Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 MTND4P1-201ENST00000457501 1466 ntBASIC1.87□□□□□ -2.11
SFTPBP07988 AC009487.4-201ENST00000624969 3585 ntBASIC1.87□□□□□ -2.11
SFTPBP07988 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.86□□□□□ -2.11
SFTPBP07988 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SFTPBP07988 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
SFTPBP07988 RNU6-227P-201ENST00000362865 103 ntBASIC1.86□□□□□ -2.11
SFTPBP07988 RNU4-40P-201ENST00000364351 143 ntBASIC1.86□□□□□ -2.11
SFTPBP07988 AL357139.1-201ENST00000407792 426 ntBASIC1.86□□□□□ -2.11
SFTPBP07988 Y_RNA.615-201ENST00000410769 117 ntBASIC1.86□□□□□ -2.11
SFTPBP07988 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SFTPBP07988 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.86□□□□□ -2.11
SFTPBP07988 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.86□□□□□ -2.11
SFTPBP07988 HMGN2P18-201ENST00000450680 270 ntBASIC1.86□□□□□ -2.11
SFTPBP07988 snoU13.23-201ENST00000458863 104 ntBASIC1.86□□□□□ -2.11
SFTPBP07988 RNU6-717P-201ENST00000459076 104 ntBASIC1.86□□□□□ -2.11
SFTPBP07988 RPS29P27-201ENST00000463711 170 ntBASIC1.86□□□□□ -2.11
SFTPBP07988 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.86□□□□□ -2.11
SFTPBP07988 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.86□□□□□ -2.11
SFTPBP07988 AC108210.2-201ENST00000503681 201 ntBASIC1.86□□□□□ -2.11
SFTPBP07988 RNU1-40P-201ENST00000516816 164 ntBASIC1.86□□□□□ -2.11
SFTPBP07988 RNU1-97P-201ENST00000516872 164 ntBASIC1.86□□□□□ -2.11
SFTPBP07988 AC012557.2-201ENST00000605919 418 ntBASIC1.86□□□□□ -2.11
SFTPBP07988 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.86□□□□□ -2.11
SFTPBP07988 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SFTPBP07988 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
SFTPBP07988 AL359851.1-201ENST00000569460 4997 ntBASIC1.86□□□□□ -2.11
SFTPBP07988 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
SFTPBP07988 RNU1-58P-201ENST00000362413 163 ntBASIC1.85□□□□□ -2.11
SFTPBP07988 Y_RNA.99-201ENST00000363138 105 ntBASIC1.85□□□□□ -2.11
SFTPBP07988 U3.9-201ENST00000363823 204 ntBASIC1.85□□□□□ -2.11
SFTPBP07988 RNA5SP138-201ENST00000365098 114 ntBASIC1.85□□□□□ -2.11
SFTPBP07988 Y_RNA.373-201ENST00000365600 103 ntBASIC1.85□□□□□ -2.11
SFTPBP07988 MIR208B-201ENST00000401172 77 ntBASIC1.85□□□□□ -2.11
SFTPBP07988 RNU2-41P-201ENST00000410991 178 ntBASIC1.85□□□□□ -2.11
SFTPBP07988 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.85□□□□□ -2.11
SFTPBP07988 AL353689.1-201ENST00000438895 199 ntBASIC1.85□□□□□ -2.11
SFTPBP07988 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.85□□□□□ -2.11
SFTPBP07988 Y_RNA.638-201ENST00000459374 113 ntBASIC1.85□□□□□ -2.11
SFTPBP07988 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.85□□□□□ -2.11
SFTPBP07988 Y_RNA.665-201ENST00000516177 98 ntBASIC1.85□□□□□ -2.11
SFTPBP07988 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.85□□□□□ -2.11
SFTPBP07988 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.85□□□□□ -2.11
SFTPBP07988 CYP4A27P-201ENST00000567218 190 ntBASIC1.85□□□□□ -2.11
SFTPBP07988 CTHRC1P1-201ENST00000605383 469 ntBASIC1.85□□□□□ -2.11
SFTPBP07988 DISC2.1-201ENST00000612827 205 ntBASIC1.85□□□□□ -2.11
SFTPBP07988 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.85□□□□□ -2.11
SFTPBP07988 SDR42E1P4-201ENST00000620894 481 ntBASIC1.85□□□□□ -2.11
SFTPBP07988 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.85□□□□□ -2.11
SFTPBP07988 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.85□□□□□ -2.11
SFTPBP07988 RNU6-451P-201ENST00000362921 107 ntBASIC1.84□□□□□ -2.11
SFTPBP07988 RNU6-623P-201ENST00000363143 105 ntBASIC1.84□□□□□ -2.11
SFTPBP07988 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SFTPBP07988 RNU6-214P-201ENST00000384130 107 ntBASIC1.84□□□□□ -2.11
SFTPBP07988 RNA5SP465-201ENST00000391195 109 ntBASIC1.84□□□□□ -2.11
SFTPBP07988 MIR450B-201ENST00000401182 78 ntBASIC1.84□□□□□ -2.11
SFTPBP07988 RNU6-325P-201ENST00000411132 105 ntBASIC1.84□□□□□ -2.11
SFTPBP07988 AC012306.1-201ENST00000423267 114 ntBASIC1.84□□□□□ -2.11
SFTPBP07988 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.84□□□□□ -2.11
SFTPBP07988 C8orf59P1-201ENST00000429930 303 ntBASIC1.84□□□□□ -2.11
SFTPBP07988 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.84□□□□□ -2.11
SFTPBP07988 AC096638.1-201ENST00000444678 216 ntBASIC1.84□□□□□ -2.11
SFTPBP07988 snoU13.6-201ENST00000458785 104 ntBASIC1.84□□□□□ -2.11
SFTPBP07988 U8.21-201ENST00000459536 136 ntBASIC1.84□□□□□ -2.11
SFTPBP07988 AC132942.1-201ENST00000486753 483 ntBASIC1.84□□□□□ -2.11
SFTPBP07988 ATP5EP1-201ENST00000510257 156 ntBASIC1.84□□□□□ -2.11
SFTPBP07988 RNA5SP200-201ENST00000516360 103 ntBASIC1.84□□□□□ -2.11
SFTPBP07988 RNU6-567P-201ENST00000516746 107 ntBASIC1.84□□□□□ -2.11
SFTPBP07988 RNA5SP364-201ENST00000516938 78 ntBASIC1.84□□□□□ -2.11
SFTPBP07988 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.84□□□□□ -2.11
SFTPBP07988 EIF4A1P12-201ENST00000551910 141 ntBASIC1.84□□□□□ -2.11
SFTPBP07988 SCOCP1-201ENST00000554676 349 ntBASIC1.84□□□□□ -2.11
SFTPBP07988 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.84□□□□□ -2.11
SFTPBP07988 MIR4299-201ENST00000577899 72 ntBASIC1.84□□□□□ -2.11
SFTPBP07988 MIR5002-201ENST00000584713 97 ntBASIC1.84□□□□□ -2.11
SFTPBP07988 AC008749.1-201ENST00000597650 306 ntBASIC1.84□□□□□ -2.11
SFTPBP07988 AC243960.4-201ENST00000600532 288 ntBASIC1.84□□□□□ -2.11
SFTPBP07988 AL022345.1-201ENST00000607292 135 ntBASIC1.84□□□□□ -2.11
SFTPBP07988 MIR1321-201ENST00000637766 79 ntBASIC1.84□□□□□ -2.11
SFTPBP07988 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
SFTPBP07988 AC121333.1-201ENST00000567488 2709 ntBASIC1.84□□□□□ -2.12
SFTPBP07988 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SFTPBP07988 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.83□□□□□ -2.12
SFTPBP07988 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.83□□□□□ -2.12
SFTPBP07988 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
SFTPBP07988 RNU6-1252P-201ENST00000363054 104 ntBASIC1.83□□□□□ -2.12
SFTPBP07988 RNY3P3-201ENST00000363816 102 ntBASIC1.83□□□□□ -2.12
SFTPBP07988 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SFTPBP07988 MIR676-201ENST00000390702 67 ntBASIC1.83□□□□□ -2.12
SFTPBP07988 RNU4-26P-201ENST00000410270 107 ntBASIC1.83□□□□□ -2.12
SFTPBP07988 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.83□□□□□ -2.12
SFTPBP07988 MTCO1P20-201ENST00000425366 358 ntBASIC1.83□□□□□ -2.12
SFTPBP07988 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.83□□□□□ -2.12
SFTPBP07988 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.83□□□□□ -2.12
SFTPBP07988 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.83□□□□□ -2.12
SFTPBP07988 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.83□□□□□ -2.12
SFTPBP07988 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.83□□□□□ -2.12
SFTPBP07988 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.83□□□□□ -2.12
SFTPBP07988 AC016957.1-201ENST00000534895 309 ntBASIC1.83□□□□□ -2.12
SFTPBP07988 AC090517.1-201ENST00000569307 266 ntBASIC1.83□□□□□ -2.12
SFTPBP07988 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms