Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 RNU6-572P-201ENST00000516724 80 ntBASIC3.15□□□□□ -1.91
COL11A2P13942 DEFB108E-201ENST00000524692 240 ntBASIC3.15□□□□□ -1.91
COL11A2P13942 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.15□□□□□ -1.91
COL11A2P13942 MIR4643-201ENST00000577473 78 ntBASIC3.15□□□□□ -1.91
COL11A2P13942 AC002545.1-201ENST00000592511 181 ntBASIC3.15□□□□□ -1.91
COL11A2P13942 AC010620.2-201ENST00000600135 313 ntBASIC3.15□□□□□ -1.91
COL11A2P13942 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.15□□□□□ -1.91
COL11A2P13942 AL592437.2-201ENST00000421655 2434 ntBASIC3.15□□□□□ -1.91
COL11A2P13942 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
COL11A2P13942 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
COL11A2P13942 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
COL11A2P13942 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.15□□□□□ -1.91
COL11A2P13942 AC004925.1-201ENST00000624256 2706 ntBASIC3.14□□□□□ -1.91
COL11A2P13942 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
COL11A2P13942 Y_RNA.200-201ENST00000364018 102 ntBASIC3.14□□□□□ -1.91
COL11A2P13942 Y_RNA.270-201ENST00000364693 104 ntBASIC3.14□□□□□ -1.91
COL11A2P13942 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.14□□□□□ -1.91
COL11A2P13942 RNU6-187P-201ENST00000384139 106 ntBASIC3.14□□□□□ -1.91
COL11A2P13942 RNU6-541P-201ENST00000384709 110 ntBASIC3.14□□□□□ -1.91
COL11A2P13942 AL359511.1-201ENST00000402970 211 ntBASIC3.14□□□□□ -1.91
COL11A2P13942 MIR1298-201ENST00000408783 112 ntBASIC3.14□□□□□ -1.91
COL11A2P13942 AC244098.2-201ENST00000422068 99 ntBASIC3.14□□□□□ -1.91
COL11A2P13942 AL138785.1-201ENST00000425821 331 ntBASIC3.14□□□□□ -1.91
COL11A2P13942 RPL23AP45-201ENST00000476406 468 ntBASIC3.14□□□□□ -1.91
COL11A2P13942 AL359273.1-201ENST00000510918 627 ntBASIC3.14□□□□□ -1.91
COL11A2P13942 RNU6-377P-201ENST00000515965 102 ntBASIC3.14□□□□□ -1.91
COL11A2P13942 RNA5SP290-201ENST00000517133 127 ntBASIC3.14□□□□□ -1.91
COL11A2P13942 RNA5SP380-201ENST00000517190 98 ntBASIC3.14□□□□□ -1.91
COL11A2P13942 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.14□□□□□ -1.91
COL11A2P13942 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
COL11A2P13942 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.14□□□□□ -1.91
COL11A2P13942 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.14□□□□□ -1.91
COL11A2P13942 AC136932.1-201ENST00000574771 208 ntBASIC3.14□□□□□ -1.91
COL11A2P13942 MIR3910-1-201ENST00000580936 111 ntBASIC3.14□□□□□ -1.91
COL11A2P13942 AC008121.1-201ENST00000603244 268 ntBASIC3.14□□□□□ -1.91
COL11A2P13942 RPL23AP88-201ENST00000605759 454 ntBASIC3.14□□□□□ -1.91
COL11A2P13942 AL161629.2-201ENST00000615347 275 ntBASIC3.14□□□□□ -1.91
COL11A2P13942 AL353748.2-201ENST00000622148 471 ntBASIC3.14□□□□□ -1.91
COL11A2P13942 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.14□□□□□ -1.91
COL11A2P13942 AC092881.1-201ENST00000638218 2733 ntBASIC3.14□□□□□ -1.91
COL11A2P13942 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.14□□□□□ -1.91
COL11A2P13942 AL157777.2-201ENST00000258070 137 ntBASIC3.13□□□□□ -1.91
COL11A2P13942 RNU5E-7P-201ENST00000365290 117 ntBASIC3.13□□□□□ -1.91
COL11A2P13942 RNU6-662P-201ENST00000384253 104 ntBASIC3.13□□□□□ -1.91
COL11A2P13942 MIR27B-201ENST00000385129 97 ntBASIC3.13□□□□□ -1.91
COL11A2P13942 AL451074.5-201ENST00000415894 435 ntBASIC3.13□□□□□ -1.91
COL11A2P13942 AC092047.1-201ENST00000424997 240 ntBASIC3.13□□□□□ -1.91
COL11A2P13942 AL356867.1-201ENST00000429623 299 ntBASIC3.13□□□□□ -1.91
COL11A2P13942 RPS23P5-201ENST00000495419 428 ntBASIC3.13□□□□□ -1.91
COL11A2P13942 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.13□□□□□ -1.91
COL11A2P13942 Y_RNA.706-201ENST00000516933 99 ntBASIC3.13□□□□□ -1.91
COL11A2P13942 AC104581.2-201ENST00000572227 430 ntBASIC3.13□□□□□ -1.91
COL11A2P13942 Y_RNA.772-201ENST00000606692 102 ntBASIC3.13□□□□□ -1.91
COL11A2P13942 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.13□□□□□ -1.91
COL11A2P13942 AL360181.4-201ENST00000621752 134 ntBASIC3.13□□□□□ -1.91
COL11A2P13942 AC127459.3-201ENST00000624328 466 ntBASIC3.13□□□□□ -1.91
COL11A2P13942 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.13□□□□□ -1.91
COL11A2P13942 AC007785.2-201ENST00000598627 1916 ntBASIC3.13□□□□□ -1.91
COL11A2P13942 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL11A2P13942 Y_RNA.83-201ENST00000363005 113 ntBASIC3.13□□□□□ -1.91
COL11A2P13942 SNORD81.1-201ENST00000363064 77 ntBASIC3.13□□□□□ -1.91
COL11A2P13942 SNORD14B-201ENST00000364533 90 ntBASIC3.13□□□□□ -1.91
COL11A2P13942 Y_RNA.297-201ENST00000364950 91 ntBASIC3.13□□□□□ -1.91
COL11A2P13942 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
COL11A2P13942 MIR190B-201ENST00000401119 79 ntBASIC3.13□□□□□ -1.91
COL11A2P13942 AL135786.1-201ENST00000415892 214 ntBASIC3.13□□□□□ -1.91
COL11A2P13942 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.13□□□□□ -1.91
COL11A2P13942 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.13□□□□□ -1.91
COL11A2P13942 SERF1AP1-201ENST00000514575 187 ntBASIC3.13□□□□□ -1.91
COL11A2P13942 RNU6-1256P-201ENST00000516539 103 ntBASIC3.13□□□□□ -1.91
COL11A2P13942 SCARNA24.2-201ENST00000516968 130 ntBASIC3.13□□□□□ -1.91
COL11A2P13942 Z83818.1-201ENST00000603584 150 ntBASIC3.13□□□□□ -1.91
COL11A2P13942 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.13□□□□□ -1.91
COL11A2P13942 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
COL11A2P13942 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.13□□□□□ -1.91
COL11A2P13942 MIR7153-201ENST00000637758 57 ntBASIC3.13□□□□□ -1.91
COL11A2P13942 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.13□□□□□ -1.91
COL11A2P13942 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.12□□□□□ -1.91
COL11A2P13942 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.12□□□□□ -1.91
COL11A2P13942 RNU6-545P-201ENST00000362681 104 ntBASIC3.12□□□□□ -1.91
COL11A2P13942 RNU6-227P-201ENST00000362865 103 ntBASIC3.12□□□□□ -1.91
COL11A2P13942 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.12□□□□□ -1.91
COL11A2P13942 VDAC1P3-201ENST00000434069 851 ntBASIC3.12□□□□□ -1.91
COL11A2P13942 Y_RNA.644-201ENST00000459006 113 ntBASIC3.12□□□□□ -1.91
COL11A2P13942 AC010469.2-201ENST00000496412 480 ntBASIC3.12□□□□□ -1.91
COL11A2P13942 Y_RNA.674-201ENST00000516362 113 ntBASIC3.12□□□□□ -1.91
COL11A2P13942 MED28P6-201ENST00000558776 231 ntBASIC3.12□□□□□ -1.91
COL11A2P13942 DEFB122-202ENST00000569013 197 ntBASIC3.12□□□□□ -1.91
COL11A2P13942 AC090617.3-201ENST00000573670 475 ntBASIC3.12□□□□□ -1.91
COL11A2P13942 FAM60BP-201ENST00000578364 658 ntBASIC3.12□□□□□ -1.91
COL11A2P13942 AL161798.1-201ENST00000604630 131 ntBASIC3.12□□□□□ -1.91
COL11A2P13942 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.12□□□□□ -1.91
COL11A2P13942 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.12□□□□□ -1.91
COL11A2P13942 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL11A2P13942 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL11A2P13942 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL11A2P13942 Y_RNA.44-201ENST00000362676 108 ntBASIC3.11□□□□□ -1.91
COL11A2P13942 Y_RNA.581-201ENST00000391017 97 ntBASIC3.11□□□□□ -1.91
COL11A2P13942 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.11□□□□□ -1.91
COL11A2P13942 FABP5P15-201ENST00000453566 214 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms