Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 RPL23AP75-201ENST00000491601 451 ntBASIC3.04□□□□□ -1.92
RHOP08100 ANXA2P1-201ENST00000505539 926 ntBASIC3.04□□□□□ -1.92
RHOP08100 AC091874.1-201ENST00000511402 339 ntBASIC3.04□□□□□ -1.92
RHOP08100 SNORA25.11-201ENST00000515935 105 ntBASIC3.04□□□□□ -1.92
RHOP08100 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.04□□□□□ -1.92
RHOP08100 AC104027.1-201ENST00000521887 300 ntBASIC3.04□□□□□ -1.92
RHOP08100 MRPS36P4-201ENST00000534436 298 ntBASIC3.04□□□□□ -1.92
RHOP08100 AL442163.3-201ENST00000554110 156 ntBASIC3.04□□□□□ -1.92
RHOP08100 AC090517.1-201ENST00000569307 266 ntBASIC3.04□□□□□ -1.92
RHOP08100 HMGN2P15-201ENST00000585707 270 ntBASIC3.04□□□□□ -1.92
RHOP08100 AC010928.2-201ENST00000588017 287 ntBASIC3.04□□□□□ -1.92
RHOP08100 SNORA43.4-201ENST00000629559 138 ntBASIC3.04□□□□□ -1.92
RHOP08100 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RHOP08100 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RHOP08100 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
RHOP08100 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.04□□□□□ -1.92
RHOP08100 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RHOP08100 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RHOP08100 Y_RNA.214-201ENST00000364201 112 ntBASIC3.03□□□□□ -1.92
RHOP08100 RNA5SP139-201ENST00000364340 117 ntBASIC3.03□□□□□ -1.92
RHOP08100 RNU6-1141P-201ENST00000364520 107 ntBASIC3.03□□□□□ -1.92
RHOP08100 U3.13-201ENST00000364804 214 ntBASIC3.03□□□□□ -1.92
RHOP08100 RPL21P75-201ENST00000396599 483 ntBASIC3.03□□□□□ -1.92
RHOP08100 RPL21P28-201ENST00000401418 483 ntBASIC3.03□□□□□ -1.92
RHOP08100 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.03□□□□□ -1.92
RHOP08100 AC245291.1-201ENST00000419501 328 ntBASIC3.03□□□□□ -1.92
RHOP08100 AL590556.1-201ENST00000423231 483 ntBASIC3.03□□□□□ -1.92
RHOP08100 Z82188.1-201ENST00000436709 154 ntBASIC3.03□□□□□ -1.92
RHOP08100 DYNLT3P2-201ENST00000442517 295 ntBASIC3.03□□□□□ -1.92
RHOP08100 snoU13.28-201ENST00000459235 104 ntBASIC3.03□□□□□ -1.92
RHOP08100 RNU7-23P-201ENST00000459465 62 ntBASIC3.03□□□□□ -1.92
RHOP08100 RPL21P39-201ENST00000463605 483 ntBASIC3.03□□□□□ -1.92
RHOP08100 AC087190.1-201ENST00000484462 480 ntBASIC3.03□□□□□ -1.92
RHOP08100 AC107032.1-201ENST00000485945 480 ntBASIC3.03□□□□□ -1.92
RHOP08100 AC132942.1-201ENST00000486753 483 ntBASIC3.03□□□□□ -1.92
RHOP08100 AC093591.1-201ENST00000491435 481 ntBASIC3.03□□□□□ -1.92
RHOP08100 AF186996.7-201ENST00000492781 209 ntBASIC3.03□□□□□ -1.92
RHOP08100 RPL21P16-201ENST00000495531 483 ntBASIC3.03□□□□□ -1.92
RHOP08100 RNU6-1143P-201ENST00000516125 104 ntBASIC3.03□□□□□ -1.92
RHOP08100 RNU6-581P-201ENST00000516214 105 ntBASIC3.03□□□□□ -1.92
RHOP08100 SNORD19.2-201ENST00000516978 73 ntBASIC3.03□□□□□ -1.92
RHOP08100 ACA59.2-201ENST00000517061 156 ntBASIC3.03□□□□□ -1.92
RHOP08100 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.03□□□□□ -1.92
RHOP08100 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.03□□□□□ -1.92
RHOP08100 MIR5571-201ENST00000577998 113 ntBASIC3.03□□□□□ -1.92
RHOP08100 RMST_6.1-201ENST00000611980 203 ntBASIC3.03□□□□□ -1.92
RHOP08100 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.03□□□□□ -1.93
RHOP08100 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.02□□□□□ -1.93
RHOP08100 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
RHOP08100 RNU5B-2P-201ENST00000363036 113 ntBASIC3.02□□□□□ -1.93
RHOP08100 RNU6-622P-201ENST00000384272 103 ntBASIC3.02□□□□□ -1.93
RHOP08100 RNU6-611P-201ENST00000384276 104 ntBASIC3.02□□□□□ -1.93
RHOP08100 RNU6-472P-201ENST00000384299 107 ntBASIC3.02□□□□□ -1.93
RHOP08100 RNY3P4-201ENST00000384428 101 ntBASIC3.02□□□□□ -1.93
RHOP08100 RNU6-713P-201ENST00000384761 107 ntBASIC3.02□□□□□ -1.93
RHOP08100 RNA5SP274-201ENST00000410484 108 ntBASIC3.02□□□□□ -1.93
RHOP08100 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.02□□□□□ -1.93
RHOP08100 ELOCP20-201ENST00000422460 345 ntBASIC3.02□□□□□ -1.93
RHOP08100 AC063976.3-201ENST00000426849 329 ntBASIC3.02□□□□□ -1.93
RHOP08100 AC108059.2-201ENST00000434626 151 ntBASIC3.02□□□□□ -1.93
RHOP08100 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.02□□□□□ -1.93
RHOP08100 RPEP5-201ENST00000441137 268 ntBASIC3.02□□□□□ -1.93
RHOP08100 AC009296.1-201ENST00000443146 155 ntBASIC3.02□□□□□ -1.93
RHOP08100 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.02□□□□□ -1.93
RHOP08100 AL353705.4-201ENST00000449661 238 ntBASIC3.02□□□□□ -1.93
RHOP08100 AL109933.2-201ENST00000452651 260 ntBASIC3.02□□□□□ -1.93
RHOP08100 RPL30P1-201ENST00000488676 339 ntBASIC3.02□□□□□ -1.93
RHOP08100 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.02□□□□□ -1.93
RHOP08100 RNA5SP380-201ENST00000517190 98 ntBASIC3.02□□□□□ -1.93
RHOP08100 AP002770.2-201ENST00000543613 532 ntBASIC3.02□□□□□ -1.93
RHOP08100 AC079600.2-201ENST00000550076 130 ntBASIC3.02□□□□□ -1.93
RHOP08100 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.02□□□□□ -1.93
RHOP08100 AC090617.3-201ENST00000573670 475 ntBASIC3.02□□□□□ -1.93
RHOP08100 AL355877.2-201ENST00000603670 358 ntBASIC3.02□□□□□ -1.93
RHOP08100 MIR3199-2-201ENST00000636243 86 ntBASIC3.02□□□□□ -1.93
RHOP08100 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.02□□□□□ -1.93
RHOP08100 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.02□□□□□ -1.93
RHOP08100 Z75746.1-201ENST00000440243 2080 ntBASIC3.01□□□□□ -1.93
RHOP08100 RNU6-858P-201ENST00000362436 107 ntBASIC3.01□□□□□ -1.93
RHOP08100 Y_RNA.188-201ENST00000363952 111 ntBASIC3.01□□□□□ -1.93
RHOP08100 Y_RNA.358-201ENST00000365491 99 ntBASIC3.01□□□□□ -1.93
RHOP08100 RNU6-142P-201ENST00000384019 107 ntBASIC3.01□□□□□ -1.93
RHOP08100 RNU6-198P-201ENST00000384258 104 ntBASIC3.01□□□□□ -1.93
RHOP08100 Y_RNA.471-201ENST00000384312 102 ntBASIC3.01□□□□□ -1.93
RHOP08100 Y_RNA.512-201ENST00000384518 102 ntBASIC3.01□□□□□ -1.93
RHOP08100 Y_RNA.518-201ENST00000384552 113 ntBASIC3.01□□□□□ -1.93
RHOP08100 RNU6-1222P-201ENST00000384615 107 ntBASIC3.01□□□□□ -1.93
RHOP08100 SNORA26.3-201ENST00000391119 136 ntBASIC3.01□□□□□ -1.93
RHOP08100 RNA5SP390-201ENST00000410191 113 ntBASIC3.01□□□□□ -1.93
RHOP08100 AC023141.4-201ENST00000412031 328 ntBASIC3.01□□□□□ -1.93
RHOP08100 SDAD1P3-201ENST00000427380 333 ntBASIC3.01□□□□□ -1.93
RHOP08100 CBX3P6-201ENST00000430257 527 ntBASIC3.01□□□□□ -1.93
RHOP08100 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.01□□□□□ -1.93
RHOP08100 AL161651.1-201ENST00000440882 223 ntBASIC3.01□□□□□ -1.93
RHOP08100 AC104564.1-201ENST00000493028 407 ntBASIC3.01□□□□□ -1.93
RHOP08100 AC025465.3-201ENST00000510570 311 ntBASIC3.01□□□□□ -1.93
RHOP08100 AC067942.3-201ENST00000512025 362 ntBASIC3.01□□□□□ -1.93
RHOP08100 RNU5F-8P-201ENST00000515941 111 ntBASIC3.01□□□□□ -1.93
RHOP08100 RNU6-794P-201ENST00000517261 64 ntBASIC3.01□□□□□ -1.93
RHOP08100 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms