Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 RNU1-148P-201ENST00000384472 162 ntBASIC2□□□□□ -2.09
NEDD8-MDP1E9PL57 RNU6-1274P-201ENST00000384557 107 ntBASIC2□□□□□ -2.09
NEDD8-MDP1E9PL57 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2□□□□□ -2.09
NEDD8-MDP1E9PL57 RNU2-63P-201ENST00000410792 194 ntBASIC2□□□□□ -2.09
NEDD8-MDP1E9PL57 AP000275.1-201ENST00000411943 390 ntBASIC2□□□□□ -2.09
NEDD8-MDP1E9PL57 UBE2V1P4-201ENST00000425374 344 ntBASIC2□□□□□ -2.09
NEDD8-MDP1E9PL57 AC078809.1-201ENST00000427601 140 ntBASIC2□□□□□ -2.09
NEDD8-MDP1E9PL57 AL133396.1-201ENST00000432048 687 ntBASIC2□□□□□ -2.09
NEDD8-MDP1E9PL57 RPS15AP10-201ENST00000432472 382 ntBASIC2□□□□□ -2.09
NEDD8-MDP1E9PL57 MTCO3P18-201ENST00000440206 761 ntBASIC2□□□□□ -2.09
NEDD8-MDP1E9PL57 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2□□□□□ -2.09
NEDD8-MDP1E9PL57 HMGN2P23-201ENST00000456759 269 ntBASIC2□□□□□ -2.09
NEDD8-MDP1E9PL57 AMD1P1-201ENST00000457220 922 ntBASIC2□□□□□ -2.09
NEDD8-MDP1E9PL57 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2□□□□□ -2.09
NEDD8-MDP1E9PL57 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2□□□□□ -2.09
NEDD8-MDP1E9PL57 RNU6-586P-201ENST00000517265 104 ntBASIC2□□□□□ -2.09
NEDD8-MDP1E9PL57 AC115990.1-201ENST00000526957 301 ntBASIC2□□□□□ -2.09
NEDD8-MDP1E9PL57 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2□□□□□ -2.09
NEDD8-MDP1E9PL57 CPDP1-201ENST00000579660 283 ntBASIC2□□□□□ -2.09
NEDD8-MDP1E9PL57 MIR3672-201ENST00000584290 82 ntBASIC2□□□□□ -2.09
NEDD8-MDP1E9PL57 MIR4448-201ENST00000584360 86 ntBASIC2□□□□□ -2.09
NEDD8-MDP1E9PL57 BNIP3P10-201ENST00000605360 577 ntBASIC2□□□□□ -2.09
NEDD8-MDP1E9PL57 AC018889.1-201ENST00000605372 397 ntBASIC2□□□□□ -2.09
NEDD8-MDP1E9PL57 U4atac.1-201ENST00000618345 95 ntBASIC2□□□□□ -2.09
NEDD8-MDP1E9PL57 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2□□□□□ -2.09
NEDD8-MDP1E9PL57 AL450472.1-202ENST00000637286 180 ntBASIC2□□□□□ -2.09
NEDD8-MDP1E9PL57 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 snoU2_19.1-201ENST00000362361 80 ntBASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 RNA5SP160-201ENST00000364866 120 ntBASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 Y_RNA.414-201ENST00000384011 101 ntBASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 RNU6-214P-201ENST00000384130 107 ntBASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 SNORA26.9-201ENST00000391322 122 ntBASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 RN7SKP61-201ENST00000410642 295 ntBASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 RNU2-48P-201ENST00000410694 191 ntBASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 ZNF885P-201ENST00000420174 1098 ntBASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 USP9YP28-201ENST00000435142 589 ntBASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 AC244670.1-201ENST00000436879 112 ntBASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 AC124916.1-201ENST00000444020 547 ntBASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 AL021397.1-201ENST00000451806 248 ntBASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 HMGB1P35-201ENST00000503360 598 ntBASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 AC022447.4-201ENST00000504053 364 ntBASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 RNU6-612P-201ENST00000516909 102 ntBASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 RNU6-1314P-201ENST00000517139 104 ntBASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 AC002984.1-201ENST00000591692 448 ntBASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 AL138726.1-201ENST00000614873 333 ntBASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 AC006504.8-201ENST00000621046 635 ntBASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 SNORA43.4-201ENST00000629559 138 ntBASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
NEDD8-MDP1E9PL57 AP000560.1-201ENST00000624150 1937 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 RNU4-15P-201ENST00000362613 141 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 Y_RNA.157-201ENST00000363638 102 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 RNU6-944P-201ENST00000364023 107 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 RNU6-1317P-201ENST00000364582 104 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 RNU6-482P-201ENST00000391068 107 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 SNORA26.3-201ENST00000391119 136 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 RNU2-20P-201ENST00000410425 191 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 EIF1AXP1-201ENST00000419267 435 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 AC003989.2-201ENST00000440224 169 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 GPM6BP3-201ENST00000442797 145 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 AC007677.1-201ENST00000445757 515 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 NFU1P2-201ENST00000448700 469 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 MTND1P11-201ENST00000456661 876 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 RPL9P9-202ENST00000466501 579 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 SNRPGP7-201ENST00000469016 106 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 RPL23AP63-201ENST00000498752 471 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 AC025465.4-201ENST00000513422 638 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 RNA5SP182-201ENST00000516064 82 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 RNU6-256P-201ENST00000516747 97 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 SNORA31.16-201ENST00000516773 139 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 RN7SKP256-201ENST00000517201 314 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 CYCSP26-201ENST00000534107 320 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 HSPE1P4-201ENST00000550617 308 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 AC026371.1-201ENST00000551867 419 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 MIR3942-201ENST00000585264 109 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 AL078605.1-201ENST00000603529 500 ntBASIC1.98□□□□□ -2.09
NEDD8-MDP1E9PL57 AC008121.3-201ENST00000618726 433 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms