Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 SNRPFP4-201ENST00000456366 242 ntBASIC0.48□□□□□ -2.33
HIST1H2BDP58876 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.48□□□□□ -2.33
HIST1H2BDP58876 AC091874.1-201ENST00000511402 339 ntBASIC0.48□□□□□ -2.33
HIST1H2BDP58876 RNU2-34P-201ENST00000516534 121 ntBASIC0.48□□□□□ -2.33
HIST1H2BDP58876 AP003484.1-201ENST00000530974 250 ntBASIC0.48□□□□□ -2.33
HIST1H2BDP58876 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.48□□□□□ -2.33
HIST1H2BDP58876 AL353770.2-201ENST00000620024 78 ntBASIC0.48□□□□□ -2.33
HIST1H2BDP58876 AL445984.1-201ENST00000637834 659 ntBASIC0.48□□□□□ -2.33
HIST1H2BDP58876 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
HIST1H2BDP58876 RNU6-1303P-201ENST00000364841 107 ntBASIC0.47□□□□□ -2.33
HIST1H2BDP58876 SNORD115-7-201ENST00000365306 82 ntBASIC0.47□□□□□ -2.33
HIST1H2BDP58876 SNORA18.2-201ENST00000383865 132 ntBASIC0.47□□□□□ -2.33
HIST1H2BDP58876 Y_RNA.504-201ENST00000384481 104 ntBASIC0.47□□□□□ -2.33
HIST1H2BDP58876 RNU6-1031P-201ENST00000384773 107 ntBASIC0.47□□□□□ -2.33
HIST1H2BDP58876 SNORA26.9-201ENST00000391322 122 ntBASIC0.47□□□□□ -2.33
HIST1H2BDP58876 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
HIST1H2BDP58876 MIR300-201ENST00000401138 83 ntBASIC0.47□□□□□ -2.33
HIST1H2BDP58876 CYCSP49-201ENST00000420810 319 ntBASIC0.47□□□□□ -2.33
HIST1H2BDP58876 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.47□□□□□ -2.33
HIST1H2BDP58876 AC010154.1-201ENST00000425857 269 ntBASIC0.47□□□□□ -2.33
HIST1H2BDP58876 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.47□□□□□ -2.33
HIST1H2BDP58876 MTATP6P16-201ENST00000434543 526 ntBASIC0.47□□□□□ -2.33
HIST1H2BDP58876 AC245047.7-201ENST00000440265 293 ntBASIC0.47□□□□□ -2.33
HIST1H2BDP58876 RAP1BP2-201ENST00000478270 544 ntBASIC0.47□□□□□ -2.33
HIST1H2BDP58876 AC117454.1-201ENST00000491120 168 ntBASIC0.47□□□□□ -2.33
HIST1H2BDP58876 AC008628.2-201ENST00000502605 298 ntBASIC0.47□□□□□ -2.33
HIST1H2BDP58876 RNU6-567P-201ENST00000516746 107 ntBASIC0.47□□□□□ -2.33
HIST1H2BDP58876 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.47□□□□□ -2.33
HIST1H2BDP58876 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.47□□□□□ -2.33
HIST1H2BDP58876 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.47□□□□□ -2.33
HIST1H2BDP58876 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC0.47□□□□□ -2.33
HIST1H2BDP58876 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.47□□□□□ -2.33
HIST1H2BDP58876 MIR4698-201ENST00000577795 80 ntBASIC0.47□□□□□ -2.33
HIST1H2BDP58876 Z99289.3-201ENST00000605586 594 ntBASIC0.47□□□□□ -2.33
HIST1H2BDP58876 AL121992.2-201ENST00000606262 256 ntBASIC0.47□□□□□ -2.33
HIST1H2BDP58876 AL731566.2-201ENST00000618971 317 ntBASIC0.47□□□□□ -2.33
HIST1H2BDP58876 AL031667.3-201ENST00000620124 655 ntBASIC0.47□□□□□ -2.33
HIST1H2BDP58876 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
HIST1H2BDP58876 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
HIST1H2BDP58876 Y_RNA.18-201ENST00000362461 102 ntBASIC0.46□□□□□ -2.34
HIST1H2BDP58876 RNU6-969P-201ENST00000383900 105 ntBASIC0.46□□□□□ -2.34
HIST1H2BDP58876 AF228730.1-201ENST00000397972 663 ntBASIC0.46□□□□□ -2.34
HIST1H2BDP58876 MRPL42P2-201ENST00000403169 426 ntBASIC0.46□□□□□ -2.34
HIST1H2BDP58876 MIR1283-1-201ENST00000408494 87 ntBASIC0.46□□□□□ -2.34
HIST1H2BDP58876 Y_RNA.608-201ENST00000410647 95 ntBASIC0.46□□□□□ -2.34
HIST1H2BDP58876 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.46□□□□□ -2.34
HIST1H2BDP58876 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.46□□□□□ -2.34
HIST1H2BDP58876 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.46□□□□□ -2.34
HIST1H2BDP58876 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.46□□□□□ -2.34
HIST1H2BDP58876 EXOSC3P1-201ENST00000448649 500 ntBASIC0.46□□□□□ -2.34
HIST1H2BDP58876 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.46□□□□□ -2.34
HIST1H2BDP58876 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.46□□□□□ -2.34
HIST1H2BDP58876 SNORA31.10-201ENST00000516482 106 ntBASIC0.46□□□□□ -2.34
HIST1H2BDP58876 RNU6-922P-201ENST00000516753 99 ntBASIC0.46□□□□□ -2.34
HIST1H2BDP58876 DEFB131C-201ENST00000528817 165 ntBASIC0.46□□□□□ -2.34
HIST1H2BDP58876 AC091544.4-201ENST00000555268 342 ntBASIC0.46□□□□□ -2.34
HIST1H2BDP58876 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.46□□□□□ -2.34
HIST1H2BDP58876 AC091489.2-201ENST00000566263 604 ntBASIC0.46□□□□□ -2.34
HIST1H2BDP58876 MIR4443-201ENST00000585052 53 ntBASIC0.46□□□□□ -2.34
HIST1H2BDP58876 AL513534.2-201ENST00000603836 250 ntBASIC0.46□□□□□ -2.34
HIST1H2BDP58876 AL359999.1-201ENST00000604513 294 ntBASIC0.46□□□□□ -2.34
HIST1H2BDP58876 AC064807.4-201ENST00000607201 407 ntBASIC0.46□□□□□ -2.34
HIST1H2BDP58876 AC008250.2-201ENST00000615261 205 ntBASIC0.46□□□□□ -2.34
HIST1H2BDP58876 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.46□□□□□ -2.34
HIST1H2BDP58876 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
HIST1H2BDP58876 RNU6-562P-201ENST00000362731 107 ntBASIC0.45□□□□□ -2.34
HIST1H2BDP58876 RNU6-950P-201ENST00000384651 107 ntBASIC0.45□□□□□ -2.34
HIST1H2BDP58876 AL117339.3-201ENST00000418733 162 ntBASIC0.45□□□□□ -2.34
HIST1H2BDP58876 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.45□□□□□ -2.34
HIST1H2BDP58876 RPS6P15-201ENST00000431996 751 ntBASIC0.45□□□□□ -2.34
HIST1H2BDP58876 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC0.45□□□□□ -2.34
HIST1H2BDP58876 AL606517.2-201ENST00000442855 241 ntBASIC0.45□□□□□ -2.34
HIST1H2BDP58876 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.45□□□□□ -2.34
HIST1H2BDP58876 AL031313.1-201ENST00000448435 256 ntBASIC0.45□□□□□ -2.34
HIST1H2BDP58876 AC016717.1-201ENST00000448918 286 ntBASIC0.45□□□□□ -2.34
HIST1H2BDP58876 AL157398.1-201ENST00000452981 186 ntBASIC0.45□□□□□ -2.34
HIST1H2BDP58876 AC105758.1-201ENST00000506038 399 ntBASIC0.45□□□□□ -2.34
HIST1H2BDP58876 AC116562.3-201ENST00000506136 177 ntBASIC0.45□□□□□ -2.34
HIST1H2BDP58876 AF131216.2-201ENST00000512316 564 ntBASIC0.45□□□□□ -2.34
HIST1H2BDP58876 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.45□□□□□ -2.34
HIST1H2BDP58876 LRRC34P2-201ENST00000514850 553 ntBASIC0.45□□□□□ -2.34
HIST1H2BDP58876 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.45□□□□□ -2.34
HIST1H2BDP58876 RNU6-1220P-201ENST00000517126 108 ntBASIC0.45□□□□□ -2.34
HIST1H2BDP58876 AC022616.3-201ENST00000523940 148 ntBASIC0.45□□□□□ -2.34
HIST1H2BDP58876 AC068587.5-201ENST00000528506 175 ntBASIC0.45□□□□□ -2.34
HIST1H2BDP58876 MIR4753-201ENST00000585119 83 ntBASIC0.45□□□□□ -2.34
HIST1H2BDP58876 AC068790.6-201ENST00000602558 258 ntBASIC0.45□□□□□ -2.34
HIST1H2BDP58876 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.45□□□□□ -2.34
HIST1H2BDP58876 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.45□□□□□ -2.34
HIST1H2BDP58876 SNORA43.4-201ENST00000629559 138 ntBASIC0.45□□□□□ -2.34
HIST1H2BDP58876 AL391994.1-201ENST00000254724 282 ntBASIC0.44□□□□□ -2.34
HIST1H2BDP58876 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
HIST1H2BDP58876 SNORA7.1-201ENST00000363750 139 ntBASIC0.44□□□□□ -2.34
HIST1H2BDP58876 SNORD46.1-201ENST00000364139 104 ntBASIC0.44□□□□□ -2.34
HIST1H2BDP58876 Y_RNA.287-201ENST00000364853 94 ntBASIC0.44□□□□□ -2.34
HIST1H2BDP58876 RNU6-715P-201ENST00000365204 103 ntBASIC0.44□□□□□ -2.34
HIST1H2BDP58876 RNU6-505P-201ENST00000384427 107 ntBASIC0.44□□□□□ -2.34
HIST1H2BDP58876 RNU6-83P-201ENST00000384568 112 ntBASIC0.44□□□□□ -2.34
HIST1H2BDP58876 RNU6-417P-201ENST00000384712 107 ntBASIC0.44□□□□□ -2.34
HIST1H2BDP58876 RNU6-482P-201ENST00000391068 107 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms