Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 C1DP2-201ENST00000418167 426 ntBASIC0.16□□□□□ -2.38
GTF2A1P52655 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.16□□□□□ -2.38
GTF2A1P52655 FABP5P4-201ENST00000437203 171 ntBASIC0.16□□□□□ -2.38
GTF2A1P52655 AL117351.1-201ENST00000438864 766 ntBASIC0.16□□□□□ -2.38
GTF2A1P52655 RPEP5-201ENST00000441137 268 ntBASIC0.16□□□□□ -2.38
GTF2A1P52655 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.16□□□□□ -2.38
GTF2A1P52655 C1DP4-201ENST00000455429 424 ntBASIC0.16□□□□□ -2.38
GTF2A1P52655 AC007547.1-201ENST00000462177 490 ntBASIC0.16□□□□□ -2.38
GTF2A1P52655 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.16□□□□□ -2.38
GTF2A1P52655 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
GTF2A1P52655 AC064872.1-201ENST00000604823 1072 ntBASIC0.16□□□□□ -2.38
GTF2A1P52655 AC245297.2-201ENST00000610119 565 ntBASIC0.16□□□□□ -2.38
GTF2A1P52655 AC092106.3-201ENST00000611308 722 ntBASIC0.16□□□□□ -2.38
GTF2A1P52655 MIR6513-201ENST00000621188 64 ntBASIC0.16□□□□□ -2.38
GTF2A1P52655 Y_RNA.192-201ENST00000363977 102 ntBASIC0.15□□□□□ -2.39
GTF2A1P52655 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
GTF2A1P52655 RNA5SP109-201ENST00000391010 116 ntBASIC0.15□□□□□ -2.39
GTF2A1P52655 SNORA75.2-201ENST00000391138 150 ntBASIC0.15□□□□□ -2.39
GTF2A1P52655 SNORA75.3-201ENST00000391231 150 ntBASIC0.15□□□□□ -2.39
GTF2A1P52655 SNORD99-201ENST00000408612 74 ntBASIC0.15□□□□□ -2.39
GTF2A1P52655 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.15□□□□□ -2.39
GTF2A1P52655 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.15□□□□□ -2.39
GTF2A1P52655 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.15□□□□□ -2.39
GTF2A1P52655 AL049829.1-201ENST00000465411 156 ntBASIC0.15□□□□□ -2.39
GTF2A1P52655 AL163973.1-201ENST00000484753 577 ntBASIC0.15□□□□□ -2.39
GTF2A1P52655 AC022493.2-201ENST00000506122 481 ntBASIC0.15□□□□□ -2.39
GTF2A1P52655 AC021146.8-201ENST00000507455 733 ntBASIC0.15□□□□□ -2.39
GTF2A1P52655 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.15□□□□□ -2.39
GTF2A1P52655 RNU1-86P-201ENST00000516108 154 ntBASIC0.15□□□□□ -2.39
GTF2A1P52655 RNU5F-4P-201ENST00000516581 114 ntBASIC0.15□□□□□ -2.39
GTF2A1P52655 RNU1-107P-201ENST00000516617 154 ntBASIC0.15□□□□□ -2.39
GTF2A1P52655 MTND2P7-201ENST00000521337 640 ntBASIC0.15□□□□□ -2.39
GTF2A1P52655 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.15□□□□□ -2.39
GTF2A1P52655 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.15□□□□□ -2.39
GTF2A1P52655 BCRP9-201ENST00000605312 388 ntBASIC0.15□□□□□ -2.39
GTF2A1P52655 AC006927.4-201ENST00000639187 543 ntBASIC0.15□□□□□ -2.39
GTF2A1P52655 RNU6-349P-201ENST00000362402 107 ntBASIC0.14□□□□□ -2.39
GTF2A1P52655 Y_RNA.311-201ENST00000365068 96 ntBASIC0.14□□□□□ -2.39
GTF2A1P52655 RNU5E-7P-201ENST00000365290 117 ntBASIC0.14□□□□□ -2.39
GTF2A1P52655 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.14□□□□□ -2.39
GTF2A1P52655 USP9YP21-201ENST00000420603 432 ntBASIC0.14□□□□□ -2.39
GTF2A1P52655 AL606662.1-201ENST00000445763 553 ntBASIC0.14□□□□□ -2.39
GTF2A1P52655 AL360271.2-201ENST00000447710 161 ntBASIC0.14□□□□□ -2.39
GTF2A1P52655 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.14□□□□□ -2.39
GTF2A1P52655 RNU7-90P-201ENST00000459216 62 ntBASIC0.14□□□□□ -2.39
GTF2A1P52655 AL049830.1-201ENST00000468034 425 ntBASIC0.14□□□□□ -2.39
GTF2A1P52655 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.14□□□□□ -2.39
GTF2A1P52655 SNORA31.10-201ENST00000516482 106 ntBASIC0.14□□□□□ -2.39
GTF2A1P52655 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.14□□□□□ -2.39
GTF2A1P52655 AC087883.1-201ENST00000551882 391 ntBASIC0.14□□□□□ -2.39
GTF2A1P52655 AL390123.1-201ENST00000603216 237 ntBASIC0.14□□□□□ -2.39
GTF2A1P52655 MTATP6P2-201ENST00000603319 678 ntBASIC0.14□□□□□ -2.39
GTF2A1P52655 AL596327.1-201ENST00000603629 213 ntBASIC0.14□□□□□ -2.39
GTF2A1P52655 AL360219.1-201ENST00000610230 366 ntBASIC0.14□□□□□ -2.39
GTF2A1P52655 PCGEM1.1-201ENST00000613431 131 ntBASIC0.14□□□□□ -2.39
GTF2A1P52655 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.14□□□□□ -2.39
GTF2A1P52655 AC106754.2-201ENST00000623006 233 ntBASIC0.14□□□□□ -2.39
GTF2A1P52655 AP002782.1-201ENST00000623107 614 ntBASIC0.14□□□□□ -2.39
GTF2A1P52655 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.14□□□□□ -2.39
GTF2A1P52655 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.14□□□□□ -2.39
GTF2A1P52655 CASC19-280ENST00000642102 1351 ntBASIC0.14□□□□□ -2.39
GTF2A1P52655 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
GTF2A1P52655 BX322639.1-202ENST00000423987 2213 ntBASIC0.13□□□□□ -2.39
GTF2A1P52655 MIRLET7D-201ENST00000362263 87 ntBASIC0.13□□□□□ -2.39
GTF2A1P52655 RNU6-462P-201ENST00000362659 105 ntBASIC0.13□□□□□ -2.39
GTF2A1P52655 RNU6-769P-201ENST00000384407 104 ntBASIC0.13□□□□□ -2.39
GTF2A1P52655 Y_RNA.578-201ENST00000390903 88 ntBASIC0.13□□□□□ -2.39
GTF2A1P52655 RNA5SP193-201ENST00000410353 107 ntBASIC0.13□□□□□ -2.39
GTF2A1P52655 AL590135.1-201ENST00000422215 156 ntBASIC0.13□□□□□ -2.39
GTF2A1P52655 AC019205.3-201ENST00000424573 156 ntBASIC0.13□□□□□ -2.39
GTF2A1P52655 AC010154.1-201ENST00000425857 269 ntBASIC0.13□□□□□ -2.39
GTF2A1P52655 DAP3P1-201ENST00000441522 278 ntBASIC0.13□□□□□ -2.39
GTF2A1P52655 AL606517.2-201ENST00000442855 241 ntBASIC0.13□□□□□ -2.39
GTF2A1P52655 AC016700.2-201ENST00000446011 156 ntBASIC0.13□□□□□ -2.39
GTF2A1P52655 AL031313.1-201ENST00000448435 256 ntBASIC0.13□□□□□ -2.39
GTF2A1P52655 SRRM1P2-201ENST00000464531 1192 ntBASIC0.13□□□□□ -2.39
GTF2A1P52655 AP000797.1-201ENST00000478870 387 ntBASIC0.13□□□□□ -2.39
GTF2A1P52655 AC015911.1-201ENST00000495111 156 ntBASIC0.13□□□□□ -2.39
GTF2A1P52655 AC108740.1-201ENST00000498629 225 ntBASIC0.13□□□□□ -2.39
GTF2A1P52655 AC109445.1-201ENST00000512356 383 ntBASIC0.13□□□□□ -2.39
GTF2A1P52655 RNU6-947P-201ENST00000516264 106 ntBASIC0.13□□□□□ -2.39
GTF2A1P52655 RNU6-1223P-201ENST00000517124 104 ntBASIC0.13□□□□□ -2.39
GTF2A1P52655 RNU6-1028P-201ENST00000517164 93 ntBASIC0.13□□□□□ -2.39
GTF2A1P52655 AP002453.2-201ENST00000533503 320 ntBASIC0.13□□□□□ -2.39
GTF2A1P52655 MIR4711-201ENST00000578274 70 ntBASIC0.13□□□□□ -2.39
GTF2A1P52655 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.13□□□□□ -2.39
GTF2A1P52655 AL606834.3-201ENST00000602615 496 ntBASIC0.13□□□□□ -2.39
GTF2A1P52655 AL078603.1-201ENST00000603824 313 ntBASIC0.13□□□□□ -2.39
GTF2A1P52655 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.13□□□□□ -2.39
GTF2A1P52655 AL359547.2-201ENST00000615810 418 ntBASIC0.13□□□□□ -2.39
GTF2A1P52655 MIR8070-201ENST00000616510 88 ntBASIC0.13□□□□□ -2.39
GTF2A1P52655 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
GTF2A1P52655 MTND4P5-201ENST00000435821 1374 ntBASIC0.12□□□□□ -2.39
GTF2A1P52655 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
GTF2A1P52655 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
GTF2A1P52655 AC090625.1-201ENST00000357130 210 ntBASIC0.12□□□□□ -2.39
GTF2A1P52655 RNU6-527P-201ENST00000363425 104 ntBASIC0.12□□□□□ -2.39
GTF2A1P52655 U3.9-201ENST00000363823 204 ntBASIC0.12□□□□□ -2.39
GTF2A1P52655 RNU6-105P-201ENST00000363909 104 ntBASIC0.12□□□□□ -2.39
GTF2A1P52655 SNORD116-13-201ENST00000384408 92 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 195.7 ms