Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 RNU6-1179P-201ENST00000384667 107 ntBASIC1.13□□□□□ -2.23
COL5A3P25940 MIR561-201ENST00000385216 97 ntBASIC1.13□□□□□ -2.23
COL5A3P25940 RNU2-3P-201ENST00000410144 191 ntBASIC1.13□□□□□ -2.23
COL5A3P25940 Y_RNA.623-201ENST00000411128 95 ntBASIC1.13□□□□□ -2.23
COL5A3P25940 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.13□□□□□ -2.23
COL5A3P25940 RPL26P27-201ENST00000414397 437 ntBASIC1.13□□□□□ -2.23
COL5A3P25940 AC092809.3-201ENST00000415453 231 ntBASIC1.13□□□□□ -2.23
COL5A3P25940 EDDM3CP-201ENST00000415977 425 ntBASIC1.13□□□□□ -2.23
COL5A3P25940 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.13□□□□□ -2.23
COL5A3P25940 CALM2P2-201ENST00000428512 440 ntBASIC1.13□□□□□ -2.23
COL5A3P25940 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
COL5A3P25940 MTCO3P5-201ENST00000433620 714 ntBASIC1.13□□□□□ -2.23
COL5A3P25940 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.13□□□□□ -2.23
COL5A3P25940 AL353689.1-201ENST00000438895 199 ntBASIC1.13□□□□□ -2.23
COL5A3P25940 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.13□□□□□ -2.23
COL5A3P25940 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.13□□□□□ -2.23
COL5A3P25940 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.13□□□□□ -2.23
COL5A3P25940 AC012308.1-201ENST00000451232 178 ntBASIC1.13□□□□□ -2.23
COL5A3P25940 BTF3P15-201ENST00000455606 336 ntBASIC1.13□□□□□ -2.23
COL5A3P25940 AC104136.1-201ENST00000512969 394 ntBASIC1.13□□□□□ -2.23
COL5A3P25940 SNORA31.6-201ENST00000516241 130 ntBASIC1.13□□□□□ -2.23
COL5A3P25940 RNU6-914P-201ENST00000516749 109 ntBASIC1.13□□□□□ -2.23
COL5A3P25940 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.13□□□□□ -2.23
COL5A3P25940 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.13□□□□□ -2.23
COL5A3P25940 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.13□□□□□ -2.23
COL5A3P25940 AC087683.1-201ENST00000591187 441 ntBASIC1.13□□□□□ -2.23
COL5A3P25940 AL138889.2-201ENST00000603883 242 ntBASIC1.13□□□□□ -2.23
COL5A3P25940 RNU6-91P-201ENST00000607774 107 ntBASIC1.13□□□□□ -2.23
COL5A3P25940 AC097065.2-201ENST00000608159 533 ntBASIC1.13□□□□□ -2.23
COL5A3P25940 AC012409.4-201ENST00000612923 249 ntBASIC1.13□□□□□ -2.23
COL5A3P25940 AL354950.2-201ENST00000617939 290 ntBASIC1.13□□□□□ -2.23
COL5A3P25940 AL109933.3-201ENST00000619095 188 ntBASIC1.13□□□□□ -2.23
COL5A3P25940 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
COL5A3P25940 MTND5P26-201ENST00000426018 1752 ntBASIC1.13□□□□□ -2.23
COL5A3P25940 Y_RNA.324-201ENST00000365165 102 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 SNORD115-7-201ENST00000365306 82 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 RNU6-35P-201ENST00000384530 107 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 MIR934-201ENST00000401241 83 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 RNU6-387P-201ENST00000411331 105 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.12□□□□□ -2.23
COL5A3P25940 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.12□□□□□ -2.23
COL5A3P25940 MTCO3P46-201ENST00000425787 232 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.12□□□□□ -2.23
COL5A3P25940 AC133104.1-201ENST00000429100 218 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 AL358934.1-201ENST00000432346 324 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 HMGN2P10-201ENST00000448085 265 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 AC079448.1-201ENST00000449377 373 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.12□□□□□ -2.23
COL5A3P25940 MTND3P16-201ENST00000452205 344 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 SCARNA18-201ENST00000459004 134 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 RNU6-261P-201ENST00000459506 102 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.12□□□□□ -2.23
COL5A3P25940 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.12□□□□□ -2.23
COL5A3P25940 AC098591.2-201ENST00000510152 315 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.12□□□□□ -2.23
COL5A3P25940 MTND3P5-201ENST00000512798 333 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 AC074344.1-201ENST00000512823 224 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 RN7SKP179-201ENST00000516126 217 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 RNU6-123P-201ENST00000516163 102 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 SCARNA24.1-201ENST00000516465 137 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 SNORA31.19-201ENST00000517079 126 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 AC109329.1-201ENST00000518744 317 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 IMMP1LP2-201ENST00000552954 492 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 AL133241.1-201ENST00000556832 487 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 NDUFA8P1-201ENST00000605525 367 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 AL589743.7-201ENST00000612637 233 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 AC007742.2-201ENST00000618226 398 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 Y_RNA.1-201ENST00000352915 104 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 MIR412-201ENST00000362142 91 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 RNU6-858P-201ENST00000362436 107 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 RNU6-1322P-201ENST00000364309 107 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 Y_RNA.255-201ENST00000364581 97 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 RNU6-395P-201ENST00000365662 106 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 Y_RNA.481-201ENST00000384373 102 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 MIR518D-201ENST00000385014 87 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
COL5A3P25940 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.12□□□□□ -2.23
COL5A3P25940 BTF3L4P1-201ENST00000413813 468 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 OR6C66P-201ENST00000414917 930 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 MTCO2P19-201ENST00000427513 598 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 AL161788.1-201ENST00000441805 169 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 AC112771.1-201ENST00000463581 102 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 AC006512.1-201ENST00000468816 291 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.12□□□□□ -2.23
COL5A3P25940 RNA5SP112-201ENST00000515937 99 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 BNIP3P6-201ENST00000549284 499 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.12□□□□□ -2.23
COL5A3P25940 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.12□□□□□ -2.23
COL5A3P25940 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.12□□□□□ -2.23
COL5A3P25940 AL136363.2-201ENST00000604173 851 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 AP001596.2-201ENST00000608410 312 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 AC007684.1-201ENST00000609671 477 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 AC005609.4-201ENST00000625071 447 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 AC010487.4-201ENST00000637027 61 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 MIR924-201ENST00000638017 53 ntBASIC1.12□□□□□ -2.23
COL5A3P25940 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.11□□□□□ -2.23
COL5A3P25940 Y_RNA.409-201ENST00000383990 98 ntBASIC1.11□□□□□ -2.23
COL5A3P25940 Y_RNA.480-201ENST00000384364 102 ntBASIC1.11□□□□□ -2.23
COL5A3P25940 RNU6-817P-201ENST00000391083 104 ntBASIC1.11□□□□□ -2.23
COL5A3P25940 RNA5SP450-201ENST00000411206 102 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms