Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 U4atac.1-201ENST00000618345 95 ntBASIC2.03□□□□□ -2.08
HMGCS2P54868 AC024581.2-201ENST00000619986 252 ntBASIC2.03□□□□□ -2.08
HMGCS2P54868 AL136221.1-201ENST00000621449 509 ntBASIC2.03□□□□□ -2.08
HMGCS2P54868 AC012640.5-201ENST00000623897 319 ntBASIC2.03□□□□□ -2.08
HMGCS2P54868 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.03□□□□□ -2.08
HMGCS2P54868 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.03□□□□□ -2.09
HMGCS2P54868 Y_RNA.86-201ENST00000363020 111 ntBASIC2.02□□□□□ -2.09
HMGCS2P54868 RNU6-1252P-201ENST00000363054 104 ntBASIC2.02□□□□□ -2.09
HMGCS2P54868 RNU6-529P-201ENST00000363383 104 ntBASIC2.02□□□□□ -2.09
HMGCS2P54868 RNU6-831P-201ENST00000384548 107 ntBASIC2.02□□□□□ -2.09
HMGCS2P54868 MIR450B-201ENST00000401182 78 ntBASIC2.02□□□□□ -2.09
HMGCS2P54868 RNU2-63P-201ENST00000410792 194 ntBASIC2.02□□□□□ -2.09
HMGCS2P54868 RNU6-321P-201ENST00000410912 106 ntBASIC2.02□□□□□ -2.09
HMGCS2P54868 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.02□□□□□ -2.09
HMGCS2P54868 AL365400.1-201ENST00000431854 640 ntBASIC2.02□□□□□ -2.09
HMGCS2P54868 AL359672.1-201ENST00000442302 409 ntBASIC2.02□□□□□ -2.09
HMGCS2P54868 AL031274.1-201ENST00000450334 232 ntBASIC2.02□□□□□ -2.09
HMGCS2P54868 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.02□□□□□ -2.09
HMGCS2P54868 AC112771.1-201ENST00000463581 102 ntBASIC2.02□□□□□ -2.09
HMGCS2P54868 RPL36AP48-201ENST00000485521 314 ntBASIC2.02□□□□□ -2.09
HMGCS2P54868 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.02□□□□□ -2.09
HMGCS2P54868 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.02□□□□□ -2.09
HMGCS2P54868 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.02□□□□□ -2.09
HMGCS2P54868 IGLV3-17-201ENST00000519099 244 ntBASIC2.02□□□□□ -2.09
HMGCS2P54868 AC025423.5-201ENST00000550230 219 ntBASIC2.02□□□□□ -2.09
HMGCS2P54868 AC007375.1-201ENST00000554513 578 ntBASIC2.02□□□□□ -2.09
HMGCS2P54868 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.02□□□□□ -2.09
HMGCS2P54868 MIR4255-201ENST00000579351 72 ntBASIC2.02□□□□□ -2.09
HMGCS2P54868 MIR3672-201ENST00000584290 82 ntBASIC2.02□□□□□ -2.09
HMGCS2P54868 ELOCP5-201ENST00000604924 333 ntBASIC2.02□□□□□ -2.09
HMGCS2P54868 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HMGCS2P54868 AL161423.1-201ENST00000613700 262 ntBASIC2.02□□□□□ -2.09
HMGCS2P54868 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
HMGCS2P54868 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.02□□□□□ -2.09
HMGCS2P54868 AL596028.1-201ENST00000326971 197 ntBASIC2.01□□□□□ -2.09
HMGCS2P54868 Y_RNA.40-201ENST00000362645 93 ntBASIC2.01□□□□□ -2.09
HMGCS2P54868 RNU6-1010P-201ENST00000362757 107 ntBASIC2.01□□□□□ -2.09
HMGCS2P54868 Y_RNA.100-201ENST00000363141 102 ntBASIC2.01□□□□□ -2.09
HMGCS2P54868 RNU6-1329P-201ENST00000365664 107 ntBASIC2.01□□□□□ -2.09
HMGCS2P54868 Y_RNA.390-201ENST00000383932 102 ntBASIC2.01□□□□□ -2.09
HMGCS2P54868 Y_RNA.414-201ENST00000384011 101 ntBASIC2.01□□□□□ -2.09
HMGCS2P54868 SNORA51.11-201ENST00000384442 131 ntBASIC2.01□□□□□ -2.09
HMGCS2P54868 SNORA67.5-201ENST00000391036 107 ntBASIC2.01□□□□□ -2.09
HMGCS2P54868 SNORD23.1-201ENST00000408212 104 ntBASIC2.01□□□□□ -2.09
HMGCS2P54868 RNA5SP390-201ENST00000410191 113 ntBASIC2.01□□□□□ -2.09
HMGCS2P54868 RNA5SP338-201ENST00000410495 85 ntBASIC2.01□□□□□ -2.09
HMGCS2P54868 MTND1P23-201ENST00000416931 372 ntBASIC2.01□□□□□ -2.09
HMGCS2P54868 AC097463.2-201ENST00000421074 142 ntBASIC2.01□□□□□ -2.09
HMGCS2P54868 MTCO3P18-201ENST00000440206 761 ntBASIC2.01□□□□□ -2.09
HMGCS2P54868 IPO7P1-201ENST00000442031 636 ntBASIC2.01□□□□□ -2.09
HMGCS2P54868 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.01□□□□□ -2.09
HMGCS2P54868 AC018437.1-201ENST00000492214 406 ntBASIC2.01□□□□□ -2.09
HMGCS2P54868 AC090255.1-201ENST00000495779 349 ntBASIC2.01□□□□□ -2.09
HMGCS2P54868 MTCO2P30-201ENST00000503662 364 ntBASIC2.01□□□□□ -2.09
HMGCS2P54868 RNU6-1332P-201ENST00000516666 104 ntBASIC2.01□□□□□ -2.09
HMGCS2P54868 AC107953.1-201ENST00000522216 297 ntBASIC2.01□□□□□ -2.09
HMGCS2P54868 AP000763.2-201ENST00000540641 163 ntBASIC2.01□□□□□ -2.09
HMGCS2P54868 MIR3942-201ENST00000585264 109 ntBASIC2.01□□□□□ -2.09
HMGCS2P54868 AC018638.8-201ENST00000588755 281 ntBASIC2.01□□□□□ -2.09
HMGCS2P54868 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.01□□□□□ -2.09
HMGCS2P54868 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HMGCS2P54868 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.01□□□□□ -2.09
HMGCS2P54868 Z75746.1-201ENST00000440243 2080 ntBASIC2.01□□□□□ -2.09
HMGCS2P54868 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
HMGCS2P54868 RNU6-527P-201ENST00000363425 104 ntBASIC2□□□□□ -2.09
HMGCS2P54868 SNORD113-7-201ENST00000363762 77 ntBASIC2□□□□□ -2.09
HMGCS2P54868 RNU6-692P-201ENST00000384496 107 ntBASIC2□□□□□ -2.09
HMGCS2P54868 AL355497.1-201ENST00000406262 551 ntBASIC2□□□□□ -2.09
HMGCS2P54868 RNU6-293P-201ENST00000411259 106 ntBASIC2□□□□□ -2.09
HMGCS2P54868 VN1R36P-201ENST00000414936 291 ntBASIC2□□□□□ -2.09
HMGCS2P54868 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2□□□□□ -2.09
HMGCS2P54868 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2□□□□□ -2.09
HMGCS2P54868 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2□□□□□ -2.09
HMGCS2P54868 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2□□□□□ -2.09
HMGCS2P54868 MTCO2P3-201ENST00000442543 421 ntBASIC2□□□□□ -2.09
HMGCS2P54868 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2□□□□□ -2.09
HMGCS2P54868 AC008628.2-201ENST00000502605 298 ntBASIC2□□□□□ -2.09
HMGCS2P54868 AC018710.1-201ENST00000506509 158 ntBASIC2□□□□□ -2.09
HMGCS2P54868 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2□□□□□ -2.09
HMGCS2P54868 RPL39P5-202ENST00000512505 151 ntBASIC2□□□□□ -2.09
HMGCS2P54868 SMURF2P1-201ENST00000514992 481 ntBASIC2□□□□□ -2.09
HMGCS2P54868 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2□□□□□ -2.09
HMGCS2P54868 AC100830.2-201ENST00000581636 240 ntBASIC2□□□□□ -2.09
HMGCS2P54868 AC078899.2-201ENST00000595282 212 ntBASIC2□□□□□ -2.09
HMGCS2P54868 AL138726.1-201ENST00000614873 333 ntBASIC2□□□□□ -2.09
HMGCS2P54868 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2□□□□□ -2.09
HMGCS2P54868 AL159153.1-201ENST00000619688 317 ntBASIC2□□□□□ -2.09
HMGCS2P54868 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
HMGCS2P54868 CASC19-280ENST00000642102 1351 ntBASIC1.99□□□□□ -2.09
HMGCS2P54868 Y_RNA.135-201ENST00000363439 95 ntBASIC1.99□□□□□ -2.09
HMGCS2P54868 RNA5SP240-201ENST00000365355 128 ntBASIC1.99□□□□□ -2.09
HMGCS2P54868 RNA5SP37-201ENST00000365420 130 ntBASIC1.99□□□□□ -2.09
HMGCS2P54868 AL356776.1-201ENST00000406574 447 ntBASIC1.99□□□□□ -2.09
HMGCS2P54868 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.99□□□□□ -2.09
HMGCS2P54868 AC008267.5-201ENST00000424928 265 ntBASIC1.99□□□□□ -2.09
HMGCS2P54868 WARS2P1-201ENST00000429678 537 ntBASIC1.99□□□□□ -2.09
HMGCS2P54868 AL591043.1-201ENST00000432461 424 ntBASIC1.99□□□□□ -2.09
HMGCS2P54868 SNAP23P1-201ENST00000433229 246 ntBASIC1.99□□□□□ -2.09
HMGCS2P54868 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.99□□□□□ -2.09
HMGCS2P54868 AL031659.1-201ENST00000447075 539 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms