Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RNU6-831P-201ENST00000384548 107 ntBASIC2.14□□□□□ -2.07
NEDD4P46934 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
NEDD4P46934 CBX3P9-201ENST00000402326 552 ntBASIC2.14□□□□□ -2.07
NEDD4P46934 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
NEDD4P46934 MIR1294-201ENST00000408503 142 ntBASIC2.14□□□□□ -2.07
NEDD4P46934 AP000275.1-201ENST00000411943 390 ntBASIC2.14□□□□□ -2.07
NEDD4P46934 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.14□□□□□ -2.07
NEDD4P46934 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.14□□□□□ -2.07
NEDD4P46934 CYCSP49-201ENST00000420810 319 ntBASIC2.14□□□□□ -2.07
NEDD4P46934 AC008267.5-201ENST00000424928 265 ntBASIC2.14□□□□□ -2.07
NEDD4P46934 AC078809.1-201ENST00000427601 140 ntBASIC2.14□□□□□ -2.07
NEDD4P46934 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.14□□□□□ -2.07
NEDD4P46934 AL591806.2-201ENST00000433122 173 ntBASIC2.14□□□□□ -2.07
NEDD4P46934 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.14□□□□□ -2.07
NEDD4P46934 U8.21-201ENST00000459536 136 ntBASIC2.14□□□□□ -2.07
NEDD4P46934 RPL9P9-202ENST00000466501 579 ntBASIC2.14□□□□□ -2.07
NEDD4P46934 RPL30P1-201ENST00000488676 339 ntBASIC2.14□□□□□ -2.07
NEDD4P46934 MTCO1P29-201ENST00000496868 288 ntBASIC2.14□□□□□ -2.07
NEDD4P46934 AC022447.4-201ENST00000504053 364 ntBASIC2.14□□□□□ -2.07
NEDD4P46934 AC018710.1-201ENST00000506509 158 ntBASIC2.14□□□□□ -2.07
NEDD4P46934 AC008526.1-201ENST00000509149 338 ntBASIC2.14□□□□□ -2.07
NEDD4P46934 RNA5SP182-201ENST00000516064 82 ntBASIC2.14□□□□□ -2.07
NEDD4P46934 RNU6-864P-201ENST00000516256 108 ntBASIC2.14□□□□□ -2.07
NEDD4P46934 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.14□□□□□ -2.07
NEDD4P46934 AC104576.1-201ENST00000524225 88 ntBASIC2.14□□□□□ -2.07
NEDD4P46934 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.14□□□□□ -2.07
NEDD4P46934 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.14□□□□□ -2.07
NEDD4P46934 RPL30P11-203ENST00000598995 310 ntBASIC2.14□□□□□ -2.07
NEDD4P46934 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.14□□□□□ -2.07
NEDD4P46934 AL022345.1-201ENST00000607292 135 ntBASIC2.14□□□□□ -2.07
NEDD4P46934 AP000560.1-201ENST00000624150 1937 ntBASIC2.14□□□□□ -2.07
NEDD4P46934 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
NEDD4P46934 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
NEDD4P46934 RNU6-212P-201ENST00000362642 104 ntBASIC2.13□□□□□ -2.07
NEDD4P46934 RNU6-562P-201ENST00000362731 107 ntBASIC2.13□□□□□ -2.07
NEDD4P46934 RNU6-1252P-201ENST00000363054 104 ntBASIC2.13□□□□□ -2.07
NEDD4P46934 Y_RNA.135-201ENST00000363439 95 ntBASIC2.13□□□□□ -2.07
NEDD4P46934 RNU6-1285P-201ENST00000363480 105 ntBASIC2.13□□□□□ -2.07
NEDD4P46934 RNA5SP240-201ENST00000365355 128 ntBASIC2.13□□□□□ -2.07
NEDD4P46934 RNU6-692P-201ENST00000384496 107 ntBASIC2.13□□□□□ -2.07
NEDD4P46934 RNU2-63P-201ENST00000410792 194 ntBASIC2.13□□□□□ -2.07
NEDD4P46934 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.13□□□□□ -2.07
NEDD4P46934 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
NEDD4P46934 RPL30P16-201ENST00000419341 429 ntBASIC2.13□□□□□ -2.07
NEDD4P46934 AIMP1P2-201ENST00000425294 312 ntBASIC2.13□□□□□ -2.07
NEDD4P46934 IFNA11P-201ENST00000446352 526 ntBASIC2.13□□□□□ -2.07
NEDD4P46934 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.13□□□□□ -2.07
NEDD4P46934 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.13□□□□□ -2.07
NEDD4P46934 AL121594.1-201ENST00000475906 575 ntBASIC2.13□□□□□ -2.07
NEDD4P46934 AC140059.1-201ENST00000489238 361 ntBASIC2.13□□□□□ -2.07
NEDD4P46934 HMGB3P3-201ENST00000510526 400 ntBASIC2.13□□□□□ -2.07
NEDD4P46934 RNU6-612P-201ENST00000516909 102 ntBASIC2.13□□□□□ -2.07
NEDD4P46934 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.13□□□□□ -2.07
NEDD4P46934 TRAV32-201ENST00000553993 340 ntBASIC2.13□□□□□ -2.07
NEDD4P46934 AC015712.3-201ENST00000559380 164 ntBASIC2.13□□□□□ -2.07
NEDD4P46934 AC011712.1-201ENST00000588959 234 ntBASIC2.13□□□□□ -2.07
NEDD4P46934 AC023043.2-201ENST00000589678 1026 ntBASIC2.13□□□□□ -2.07
NEDD4P46934 RBM11P1-201ENST00000604951 799 ntBASIC2.13□□□□□ -2.07
NEDD4P46934 AL136221.1-201ENST00000621449 509 ntBASIC2.13□□□□□ -2.07
NEDD4P46934 uc_338.20-201ENST00000621563 178 ntBASIC2.13□□□□□ -2.07
NEDD4P46934 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NEDD4P46934 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.12□□□□□ -2.07
NEDD4P46934 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.12□□□□□ -2.07
NEDD4P46934 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
NEDD4P46934 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NEDD4P46934 RNU1-72P-201ENST00000362976 153 ntBASIC2.12□□□□□ -2.07
NEDD4P46934 SNORD32A-201ENST00000364805 84 ntBASIC2.12□□□□□ -2.07
NEDD4P46934 SNORD116-11-201ENST00000383882 92 ntBASIC2.12□□□□□ -2.07
NEDD4P46934 SNORA32.2-201ENST00000384049 122 ntBASIC2.12□□□□□ -2.07
NEDD4P46934 RNU6-43P-201ENST00000384302 107 ntBASIC2.12□□□□□ -2.07
NEDD4P46934 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
NEDD4P46934 AL356776.1-201ENST00000406574 447 ntBASIC2.12□□□□□ -2.07
NEDD4P46934 RN7SKP61-201ENST00000410642 295 ntBASIC2.12□□□□□ -2.07
NEDD4P46934 AL030996.1-201ENST00000411430 235 ntBASIC2.12□□□□□ -2.07
NEDD4P46934 AL358453.1-201ENST00000422522 250 ntBASIC2.12□□□□□ -2.07
NEDD4P46934 RBMX2P4-201ENST00000441256 376 ntBASIC2.12□□□□□ -2.07
NEDD4P46934 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.12□□□□□ -2.07
NEDD4P46934 AMD1P1-201ENST00000457220 922 ntBASIC2.12□□□□□ -2.07
NEDD4P46934 RPL23AP42-201ENST00000471152 471 ntBASIC2.12□□□□□ -2.07
NEDD4P46934 AF213884.2-201ENST00000510417 903 ntBASIC2.12□□□□□ -2.07
NEDD4P46934 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.12□□□□□ -2.07
NEDD4P46934 AC025465.4-201ENST00000513422 638 ntBASIC2.12□□□□□ -2.07
NEDD4P46934 AC046134.1-201ENST00000514454 666 ntBASIC2.12□□□□□ -2.07
NEDD4P46934 CPDP1-201ENST00000579660 283 ntBASIC2.12□□□□□ -2.07
NEDD4P46934 AC011494.1-201ENST00000596454 237 ntBASIC2.12□□□□□ -2.07
NEDD4P46934 MIR6840-201ENST00000611937 71 ntBASIC2.12□□□□□ -2.07
NEDD4P46934 AC008121.3-201ENST00000618726 433 ntBASIC2.12□□□□□ -2.07
NEDD4P46934 AC009248.2-201ENST00000619826 254 ntBASIC2.12□□□□□ -2.07
NEDD4P46934 AC084768.2-201ENST00000622736 221 ntBASIC2.12□□□□□ -2.07
NEDD4P46934 CASC19-280ENST00000642102 1351 ntBASIC2.11□□□□□ -2.07
NEDD4P46934 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
NEDD4P46934 KPNA2P1-201ENST00000458289 1591 ntBASIC2.11□□□□□ -2.07
NEDD4P46934 Y_RNA.40-201ENST00000362645 93 ntBASIC2.11□□□□□ -2.07
NEDD4P46934 RNU6-227P-201ENST00000362865 103 ntBASIC2.11□□□□□ -2.07
NEDD4P46934 RNU6-482P-201ENST00000391068 107 ntBASIC2.11□□□□□ -2.07
NEDD4P46934 BTF3L4P2-201ENST00000392798 346 ntBASIC2.11□□□□□ -2.07
NEDD4P46934 RNU6-1148P-201ENST00000410992 104 ntBASIC2.11□□□□□ -2.07
NEDD4P46934 HMGN2P19-201ENST00000425149 265 ntBASIC2.11□□□□□ -2.07
NEDD4P46934 MTCO3P46-201ENST00000425787 232 ntBASIC2.11□□□□□ -2.07
NEDD4P46934 RPL23AP95-201ENST00000426806 265 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms