.38
ABCA4P78363 MIR153-2-201ENST00000385225 87 ntBASIC0.2□□□□□ -2.38
ABCA4P78363 ELOCP9-201ENST00000418624 239 ntBASIC0.2□□□□□ -2.38
ABCA4P78363 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.2□□□□□ -2.38
ABCA4P78363 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.2□□□□□ -2.38
ABCA4P78363 GXYLT1P1-201ENST00000446657 490 ntBASIC0.2□□□□□ -2.38
ABCA4P78363 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.2□□□□□ -2.38
ABCA4P78363 RPL39P38-201ENST00000467018 153 ntBASIC0.2□□□□□ -2.38
ABCA4P78363 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.2□□□□□ -2.38
ABCA4P78363 EIF1P4-201ENST00000572664 335 ntBASIC0.2□□□□□ -2.38
ABCA4P78363 AC007363.1-201ENST00000604736 620 ntBASIC0.2□□□□□ -2.38
ABCA4P78363 AC092574.1-201ENST00000609771 420 ntBASIC0.2□□□□□ -2.38
ABCA4P78363 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.2□□□□□ -2.38
ABCA4P78363 RPS3AP37-201ENST00000419176 745 ntBASIC0.2□□□□□ -2.38
ABCA4P78363 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.2□□□□□ -2.38
ABCA4P78363 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.2□□□□□ -2.38
ABCA4P78363 AC067940.1-201ENST00000458411 300 ntBASIC0.2□□□□□ -2.38
ABCA4P78363 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.2□□□□□ -2.38
ABCA4P78363 AC010587.2-201ENST00000511727 448 ntBASIC0.2□□□□□ -2.38
ABCA4P78363 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.2□□□□□ -2.38
ABCA4P78363 AC078795.2-201ENST00000602835 1252 ntBASIC0.2□□□□□ -2.38
ABCA4P78363 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.2□□□□□ -2.38
ABCA4P78363 Y_RNA.18-201ENST00000362461 102 ntBASIC0.19□□□□□ -2.38
ABCA4P78363 AL079342.2-201ENST00000403367 482 ntBASIC0.19□□□□□ -2.38
ABCA4P78363 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.19□□□□□ -2.38
ABCA4P78363 MTCO3P41-201ENST00000414801 328 ntBASIC0.19□□□□□ -2.38
ABCA4P78363 AC123900.1-201ENST00000420390 96 ntBASIC0.19□□□□□ -2.38
ABCA4P78363 RPL23AP95-201ENST00000426806 265 ntBASIC0.19□□□□□ -2.38
ABCA4P78363 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.19□□□□□ -2.38
ABCA4P78363 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.19□□□□□ -2.38
ABCA4P78363 HMGN1P12-201ENST00000499125 195 ntBASIC0.19□□□□□ -2.38
ABCA4P78363 RNU6-914P-201ENST00000516749 109 ntBASIC0.19□□□□□ -2.38
ABCA4P78363 SUMO2P16-201ENST00000519475 264 ntBASIC0.19□□□□□ -2.38
ABCA4P78363 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.19□□□□□ -2.38
ABCA4P78363 AC174048.1-201ENST00000603389 144 ntBASIC0.19□□□□□ -2.38
ABCA4P78363 AL356094.1-201ENST00000624663 1212 ntBASIC0.19□□□□□ -2.38
ABCA4P78363 AC068647.2-201ENST00000637380 353 ntBASIC0.19□□□□□ -2.38
ABCA4P78363 Y_RNA.35-201ENST00000362601 101 ntBASIC0.18□□□□□ -2.38
ABCA4P78363 RNU4-67P-201ENST00000364569 141 ntBASIC0.18□□□□□ -2.38
ABCA4P78363 RNU6-945P-201ENST00000383947 107 ntBASIC0.18□□□□□ -2.38
ABCA4P78363 RNU6-142P-201ENST00000384019 107 ntBASIC0.18□□□□□ -2.38
ABCA4P78363 MTND4P20-201ENST00000424125 869 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms