Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC136475.10-201ENST00000620253 385 ntBASIC0.48□□□□□ -2.33
HIST1H3AP68431 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
HIST1H3AP68431 RNU6-43P-201ENST00000384302 107 ntBASIC0.47□□□□□ -2.33
HIST1H3AP68431 RNA5SP201-201ENST00000410316 124 ntBASIC0.47□□□□□ -2.33
HIST1H3AP68431 RNU6-293P-201ENST00000411259 106 ntBASIC0.47□□□□□ -2.33
HIST1H3AP68431 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.47□□□□□ -2.33
HIST1H3AP68431 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.47□□□□□ -2.33
HIST1H3AP68431 AC010975.2-201ENST00000427781 588 ntBASIC0.47□□□□□ -2.33
HIST1H3AP68431 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.47□□□□□ -2.33
HIST1H3AP68431 SNORD79.1-201ENST00000516069 84 ntBASIC0.47□□□□□ -2.33
HIST1H3AP68431 MTATP6P15-201ENST00000527233 835 ntBASIC0.47□□□□□ -2.33
HIST1H3AP68431 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.47□□□□□ -2.33
HIST1H3AP68431 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.47□□□□□ -2.33
HIST1H3AP68431 MIR5697-201ENST00000578045 78 ntBASIC0.47□□□□□ -2.33
HIST1H3AP68431 MIR5692A1-201ENST00000580523 69 ntBASIC0.47□□□□□ -2.33
HIST1H3AP68431 MIR4714-201ENST00000580728 77 ntBASIC0.47□□□□□ -2.33
HIST1H3AP68431 MIR4452-201ENST00000583004 71 ntBASIC0.47□□□□□ -2.33
HIST1H3AP68431 AL606834.3-201ENST00000602615 496 ntBASIC0.47□□□□□ -2.33
HIST1H3AP68431 AL353149.1-201ENST00000610667 244 ntBASIC0.47□□□□□ -2.33
HIST1H3AP68431 AC006927.4-201ENST00000639187 543 ntBASIC0.47□□□□□ -2.33
HIST1H3AP68431 RNU6-1141P-201ENST00000364520 107 ntBASIC0.46□□□□□ -2.34
HIST1H3AP68431 RNU6-534P-201ENST00000364877 106 ntBASIC0.46□□□□□ -2.34
HIST1H3AP68431 SNORA72.2-201ENST00000365028 127 ntBASIC0.46□□□□□ -2.34
HIST1H3AP68431 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.46□□□□□ -2.34
HIST1H3AP68431 RPS20P2-201ENST00000402520 389 ntBASIC0.46□□□□□ -2.34
HIST1H3AP68431 MIR548J-201ENST00000408833 112 ntBASIC0.46□□□□□ -2.34
HIST1H3AP68431 AC114491.1-201ENST00000416095 246 ntBASIC0.46□□□□□ -2.34
HIST1H3AP68431 AL353777.1-201ENST00000425552 326 ntBASIC0.46□□□□□ -2.34
HIST1H3AP68431 TAF9P1-201ENST00000445421 515 ntBASIC0.46□□□□□ -2.34
HIST1H3AP68431 TAF9P2-201ENST00000454958 515 ntBASIC0.46□□□□□ -2.34
HIST1H3AP68431 AC092991.1-201ENST00000477176 376 ntBASIC0.46□□□□□ -2.34
HIST1H3AP68431 COX6CP6-201ENST00000490840 228 ntBASIC0.46□□□□□ -2.34
HIST1H3AP68431 RNU4-54P-201ENST00000516428 129 ntBASIC0.46□□□□□ -2.34
HIST1H3AP68431 RNA5SP121-201ENST00000516537 101 ntBASIC0.46□□□□□ -2.34
HIST1H3AP68431 RNU6-922P-201ENST00000516753 99 ntBASIC0.46□□□□□ -2.34
HIST1H3AP68431 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.46□□□□□ -2.34
HIST1H3AP68431 AC090888.2-201ENST00000559765 1144 ntBASIC0.46□□□□□ -2.34
HIST1H3AP68431 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.46□□□□□ -2.34
HIST1H3AP68431 CYP4A27P-201ENST00000567218 190 ntBASIC0.46□□□□□ -2.34
HIST1H3AP68431 MIR4307-201ENST00000582802 84 ntBASIC0.46□□□□□ -2.34
HIST1H3AP68431 AL512605.2-201ENST00000592972 256 ntBASIC0.46□□□□□ -2.34
HIST1H3AP68431 AL929325.1-201ENST00000603096 117 ntBASIC0.46□□□□□ -2.34
HIST1H3AP68431 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.46□□□□□ -2.34
HIST1H3AP68431 AC021506.2-201ENST00000612354 169 ntBASIC0.46□□□□□ -2.34
HIST1H3AP68431 PCGEM1.1-201ENST00000613431 131 ntBASIC0.46□□□□□ -2.34
HIST1H3AP68431 MIR6788-201ENST00000618842 66 ntBASIC0.46□□□□□ -2.34
HIST1H3AP68431 AC106858.1-201ENST00000637497 429 ntBASIC0.46□□□□□ -2.34
HIST1H3AP68431 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
HIST1H3AP68431 AL442644.1-201ENST00000454390 3105 ntBASIC0.45□□□□□ -2.34
HIST1H3AP68431 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.45□□□□□ -2.34
HIST1H3AP68431 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
HIST1H3AP68431 AL391994.1-201ENST00000254724 282 ntBASIC0.45□□□□□ -2.34
HIST1H3AP68431 RNA5SP499-201ENST00000363982 119 ntBASIC0.45□□□□□ -2.34
HIST1H3AP68431 RNU6-371P-201ENST00000364283 108 ntBASIC0.45□□□□□ -2.34
HIST1H3AP68431 SNORD116.1-201ENST00000365628 92 ntBASIC0.45□□□□□ -2.34
HIST1H3AP68431 RNU6-692P-201ENST00000384496 107 ntBASIC0.45□□□□□ -2.34
HIST1H3AP68431 EEF1A1P40-201ENST00000412883 573 ntBASIC0.45□□□□□ -2.34
HIST1H3AP68431 RPL23AP95-201ENST00000426806 265 ntBASIC0.45□□□□□ -2.34
HIST1H3AP68431 MTND1P32-201ENST00000433043 938 ntBASIC0.45□□□□□ -2.34
HIST1H3AP68431 AC073614.1-201ENST00000438690 650 ntBASIC0.45□□□□□ -2.34
HIST1H3AP68431 AC245047.7-201ENST00000440265 293 ntBASIC0.45□□□□□ -2.34
HIST1H3AP68431 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.45□□□□□ -2.34
HIST1H3AP68431 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.45□□□□□ -2.34
HIST1H3AP68431 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.45□□□□□ -2.34
HIST1H3AP68431 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.45□□□□□ -2.34
HIST1H3AP68431 AC091435.1-201ENST00000505442 584 ntBASIC0.45□□□□□ -2.34
HIST1H3AP68431 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.45□□□□□ -2.34
HIST1H3AP68431 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.45□□□□□ -2.34
HIST1H3AP68431 MIR4742-201ENST00000581069 85 ntBASIC0.45□□□□□ -2.34
HIST1H3AP68431 AC016727.2-201ENST00000603988 621 ntBASIC0.45□□□□□ -2.34
HIST1H3AP68431 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.45□□□□□ -2.34
HIST1H3AP68431 AL157786.1-207ENST00000627771 695 ntBASIC0.45□□□□□ -2.34
HIST1H3AP68431 MIR338-201ENST00000636369 67 ntBASIC0.45□□□□□ -2.34
HIST1H3AP68431 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
HIST1H3AP68431 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
HIST1H3AP68431 SNORD56.2-201ENST00000363242 71 ntBASIC0.44□□□□□ -2.34
HIST1H3AP68431 SNORA33-201ENST00000363664 130 ntBASIC0.44□□□□□ -2.34
HIST1H3AP68431 SNORD18A-201ENST00000363753 72 ntBASIC0.44□□□□□ -2.34
HIST1H3AP68431 SNORA25.9-201ENST00000365087 128 ntBASIC0.44□□□□□ -2.34
HIST1H3AP68431 RNU6-418P-201ENST00000384035 107 ntBASIC0.44□□□□□ -2.34
HIST1H3AP68431 RNU6-1054P-201ENST00000411293 104 ntBASIC0.44□□□□□ -2.34
HIST1H3AP68431 RPL22P18-201ENST00000417197 377 ntBASIC0.44□□□□□ -2.34
HIST1H3AP68431 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.44□□□□□ -2.34
HIST1H3AP68431 AC092628.1-201ENST00000436250 252 ntBASIC0.44□□□□□ -2.34
HIST1H3AP68431 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.44□□□□□ -2.34
HIST1H3AP68431 C1DP4-201ENST00000455429 424 ntBASIC0.44□□□□□ -2.34
HIST1H3AP68431 RPS23P5-201ENST00000495419 428 ntBASIC0.44□□□□□ -2.34
HIST1H3AP68431 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.44□□□□□ -2.34
HIST1H3AP68431 MTND3P25-201ENST00000509243 135 ntBASIC0.44□□□□□ -2.34
HIST1H3AP68431 RNU6-377P-201ENST00000515965 102 ntBASIC0.44□□□□□ -2.34
HIST1H3AP68431 RNU6-276P-201ENST00000516114 96 ntBASIC0.44□□□□□ -2.34
HIST1H3AP68431 SNORA19.3-201ENST00000516165 130 ntBASIC0.44□□□□□ -2.34
HIST1H3AP68431 RNU6-201P-201ENST00000517100 61 ntBASIC0.44□□□□□ -2.34
HIST1H3AP68431 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.44□□□□□ -2.34
HIST1H3AP68431 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.44□□□□□ -2.34
HIST1H3AP68431 AL031281.1-201ENST00000604049 488 ntBASIC0.44□□□□□ -2.34
HIST1H3AP68431 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.44□□□□□ -2.34
HIST1H3AP68431 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.44□□□□□ -2.34
HIST1H3AP68431 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.44□□□□□ -2.34
HIST1H3AP68431 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms