Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 Y_RNA.3-201ENST00000362331 103 ntBASIC2.92□□□□□ -1.94
HMGB1P09429 RNU1-76P-201ENST00000362903 159 ntBASIC2.92□□□□□ -1.94
HMGB1P09429 RNU4-12P-201ENST00000365233 139 ntBASIC2.92□□□□□ -1.94
HMGB1P09429 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
HMGB1P09429 EIF4EP2-201ENST00000422816 654 ntBASIC2.92□□□□□ -1.94
HMGB1P09429 RNU6-720P-201ENST00000516363 108 ntBASIC2.92□□□□□ -1.94
HMGB1P09429 RNU2-44P-201ENST00000516795 194 ntBASIC2.92□□□□□ -1.94
HMGB1P09429 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.92□□□□□ -1.94
HMGB1P09429 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.92□□□□□ -1.94
HMGB1P09429 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.92□□□□□ -1.94
HMGB1P09429 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.92□□□□□ -1.94
HMGB1P09429 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.92□□□□□ -1.94
HMGB1P09429 RNU5B-2P-201ENST00000363036 113 ntBASIC2.91□□□□□ -1.94
HMGB1P09429 Y_RNA.132-201ENST00000363421 102 ntBASIC2.91□□□□□ -1.94
HMGB1P09429 Y_RNA.151-201ENST00000363566 112 ntBASIC2.91□□□□□ -1.94
HMGB1P09429 SNORA5B-201ENST00000363786 132 ntBASIC2.91□□□□□ -1.94
HMGB1P09429 SNORA25.6-201ENST00000364121 118 ntBASIC2.91□□□□□ -1.94
HMGB1P09429 Y_RNA.530-201ENST00000384587 101 ntBASIC2.91□□□□□ -1.94
HMGB1P09429 SNORA48.1-201ENST00000390879 135 ntBASIC2.91□□□□□ -1.94
HMGB1P09429 AL359511.1-201ENST00000402970 211 ntBASIC2.91□□□□□ -1.94
HMGB1P09429 SNRPEP10-201ENST00000420249 274 ntBASIC2.91□□□□□ -1.94
HMGB1P09429 C8orf59P1-201ENST00000429930 303 ntBASIC2.91□□□□□ -1.94
HMGB1P09429 AL353572.1-201ENST00000442490 417 ntBASIC2.91□□□□□ -1.94
HMGB1P09429 AC108938.1-201ENST00000451204 136 ntBASIC2.91□□□□□ -1.94
HMGB1P09429 RNU1-131P-201ENST00000458943 161 ntBASIC2.91□□□□□ -1.94
HMGB1P09429 AL049873.1-201ENST00000480540 376 ntBASIC2.91□□□□□ -1.94
HMGB1P09429 RPS27P27-201ENST00000498779 255 ntBASIC2.91□□□□□ -1.94
HMGB1P09429 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.91□□□□□ -1.94
HMGB1P09429 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
HMGB1P09429 RNU6-545P-201ENST00000362681 104 ntBASIC2.9□□□□□ -1.95
HMGB1P09429 RNA5SP68-201ENST00000363885 119 ntBASIC2.9□□□□□ -1.95
HMGB1P09429 U3.12-201ENST00000364498 214 ntBASIC2.9□□□□□ -1.95
HMGB1P09429 U8.8-201ENST00000365399 135 ntBASIC2.9□□□□□ -1.95
HMGB1P09429 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.9□□□□□ -1.95
HMGB1P09429 MIR549A-201ENST00000385268 96 ntBASIC2.9□□□□□ -1.95
HMGB1P09429 NDUFB4P4-201ENST00000404822 243 ntBASIC2.9□□□□□ -1.95
HMGB1P09429 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.9□□□□□ -1.95
HMGB1P09429 PCMTD1P1-201ENST00000455560 355 ntBASIC2.9□□□□□ -1.95
HMGB1P09429 AP002770.2-201ENST00000543613 532 ntBASIC2.9□□□□□ -1.95
HMGB1P09429 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.9□□□□□ -1.95
HMGB1P09429 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.9□□□□□ -1.95
HMGB1P09429 AC005786.1-201ENST00000588553 154 ntBASIC2.9□□□□□ -1.95
HMGB1P09429 AC016727.2-201ENST00000603988 621 ntBASIC2.9□□□□□ -1.95
HMGB1P09429 MIR6817-201ENST00000615588 66 ntBASIC2.9□□□□□ -1.95
HMGB1P09429 AC005562.2-201ENST00000618264 111 ntBASIC2.9□□□□□ -1.95
HMGB1P09429 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
HMGB1P09429 AC016717.2-201ENST00000609089 5141 ntBASIC2.9□□□□□ -1.95
HMGB1P09429 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
HMGB1P09429 MIR518C-201ENST00000384822 101 ntBASIC2.89□□□□□ -1.95
HMGB1P09429 MTCO1P21-201ENST00000416634 589 ntBASIC2.89□□□□□ -1.95
HMGB1P09429 AL590632.1-201ENST00000424289 371 ntBASIC2.89□□□□□ -1.95
HMGB1P09429 AL645568.3-201ENST00000433683 316 ntBASIC2.89□□□□□ -1.95
HMGB1P09429 MTCO3P18-201ENST00000440206 761 ntBASIC2.89□□□□□ -1.95
HMGB1P09429 KPNA2P1-201ENST00000458289 1591 ntBASIC2.89□□□□□ -1.95
HMGB1P09429 AP001486.1-201ENST00000463339 476 ntBASIC2.89□□□□□ -1.95
HMGB1P09429 TRBVA-201ENST00000498804 316 ntBASIC2.89□□□□□ -1.95
HMGB1P09429 AC091435.1-201ENST00000505442 584 ntBASIC2.89□□□□□ -1.95
HMGB1P09429 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.89□□□□□ -1.95
HMGB1P09429 MIR4713-201ENST00000582691 75 ntBASIC2.89□□□□□ -1.95
HMGB1P09429 MIR5006-201ENST00000583027 110 ntBASIC2.89□□□□□ -1.95
HMGB1P09429 AC023043.2-201ENST00000589678 1026 ntBASIC2.89□□□□□ -1.95
HMGB1P09429 AP000907.4-201ENST00000604143 237 ntBASIC2.89□□□□□ -1.95
HMGB1P09429 AL133215.3-201ENST00000609801 448 ntBASIC2.89□□□□□ -1.95
HMGB1P09429 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.89□□□□□ -1.95
HMGB1P09429 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.89□□□□□ -1.95
HMGB1P09429 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.88□□□□□ -1.95
HMGB1P09429 RNU6-877P-201ENST00000383868 107 ntBASIC2.88□□□□□ -1.95
HMGB1P09429 NCOR1P3-201ENST00000420479 303 ntBASIC2.88□□□□□ -1.95
HMGB1P09429 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.88□□□□□ -1.95
HMGB1P09429 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.88□□□□□ -1.95
HMGB1P09429 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.88□□□□□ -1.95
HMGB1P09429 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.88□□□□□ -1.95
HMGB1P09429 AC016925.1-201ENST00000458303 298 ntBASIC2.88□□□□□ -1.95
HMGB1P09429 AC097473.1-201ENST00000508142 408 ntBASIC2.88□□□□□ -1.95
HMGB1P09429 RNU6-256P-201ENST00000516747 97 ntBASIC2.88□□□□□ -1.95
HMGB1P09429 SUMO2P18-201ENST00000518873 252 ntBASIC2.88□□□□□ -1.95
HMGB1P09429 DEFB131C-201ENST00000528817 165 ntBASIC2.88□□□□□ -1.95
HMGB1P09429 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.88□□□□□ -1.95
HMGB1P09429 EIF1P4-201ENST00000572664 335 ntBASIC2.88□□□□□ -1.95
HMGB1P09429 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.88□□□□□ -1.95
HMGB1P09429 AC067747.1-201ENST00000608026 250 ntBASIC2.88□□□□□ -1.95
HMGB1P09429 AC083806.3-201ENST00000614016 455 ntBASIC2.88□□□□□ -1.95
HMGB1P09429 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.88□□□□□ -1.95
HMGB1P09429 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
HMGB1P09429 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
HMGB1P09429 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HMGB1P09429 MIR340-201ENST00000362125 95 ntBASIC2.87□□□□□ -1.95
HMGB1P09429 RNY4P14-201ENST00000363656 96 ntBASIC2.87□□□□□ -1.95
HMGB1P09429 RNA5SP489-201ENST00000410986 109 ntBASIC2.87□□□□□ -1.95
HMGB1P09429 RNU6-373P-201ENST00000411247 98 ntBASIC2.87□□□□□ -1.95
HMGB1P09429 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.87□□□□□ -1.95
HMGB1P09429 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.87□□□□□ -1.95
HMGB1P09429 AC004386.2-201ENST00000441858 148 ntBASIC2.87□□□□□ -1.95
HMGB1P09429 AC007395.1-201ENST00000451333 677 ntBASIC2.87□□□□□ -1.95
HMGB1P09429 AC087477.1-201ENST00000465747 340 ntBASIC2.87□□□□□ -1.95
HMGB1P09429 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.87□□□□□ -1.95
HMGB1P09429 AF186996.7-201ENST00000492781 209 ntBASIC2.87□□□□□ -1.95
HMGB1P09429 AC107222.1-201ENST00000510899 637 ntBASIC2.87□□□□□ -1.95
HMGB1P09429 RNU6-273P-201ENST00000516937 96 ntBASIC2.87□□□□□ -1.95
HMGB1P09429 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms