Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 MIR521-1-201ENST00000384902 87 ntBASIC3.12□□□□□ -1.91
POLR2AP24928 MIR1289-2-201ENST00000408360 111 ntBASIC3.12□□□□□ -1.91
POLR2AP24928 AL353705.4-201ENST00000449661 238 ntBASIC3.12□□□□□ -1.91
POLR2AP24928 RNU7-175P-201ENST00000515915 61 ntBASIC3.12□□□□□ -1.91
POLR2AP24928 AC109329.1-201ENST00000518744 317 ntBASIC3.12□□□□□ -1.91
POLR2AP24928 AC130289.1-201ENST00000577321 73 ntBASIC3.12□□□□□ -1.91
POLR2AP24928 AC073410.2-201ENST00000603240 332 ntBASIC3.12□□□□□ -1.91
POLR2AP24928 FTX_3.1-201ENST00000610451 147 ntBASIC3.12□□□□□ -1.91
POLR2AP24928 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.12□□□□□ -1.91
POLR2AP24928 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.12□□□□□ -1.91
POLR2AP24928 AC027309.3-201ENST00000623419 351 ntBASIC3.12□□□□□ -1.91
POLR2AP24928 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.12□□□□□ -1.91
POLR2AP24928 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
POLR2AP24928 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
POLR2AP24928 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
POLR2AP24928 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
POLR2AP24928 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.12□□□□□ -1.91
POLR2AP24928 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
POLR2AP24928 MIR411-201ENST00000362239 96 ntBASIC3.12□□□□□ -1.91
POLR2AP24928 RNU6-545P-201ENST00000362681 104 ntBASIC3.12□□□□□ -1.91
POLR2AP24928 Y_RNA.48-201ENST00000362710 103 ntBASIC3.12□□□□□ -1.91
POLR2AP24928 Y_RNA.237-201ENST00000364439 102 ntBASIC3.12□□□□□ -1.91
POLR2AP24928 Y_RNA.477-201ENST00000384352 108 ntBASIC3.12□□□□□ -1.91
POLR2AP24928 Y_RNA.504-201ENST00000384481 104 ntBASIC3.12□□□□□ -1.91
POLR2AP24928 MIR27B-201ENST00000385129 97 ntBASIC3.12□□□□□ -1.91
POLR2AP24928 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
POLR2AP24928 IFNA11P-201ENST00000446352 526 ntBASIC3.12□□□□□ -1.91
POLR2AP24928 HMGN2P13-201ENST00000476476 274 ntBASIC3.12□□□□□ -1.91
POLR2AP24928 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.12□□□□□ -1.91
POLR2AP24928 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.12□□□□□ -1.91
POLR2AP24928 RNU6-377P-201ENST00000515965 102 ntBASIC3.12□□□□□ -1.91
POLR2AP24928 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.12□□□□□ -1.91
POLR2AP24928 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.12□□□□□ -1.91
POLR2AP24928 AC130454.1-201ENST00000622948 401 ntBASIC3.12□□□□□ -1.91
POLR2AP24928 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
POLR2AP24928 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
POLR2AP24928 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
POLR2AP24928 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.11□□□□□ -1.91
POLR2AP24928 Y_RNA.105-201ENST00000363182 111 ntBASIC3.11□□□□□ -1.91
POLR2AP24928 RNU6-898P-201ENST00000365627 104 ntBASIC3.11□□□□□ -1.91
POLR2AP24928 RNU6-338P-201ENST00000383888 105 ntBASIC3.11□□□□□ -1.91
POLR2AP24928 RNU2-14P-201ENST00000411053 191 ntBASIC3.11□□□□□ -1.91
POLR2AP24928 AC009296.1-201ENST00000443146 155 ntBASIC3.11□□□□□ -1.91
POLR2AP24928 RPL23AP75-201ENST00000491601 451 ntBASIC3.11□□□□□ -1.91
POLR2AP24928 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.11□□□□□ -1.91
POLR2AP24928 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.11□□□□□ -1.91
POLR2AP24928 MRPS36P4-201ENST00000534436 298 ntBASIC3.11□□□□□ -1.91
POLR2AP24928 ZNF861P-201ENST00000588126 639 ntBASIC3.11□□□□□ -1.91
POLR2AP24928 AC097372.5-201ENST00000623665 376 ntBASIC3.11□□□□□ -1.91
POLR2AP24928 AL353746.1-201ENST00000566293 6881 ntBASIC3.11□□□□□ -1.91
POLR2AP24928 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.11□□□□□ -1.91
POLR2AP24928 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
POLR2AP24928 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
POLR2AP24928 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
POLR2AP24928 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
POLR2AP24928 MIR423-201ENST00000362201 94 ntBASIC3.11□□□□□ -1.91
POLR2AP24928 Y_RNA.170-201ENST00000363746 110 ntBASIC3.11□□□□□ -1.91
POLR2AP24928 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
POLR2AP24928 MIR301A-201ENST00000385261 86 ntBASIC3.11□□□□□ -1.91
POLR2AP24928 AL135786.1-201ENST00000415892 214 ntBASIC3.11□□□□□ -1.91
POLR2AP24928 Z98742.3-201ENST00000418637 326 ntBASIC3.11□□□□□ -1.91
POLR2AP24928 AL356320.1-201ENST00000429616 163 ntBASIC3.11□□□□□ -1.91
POLR2AP24928 UQCRHP3-201ENST00000451503 251 ntBASIC3.11□□□□□ -1.91
POLR2AP24928 PRELID3BP1-201ENST00000457142 540 ntBASIC3.11□□□□□ -1.91
POLR2AP24928 AC139453.3-201ENST00000493276 369 ntBASIC3.11□□□□□ -1.91
POLR2AP24928 SEPT14P8-201ENST00000508026 178 ntBASIC3.11□□□□□ -1.91
POLR2AP24928 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.11□□□□□ -1.91
POLR2AP24928 SNORA31.20-201ENST00000517111 133 ntBASIC3.11□□□□□ -1.91
POLR2AP24928 MIR4458-201ENST00000578872 75 ntBASIC3.11□□□□□ -1.91
POLR2AP24928 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.11□□□□□ -1.91
POLR2AP24928 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.1□□□□□ -1.91
POLR2AP24928 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
POLR2AP24928 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.1□□□□□ -1.91
POLR2AP24928 Y_RNA.16-201ENST00000362421 102 ntBASIC3.1□□□□□ -1.91
POLR2AP24928 Y_RNA.183-201ENST00000363882 113 ntBASIC3.1□□□□□ -1.91
POLR2AP24928 Y_RNA.200-201ENST00000364018 102 ntBASIC3.1□□□□□ -1.91
POLR2AP24928 Y_RNA.439-201ENST00000384119 94 ntBASIC3.1□□□□□ -1.91
POLR2AP24928 Y_RNA.562-201ENST00000384695 113 ntBASIC3.1□□□□□ -1.91
POLR2AP24928 RNU4-61P-201ENST00000411243 107 ntBASIC3.1□□□□□ -1.91
POLR2AP24928 SNRPEP9-201ENST00000436794 238 ntBASIC3.1□□□□□ -1.91
POLR2AP24928 AL603825.1-201ENST00000438481 80 ntBASIC3.1□□□□□ -1.91
POLR2AP24928 AC074133.1-201ENST00000515696 183 ntBASIC3.1□□□□□ -1.91
POLR2AP24928 Y_RNA.700-201ENST00000516806 100 ntBASIC3.1□□□□□ -1.91
POLR2AP24928 SNORD19.2-201ENST00000516978 73 ntBASIC3.1□□□□□ -1.91
POLR2AP24928 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.1□□□□□ -1.91
POLR2AP24928 AC136932.1-201ENST00000574771 208 ntBASIC3.1□□□□□ -1.91
POLR2AP24928 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
POLR2AP24928 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
POLR2AP24928 MIR26A1-201ENST00000362205 77 ntBASIC3.09□□□□□ -1.91
POLR2AP24928 MIR148B-201ENST00000362252 99 ntBASIC3.09□□□□□ -1.91
POLR2AP24928 Y_RNA.8-201ENST00000362353 102 ntBASIC3.09□□□□□ -1.91
POLR2AP24928 RPL27AP8-201ENST00000424277 446 ntBASIC3.09□□□□□ -1.91
POLR2AP24928 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.09□□□□□ -1.91
POLR2AP24928 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.09□□□□□ -1.91
POLR2AP24928 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.09□□□□□ -1.91
POLR2AP24928 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.09□□□□□ -1.91
POLR2AP24928 MIR4300-201ENST00000581016 96 ntBASIC3.09□□□□□ -1.91
POLR2AP24928 MZT1P2-201ENST00000604387 248 ntBASIC3.09□□□□□ -1.91
POLR2AP24928 AP002826.1-201ENST00000608835 315 ntBASIC3.09□□□□□ -1.91
POLR2AP24928 AC090115.4-201ENST00000609970 188 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms