Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 AC009831.4-201ENST00000620744 325 ntBASIC2.15□□□□□ -2.07
RAB28P51157 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.15□□□□□ -2.07
RAB28P51157 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
RAB28P51157 SNORD14D-201ENST00000384390 87 ntBASIC2.14□□□□□ -2.07
RAB28P51157 SNORA40.19-201ENST00000390846 128 ntBASIC2.14□□□□□ -2.07
RAB28P51157 RN7SKP223-201ENST00000410582 62 ntBASIC2.14□□□□□ -2.07
RAB28P51157 ZNF885P-201ENST00000420174 1098 ntBASIC2.14□□□□□ -2.07
RAB28P51157 AC245102.2-201ENST00000448956 180 ntBASIC2.14□□□□□ -2.07
RAB28P51157 AC132942.1-201ENST00000486753 483 ntBASIC2.14□□□□□ -2.07
RAB28P51157 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.14□□□□□ -2.07
RAB28P51157 AC011352.1-201ENST00000512300 793 ntBASIC2.14□□□□□ -2.07
RAB28P51157 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.14□□□□□ -2.07
RAB28P51157 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.14□□□□□ -2.07
RAB28P51157 RNA5SP402-201ENST00000517148 110 ntBASIC2.14□□□□□ -2.07
RAB28P51157 AP000889.2-201ENST00000532684 490 ntBASIC2.14□□□□□ -2.07
RAB28P51157 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.14□□□□□ -2.07
RAB28P51157 CPDP1-201ENST00000579660 283 ntBASIC2.14□□□□□ -2.07
RAB28P51157 MIR4648-201ENST00000580107 72 ntBASIC2.14□□□□□ -2.07
RAB28P51157 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.14□□□□□ -2.07
RAB28P51157 AL138726.1-201ENST00000614873 333 ntBASIC2.14□□□□□ -2.07
RAB28P51157 AL160394.1-201ENST00000624765 724 ntBASIC2.14□□□□□ -2.07
RAB28P51157 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
RAB28P51157 MIR203B-201ENST00000636080 86 ntBASIC2.14□□□□□ -2.07
RAB28P51157 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RAB28P51157 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.14□□□□□ -2.07
RAB28P51157 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
RAB28P51157 RNU6-234P-201ENST00000365229 104 ntBASIC2.13□□□□□ -2.07
RAB28P51157 MIR29C-201ENST00000385231 88 ntBASIC2.13□□□□□ -2.07
RAB28P51157 AL355497.1-201ENST00000406262 551 ntBASIC2.13□□□□□ -2.07
RAB28P51157 AL357139.1-201ENST00000407792 426 ntBASIC2.13□□□□□ -2.07
RAB28P51157 RNA5SP118-201ENST00000410385 109 ntBASIC2.13□□□□□ -2.07
RAB28P51157 FCF1P9-201ENST00000412546 282 ntBASIC2.13□□□□□ -2.07
RAB28P51157 AC009161.1-201ENST00000417306 376 ntBASIC2.13□□□□□ -2.07
RAB28P51157 AL590632.1-201ENST00000424289 371 ntBASIC2.13□□□□□ -2.07
RAB28P51157 AL513185.2-201ENST00000425543 193 ntBASIC2.13□□□□□ -2.07
RAB28P51157 AL645568.3-201ENST00000433683 316 ntBASIC2.13□□□□□ -2.07
RAB28P51157 AL121890.1-201ENST00000435457 205 ntBASIC2.13□□□□□ -2.07
RAB28P51157 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.13□□□□□ -2.07
RAB28P51157 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.13□□□□□ -2.07
RAB28P51157 snoU13.6-201ENST00000458785 104 ntBASIC2.13□□□□□ -2.07
RAB28P51157 YWHAEP4-201ENST00000505390 198 ntBASIC2.13□□□□□ -2.07
RAB28P51157 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.13□□□□□ -2.07
RAB28P51157 RNU1-41P-201ENST00000516161 162 ntBASIC2.13□□□□□ -2.07
RAB28P51157 RNU1-48P-201ENST00000516400 162 ntBASIC2.13□□□□□ -2.07
RAB28P51157 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.13□□□□□ -2.07
RAB28P51157 AC016256.1-201ENST00000547971 354 ntBASIC2.13□□□□□ -2.07
RAB28P51157 EIF4A1P12-201ENST00000551910 141 ntBASIC2.13□□□□□ -2.07
RAB28P51157 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.13□□□□□ -2.07
RAB28P51157 MIR3672-201ENST00000584290 82 ntBASIC2.13□□□□□ -2.07
RAB28P51157 MIR3976-201ENST00000606807 139 ntBASIC2.13□□□□□ -2.07
RAB28P51157 AL133215.3-201ENST00000609801 448 ntBASIC2.13□□□□□ -2.07
RAB28P51157 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
RAB28P51157 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.13□□□□□ -2.07
RAB28P51157 AL136221.1-201ENST00000621449 509 ntBASIC2.13□□□□□ -2.07
RAB28P51157 AC098679.4-201ENST00000624241 654 ntBASIC2.13□□□□□ -2.07
RAB28P51157 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
RAB28P51157 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
RAB28P51157 RNU6-1159P-201ENST00000362933 107 ntBASIC2.12□□□□□ -2.07
RAB28P51157 Y_RNA.151-201ENST00000363566 112 ntBASIC2.12□□□□□ -2.07
RAB28P51157 Y_RNA.157-201ENST00000363638 102 ntBASIC2.12□□□□□ -2.07
RAB28P51157 SNORA29-201ENST00000384183 140 ntBASIC2.12□□□□□ -2.07
RAB28P51157 RNU6-790P-201ENST00000384479 105 ntBASIC2.12□□□□□ -2.07
RAB28P51157 SNORA48.3-201ENST00000391081 134 ntBASIC2.12□□□□□ -2.07
RAB28P51157 RNU6-192P-201ENST00000391253 100 ntBASIC2.12□□□□□ -2.07
RAB28P51157 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.12□□□□□ -2.07
RAB28P51157 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.12□□□□□ -2.07
RAB28P51157 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.12□□□□□ -2.07
RAB28P51157 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.12□□□□□ -2.07
RAB28P51157 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
RAB28P51157 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.12□□□□□ -2.07
RAB28P51157 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.12□□□□□ -2.07
RAB28P51157 RPS29P25-201ENST00000481709 171 ntBASIC2.12□□□□□ -2.07
RAB28P51157 RPS29P21-201ENST00000496272 170 ntBASIC2.12□□□□□ -2.07
RAB28P51157 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.12□□□□□ -2.07
RAB28P51157 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.12□□□□□ -2.07
RAB28P51157 SCARNA16.3-201ENST00000516595 184 ntBASIC2.12□□□□□ -2.07
RAB28P51157 RNU6-1314P-201ENST00000517139 104 ntBASIC2.12□□□□□ -2.07
RAB28P51157 RNA5SP490-201ENST00000517141 136 ntBASIC2.12□□□□□ -2.07
RAB28P51157 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.12□□□□□ -2.07
RAB28P51157 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.12□□□□□ -2.07
RAB28P51157 AC104984.5-201ENST00000586878 94 ntBASIC2.12□□□□□ -2.07
RAB28P51157 AC078899.2-201ENST00000595282 212 ntBASIC2.12□□□□□ -2.07
RAB28P51157 AC025754.2-201ENST00000606491 432 ntBASIC2.12□□□□□ -2.07
RAB28P51157 MIR8076-201ENST00000611401 83 ntBASIC2.12□□□□□ -2.07
RAB28P51157 AL137847.3-201ENST00000611521 109 ntBASIC2.12□□□□□ -2.07
RAB28P51157 AL359314.1-201ENST00000616913 261 ntBASIC2.12□□□□□ -2.07
RAB28P51157 AC009033.1-201ENST00000624279 431 ntBASIC2.12□□□□□ -2.07
RAB28P51157 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.12□□□□□ -2.07
RAB28P51157 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
RAB28P51157 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.12□□□□□ -2.07
RAB28P51157 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
RAB28P51157 AL596028.1-201ENST00000326971 197 ntBASIC2.11□□□□□ -2.07
RAB28P51157 MIRLET7G-201ENST00000362280 84 ntBASIC2.11□□□□□ -2.07
RAB28P51157 RNU6-562P-201ENST00000362731 107 ntBASIC2.11□□□□□ -2.07
RAB28P51157 SNORA6-201ENST00000384033 151 ntBASIC2.11□□□□□ -2.07
RAB28P51157 RNU6-968P-201ENST00000384076 107 ntBASIC2.11□□□□□ -2.07
RAB28P51157 RNU6-95P-201ENST00000384697 107 ntBASIC2.11□□□□□ -2.07
RAB28P51157 SNORA80E-201ENST00000384744 137 ntBASIC2.11□□□□□ -2.07
RAB28P51157 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
RAB28P51157 RNU6-1093P-201ENST00000391194 107 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms