Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RPS26P21-201ENST00000475397 348 ntBASIC3.56□□□□□ -1.84
MRE11P49959 AC096772.1-201ENST00000609146 564 ntBASIC3.56□□□□□ -1.84
MRE11P49959 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.56□□□□□ -1.84
MRE11P49959 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.56□□□□□ -1.84
MRE11P49959 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
MRE11P49959 Y_RNA.60-201ENST00000362831 98 ntBASIC3.55□□□□□ -1.84
MRE11P49959 RNU6-105P-201ENST00000363909 104 ntBASIC3.55□□□□□ -1.84
MRE11P49959 Y_RNA.358-201ENST00000365491 99 ntBASIC3.55□□□□□ -1.84
MRE11P49959 SNORA70B-201ENST00000384210 135 ntBASIC3.55□□□□□ -1.84
MRE11P49959 U3.37-201ENST00000408528 213 ntBASIC3.55□□□□□ -1.84
MRE11P49959 RNU6-121P-201ENST00000410525 99 ntBASIC3.55□□□□□ -1.84
MRE11P49959 AL512844.2-201ENST00000433990 593 ntBASIC3.55□□□□□ -1.84
MRE11P49959 NDUFB4P6-201ENST00000436819 366 ntBASIC3.55□□□□□ -1.84
MRE11P49959 AL603825.1-201ENST00000438481 80 ntBASIC3.55□□□□□ -1.84
MRE11P49959 RPL39P38-201ENST00000467018 153 ntBASIC3.55□□□□□ -1.84
MRE11P49959 RPL30P5-201ENST00000494923 336 ntBASIC3.55□□□□□ -1.84
MRE11P49959 AC025465.3-201ENST00000510570 311 ntBASIC3.55□□□□□ -1.84
MRE11P49959 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.55□□□□□ -1.84
MRE11P49959 RNU6-1023P-201ENST00000516137 106 ntBASIC3.55□□□□□ -1.84
MRE11P49959 RNU6-570P-201ENST00000517051 105 ntBASIC3.55□□□□□ -1.84
MRE11P49959 RNU6-1183P-201ENST00000517054 60 ntBASIC3.55□□□□□ -1.84
MRE11P49959 AC010186.2-204ENST00000537668 439 ntBASIC3.55□□□□□ -1.84
MRE11P49959 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.55□□□□□ -1.84
MRE11P49959 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.55□□□□□ -1.84
MRE11P49959 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.55□□□□□ -1.84
MRE11P49959 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.55□□□□□ -1.84
MRE11P49959 AC060766.3-201ENST00000591442 263 ntBASIC3.55□□□□□ -1.84
MRE11P49959 U2.21-201ENST00000637295 81 ntBASIC3.55□□□□□ -1.84
MRE11P49959 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
MRE11P49959 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
MRE11P49959 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
MRE11P49959 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
MRE11P49959 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
MRE11P49959 SNORA14A-201ENST00000364773 135 ntBASIC3.54□□□□□ -1.84
MRE11P49959 RNU6-217P-201ENST00000384164 104 ntBASIC3.54□□□□□ -1.84
MRE11P49959 RPL21P75-201ENST00000396599 483 ntBASIC3.54□□□□□ -1.84
MRE11P49959 RPL21P28-201ENST00000401418 483 ntBASIC3.54□□□□□ -1.84
MRE11P49959 AL079342.1-201ENST00000401460 267 ntBASIC3.54□□□□□ -1.84
MRE11P49959 AP000275.1-201ENST00000411943 390 ntBASIC3.54□□□□□ -1.84
MRE11P49959 RPL21P38-201ENST00000418090 167 ntBASIC3.54□□□□□ -1.84
MRE11P49959 AL590556.1-201ENST00000423231 483 ntBASIC3.54□□□□□ -1.84
MRE11P49959 RPL21P39-201ENST00000463605 483 ntBASIC3.54□□□□□ -1.84
MRE11P49959 AC087190.1-201ENST00000484462 480 ntBASIC3.54□□□□□ -1.84
MRE11P49959 AC107032.1-201ENST00000485945 480 ntBASIC3.54□□□□□ -1.84
MRE11P49959 AC093591.1-201ENST00000491435 481 ntBASIC3.54□□□□□ -1.84
MRE11P49959 RPL21P16-201ENST00000495531 483 ntBASIC3.54□□□□□ -1.84
MRE11P49959 SNORA43.2-201ENST00000516652 128 ntBASIC3.54□□□□□ -1.84
MRE11P49959 AC091144.1-201ENST00000519573 138 ntBASIC3.54□□□□□ -1.84
MRE11P49959 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.54□□□□□ -1.84
MRE11P49959 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
MRE11P49959 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.54□□□□□ -1.84
MRE11P49959 AL442163.3-201ENST00000554110 156 ntBASIC3.54□□□□□ -1.84
MRE11P49959 H3F3AP1-201ENST00000559984 334 ntBASIC3.54□□□□□ -1.84
MRE11P49959 AL133393.1-201ENST00000603277 287 ntBASIC3.54□□□□□ -1.84
MRE11P49959 FTX_3.1-201ENST00000610451 147 ntBASIC3.54□□□□□ -1.84
MRE11P49959 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.54□□□□□ -1.84
MRE11P49959 AL359198.2-201ENST00000611836 194 ntBASIC3.54□□□□□ -1.84
MRE11P49959 AC141273.2-201ENST00000618989 130 ntBASIC3.54□□□□□ -1.84
MRE11P49959 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.54□□□□□ -1.84
MRE11P49959 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
MRE11P49959 U3.13-201ENST00000364804 214 ntBASIC3.53□□□□□ -1.84
MRE11P49959 Y_RNA.458-201ENST00000384240 102 ntBASIC3.53□□□□□ -1.84
MRE11P49959 Y_RNA.477-201ENST00000384352 108 ntBASIC3.53□□□□□ -1.84
MRE11P49959 MIR518D-201ENST00000385014 87 ntBASIC3.53□□□□□ -1.84
MRE11P49959 RNU6-1093P-201ENST00000391194 107 ntBASIC3.53□□□□□ -1.84
MRE11P49959 BTF3L4P2-201ENST00000392798 346 ntBASIC3.53□□□□□ -1.84
MRE11P49959 AC139712.2-201ENST00000424302 339 ntBASIC3.53□□□□□ -1.84
MRE11P49959 MTATP6P7-201ENST00000453315 681 ntBASIC3.53□□□□□ -1.84
MRE11P49959 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.53□□□□□ -1.84
MRE11P49959 TRBVB-201ENST00000477100 408 ntBASIC3.53□□□□□ -1.84
MRE11P49959 RPS27AP9-201ENST00000477681 438 ntBASIC3.53□□□□□ -1.84
MRE11P49959 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.53□□□□□ -1.84
MRE11P49959 RN7SL20P-201ENST00000488827 297 ntBASIC3.53□□□□□ -1.84
MRE11P49959 AC010469.2-201ENST00000496412 480 ntBASIC3.53□□□□□ -1.84
MRE11P49959 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.53□□□□□ -1.84
MRE11P49959 AC067942.3-201ENST00000512025 362 ntBASIC3.53□□□□□ -1.84
MRE11P49959 RNU7-175P-201ENST00000515915 61 ntBASIC3.53□□□□□ -1.84
MRE11P49959 RNU1-41P-201ENST00000516161 162 ntBASIC3.53□□□□□ -1.84
MRE11P49959 RNU1-48P-201ENST00000516400 162 ntBASIC3.53□□□□□ -1.84
MRE11P49959 RNU6-1282P-201ENST00000516735 96 ntBASIC3.53□□□□□ -1.84
MRE11P49959 SNORA31.26-201ENST00000517250 137 ntBASIC3.53□□□□□ -1.84
MRE11P49959 CASP1P1-201ENST00000526345 212 ntBASIC3.53□□□□□ -1.84
MRE11P49959 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
MRE11P49959 RPL23AP78-201ENST00000599928 470 ntBASIC3.53□□□□□ -1.84
MRE11P49959 AC024153.1-201ENST00000603103 365 ntBASIC3.53□□□□□ -1.84
MRE11P49959 SDR42E1P4-201ENST00000620894 481 ntBASIC3.53□□□□□ -1.84
MRE11P49959 MTND5P6-201ENST00000422338 1798 ntBASIC3.53□□□□□ -1.84
MRE11P49959 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
MRE11P49959 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
MRE11P49959 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
MRE11P49959 RNU6-778P-201ENST00000363269 103 ntBASIC3.52□□□□□ -1.85
MRE11P49959 SNORA20.1-201ENST00000364790 130 ntBASIC3.52□□□□□ -1.85
MRE11P49959 RNU6-658P-201ENST00000384606 106 ntBASIC3.52□□□□□ -1.85
MRE11P49959 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.52□□□□□ -1.85
MRE11P49959 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.52□□□□□ -1.85
MRE11P49959 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.52□□□□□ -1.85
MRE11P49959 MTND4LP30-201ENST00000454092 297 ntBASIC3.52□□□□□ -1.85
MRE11P49959 RNU7-87P-201ENST00000459343 62 ntBASIC3.52□□□□□ -1.85
MRE11P49959 AC098869.1-201ENST00000481627 292 ntBASIC3.52□□□□□ -1.85
MRE11P49959 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms