Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 SNORA19.3-201ENST00000516165 130 ntBASIC0.4□□□□□ -2.35
PDE6DO43924 RNU6-113P-201ENST00000516653 101 ntBASIC0.4□□□□□ -2.35
PDE6DO43924 RNA5SP337-201ENST00000517007 109 ntBASIC0.4□□□□□ -2.35
PDE6DO43924 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.4□□□□□ -2.35
PDE6DO43924 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.4□□□□□ -2.35
PDE6DO43924 APOOP3-201ENST00000536787 586 ntBASIC0.4□□□□□ -2.35
PDE6DO43924 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.4□□□□□ -2.35
PDE6DO43924 AC090517.1-201ENST00000569307 266 ntBASIC0.4□□□□□ -2.35
PDE6DO43924 TMF1P1-201ENST00000576058 373 ntBASIC0.4□□□□□ -2.35
PDE6DO43924 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.4□□□□□ -2.35
PDE6DO43924 AC008521.1-201ENST00000587471 187 ntBASIC0.4□□□□□ -2.35
PDE6DO43924 BNIP3P10-201ENST00000605360 577 ntBASIC0.4□□□□□ -2.35
PDE6DO43924 AP001596.2-201ENST00000608410 312 ntBASIC0.4□□□□□ -2.35
PDE6DO43924 GHRLOS.1-201ENST00000610995 70 ntBASIC0.4□□□□□ -2.35
PDE6DO43924 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
PDE6DO43924 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.39□□□□□ -2.35
PDE6DO43924 RNU6-545P-201ENST00000362681 104 ntBASIC0.39□□□□□ -2.35
PDE6DO43924 snoU2-30.2-201ENST00000362805 70 ntBASIC0.39□□□□□ -2.35
PDE6DO43924 SNORD32A-201ENST00000364805 84 ntBASIC0.39□□□□□ -2.35
PDE6DO43924 RNU6-505P-201ENST00000384427 107 ntBASIC0.39□□□□□ -2.35
PDE6DO43924 RNA5SP109-201ENST00000391010 116 ntBASIC0.39□□□□□ -2.35
PDE6DO43924 RNA5SP213-201ENST00000391031 106 ntBASIC0.39□□□□□ -2.35
PDE6DO43924 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.39□□□□□ -2.35
PDE6DO43924 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.39□□□□□ -2.35
PDE6DO43924 AC000111.3-201ENST00000433478 193 ntBASIC0.39□□□□□ -2.35
PDE6DO43924 EEF1A1P39-201ENST00000440791 250 ntBASIC0.39□□□□□ -2.35
PDE6DO43924 Z73417.1-201ENST00000447373 778 ntBASIC0.39□□□□□ -2.35
PDE6DO43924 AC098869.1-201ENST00000481627 292 ntBASIC0.39□□□□□ -2.35
PDE6DO43924 RPS26P48-201ENST00000491713 339 ntBASIC0.39□□□□□ -2.35
PDE6DO43924 AC005840.1-201ENST00000498412 377 ntBASIC0.39□□□□□ -2.35
PDE6DO43924 AC112206.4-201ENST00000515142 405 ntBASIC0.39□□□□□ -2.35
PDE6DO43924 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.39□□□□□ -2.35
PDE6DO43924 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.39□□□□□ -2.35
PDE6DO43924 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.39□□□□□ -2.35
PDE6DO43924 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.39□□□□□ -2.35
PDE6DO43924 AC091489.2-201ENST00000566263 604 ntBASIC0.39□□□□□ -2.35
PDE6DO43924 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.39□□□□□ -2.35
PDE6DO43924 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.39□□□□□ -2.35
PDE6DO43924 MTND3P19-201ENST00000603825 345 ntBASIC0.39□□□□□ -2.35
PDE6DO43924 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.39□□□□□ -2.35
PDE6DO43924 AC068700.1-201ENST00000565862 3754 ntBASIC0.39□□□□□ -2.35
PDE6DO43924 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.38□□□□□ -2.35
PDE6DO43924 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
PDE6DO43924 RNU6-336P-201ENST00000364891 107 ntBASIC0.38□□□□□ -2.35
PDE6DO43924 MIR508-201ENST00000384857 115 ntBASIC0.38□□□□□ -2.35
PDE6DO43924 MTATP6P20-201ENST00000414147 562 ntBASIC0.38□□□□□ -2.35
PDE6DO43924 AL162395.1-201ENST00000457882 422 ntBASIC0.38□□□□□ -2.35
PDE6DO43924 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.38□□□□□ -2.35
PDE6DO43924 CYP4A27P-201ENST00000567218 190 ntBASIC0.38□□□□□ -2.35
PDE6DO43924 AL356157.2-201ENST00000605122 111 ntBASIC0.38□□□□□ -2.35
PDE6DO43924 AC009994.1-201ENST00000606889 253 ntBASIC0.38□□□□□ -2.35
PDE6DO43924 AC097478.2-201ENST00000610572 514 ntBASIC0.38□□□□□ -2.35
PDE6DO43924 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.38□□□□□ -2.35
PDE6DO43924 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
PDE6DO43924 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
PDE6DO43924 SNORA18.2-201ENST00000383865 132 ntBASIC0.37□□□□□ -2.35
PDE6DO43924 RNU6-39P-201ENST00000384344 107 ntBASIC0.37□□□□□ -2.35
PDE6DO43924 RNU6-1257P-201ENST00000384625 110 ntBASIC0.37□□□□□ -2.35
PDE6DO43924 AC010154.1-201ENST00000425857 269 ntBASIC0.37□□□□□ -2.35
PDE6DO43924 AL133396.1-201ENST00000432048 687 ntBASIC0.37□□□□□ -2.35
PDE6DO43924 HSFY7P-201ENST00000432672 318 ntBASIC0.37□□□□□ -2.35
PDE6DO43924 AC002486.1-201ENST00000435098 391 ntBASIC0.37□□□□□ -2.35
PDE6DO43924 HMGN2P34-201ENST00000437647 269 ntBASIC0.37□□□□□ -2.35
PDE6DO43924 HSFY8P-201ENST00000437934 318 ntBASIC0.37□□□□□ -2.35
PDE6DO43924 SRRM1P2-201ENST00000464531 1192 ntBASIC0.37□□□□□ -2.35
PDE6DO43924 AC024995.1-201ENST00000523014 93 ntBASIC0.37□□□□□ -2.35
PDE6DO43924 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.37□□□□□ -2.35
PDE6DO43924 AC004812.1-201ENST00000540773 146 ntBASIC0.37□□□□□ -2.35
PDE6DO43924 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.37□□□□□ -2.35
PDE6DO43924 Z98751.3-201ENST00000604447 521 ntBASIC0.37□□□□□ -2.35
PDE6DO43924 AC080013.3-201ENST00000606839 578 ntBASIC0.37□□□□□ -2.35
PDE6DO43924 AL359740.1-201ENST00000624340 592 ntBASIC0.37□□□□□ -2.35
PDE6DO43924 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.37□□□□□ -2.35
PDE6DO43924 RNU6-37P-201ENST00000362692 107 ntBASIC0.36□□□□□ -2.35
PDE6DO43924 RNU6-552P-201ENST00000362869 119 ntBASIC0.36□□□□□ -2.35
PDE6DO43924 Y_RNA.111-201ENST00000363248 100 ntBASIC0.36□□□□□ -2.35
PDE6DO43924 RNU6-11P-201ENST00000364234 107 ntBASIC0.36□□□□□ -2.35
PDE6DO43924 RNU6-53P-201ENST00000365367 106 ntBASIC0.36□□□□□ -2.35
PDE6DO43924 RNU6-25P-201ENST00000383873 107 ntBASIC0.36□□□□□ -2.35
PDE6DO43924 RNU6-1-201ENST00000383898 107 ntBASIC0.36□□□□□ -2.35
PDE6DO43924 RNU6-48P-201ENST00000384161 107 ntBASIC0.36□□□□□ -2.35
PDE6DO43924 RNU6-36P-201ENST00000384172 107 ntBASIC0.36□□□□□ -2.35
PDE6DO43924 RNU6-4P-201ENST00000384205 107 ntBASIC0.36□□□□□ -2.35
PDE6DO43924 RNU6-5P-201ENST00000384238 107 ntBASIC0.36□□□□□ -2.35
PDE6DO43924 RNU6-3P-201ENST00000384314 107 ntBASIC0.36□□□□□ -2.35
PDE6DO43924 RNU6-16P-201ENST00000384385 107 ntBASIC0.36□□□□□ -2.35
PDE6DO43924 RNU6-15P-201ENST00000384534 107 ntBASIC0.36□□□□□ -2.35
PDE6DO43924 RNU6-2-201ENST00000384627 107 ntBASIC0.36□□□□□ -2.35
PDE6DO43924 RNU6-29P-201ENST00000384637 107 ntBASIC0.36□□□□□ -2.35
PDE6DO43924 RNU6-9-201ENST00000384776 107 ntBASIC0.36□□□□□ -2.35
PDE6DO43924 RNU6-33P-201ENST00000384793 107 ntBASIC0.36□□□□□ -2.35
PDE6DO43924 MIR300-201ENST00000401138 83 ntBASIC0.36□□□□□ -2.35
PDE6DO43924 MIR1261-201ENST00000408659 82 ntBASIC0.36□□□□□ -2.35
PDE6DO43924 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.36□□□□□ -2.35
PDE6DO43924 AL035398.1-201ENST00000430869 322 ntBASIC0.36□□□□□ -2.35
PDE6DO43924 RPL22P17-201ENST00000438729 315 ntBASIC0.36□□□□□ -2.35
PDE6DO43924 MTND3P1-201ENST00000441336 220 ntBASIC0.36□□□□□ -2.35
PDE6DO43924 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.36□□□□□ -2.35
PDE6DO43924 AC117522.1-201ENST00000509821 380 ntBASIC0.36□□□□□ -2.35
PDE6DO43924 SNORA31.10-201ENST00000516482 106 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms