Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 snoU2_19.1-201ENST00000362361 80 ntBASIC-1□□□□□ -2.57
LINC01549A6NIU2 Y_RNA.185-201ENST00000363894 100 ntBASIC-1□□□□□ -2.57
LINC01549A6NIU2 MIR613-201ENST00000385248 95 ntBASIC-1□□□□□ -2.57
LINC01549A6NIU2 AL451046.2-201ENST00000403074 277 ntBASIC-1□□□□□ -2.57
LINC01549A6NIU2 RNU2-59P-201ENST00000410482 191 ntBASIC-1□□□□□ -2.57
LINC01549A6NIU2 AL121578.1-201ENST00000428051 892 ntBASIC-1□□□□□ -2.57
LINC01549A6NIU2 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC-1□□□□□ -2.57
LINC01549A6NIU2 MTND4P19-201ENST00000446659 478 ntBASIC-1□□□□□ -2.57
LINC01549A6NIU2 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC-1□□□□□ -2.57
LINC01549A6NIU2 MRPL42P4-201ENST00000453267 443 ntBASIC-1□□□□□ -2.57
LINC01549A6NIU2 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-1□□□□□ -2.57
LINC01549A6NIU2 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-1□□□□□ -2.57
LINC01549A6NIU2 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-1□□□□□ -2.57
LINC01549A6NIU2 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC-1□□□□□ -2.57
LINC01549A6NIU2 AC090049.2-201ENST00000550377 109 ntBASIC-1□□□□□ -2.57
LINC01549A6NIU2 MIR5697-201ENST00000578045 78 ntBASIC-1□□□□□ -2.57
LINC01549A6NIU2 AL161798.1-201ENST00000604630 131 ntBASIC-1□□□□□ -2.57
LINC01549A6NIU2 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC-1□□□□□ -2.57
LINC01549A6NIU2 RNU6-94P-201ENST00000607728 107 ntBASIC-1□□□□□ -2.57
LINC01549A6NIU2 SEPT14P17-201ENST00000617978 177 ntBASIC-1□□□□□ -2.57
LINC01549A6NIU2 RNU4-76P-201ENST00000364509 141 ntBASIC-1.01□□□□□ -2.57
LINC01549A6NIU2 RNU6-487P-201ENST00000365430 104 ntBASIC-1.01□□□□□ -2.57
LINC01549A6NIU2 Y_RNA.362-201ENST00000365518 110 ntBASIC-1.01□□□□□ -2.57
LINC01549A6NIU2 FCF1P10-201ENST00000407590 479 ntBASIC-1.01□□□□□ -2.57
LINC01549A6NIU2 RNU6-994P-201ENST00000410507 111 ntBASIC-1.01□□□□□ -2.57
LINC01549A6NIU2 AC060773.1-201ENST00000421698 310 ntBASIC-1.01□□□□□ -2.57
LINC01549A6NIU2 AC005534.2-201ENST00000431047 433 ntBASIC-1.01□□□□□ -2.57
LINC01549A6NIU2 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC-1.01□□□□□ -2.57
LINC01549A6NIU2 AC026782.1-201ENST00000512952 449 ntBASIC-1.01□□□□□ -2.57
LINC01549A6NIU2 Y_RNA.696-201ENST00000516725 107 ntBASIC-1.01□□□□□ -2.57
LINC01549A6NIU2 AC022868.1-201ENST00000517767 391 ntBASIC-1.01□□□□□ -2.57
LINC01549A6NIU2 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-1.01□□□□□ -2.57
LINC01549A6NIU2 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-1.01□□□□□ -2.57
LINC01549A6NIU2 MIR4782-201ENST00000577987 79 ntBASIC-1.01□□□□□ -2.57
LINC01549A6NIU2 MIR3612-201ENST00000579753 87 ntBASIC-1.01□□□□□ -2.57
LINC01549A6NIU2 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC-1.01□□□□□ -2.57
LINC01549A6NIU2 AC240442.1-201ENST00000616055 283 ntBASIC-1.01□□□□□ -2.57
LINC01549A6NIU2 AL591926.4-201ENST00000616895 298 ntBASIC-1.01□□□□□ -2.57
LINC01549A6NIU2 Y_RNA.280-201ENST00000364765 112 ntBASIC-1.02□□□□□ -2.57
LINC01549A6NIU2 AC019178.2-201ENST00000423595 505 ntBASIC-1.02□□□□□ -2.57
LINC01549A6NIU2 ISCA1P1-201ENST00000426679 387 ntBASIC-1.02□□□□□ -2.57
LINC01549A6NIU2 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-1.02□□□□□ -2.57
LINC01549A6NIU2 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-1.02□□□□□ -2.57
LINC01549A6NIU2 AC091860.1-201ENST00000505723 432 ntBASIC-1.02□□□□□ -2.57
LINC01549A6NIU2 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-1.02□□□□□ -2.57
LINC01549A6NIU2 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC-1.02□□□□□ -2.57
LINC01549A6NIU2 SNORA76.2-201ENST00000517095 137 ntBASIC-1.02□□□□□ -2.57
LINC01549A6NIU2 AP002001.1-203ENST00000534002 267 ntBASIC-1.02□□□□□ -2.57
LINC01549A6NIU2 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-1.02□□□□□ -2.57
LINC01549A6NIU2 TPRKBP2-201ENST00000565969 475 ntBASIC-1.02□□□□□ -2.57
LINC01549A6NIU2 CTHRC1P1-201ENST00000605383 469 ntBASIC-1.02□□□□□ -2.57
LINC01549A6NIU2 RNU6-492P-201ENST00000363035 104 ntBASIC-1.03□□□□□ -2.57
LINC01549A6NIU2 RNA5SP457-201ENST00000363657 124 ntBASIC-1.03□□□□□ -2.57
LINC01549A6NIU2 SNORA8.2-201ENST00000384372 139 ntBASIC-1.03□□□□□ -2.57
LINC01549A6NIU2 RNU6-1031P-201ENST00000384773 107 ntBASIC-1.03□□□□□ -2.57
LINC01549A6NIU2 RNU6-1300P-201ENST00000391046 108 ntBASIC-1.03□□□□□ -2.57
LINC01549A6NIU2 AL603865.2-201ENST00000401679 213 ntBASIC-1.03□□□□□ -2.57
LINC01549A6NIU2 RNA5SP451-201ENST00000410588 110 ntBASIC-1.03□□□□□ -2.57
LINC01549A6NIU2 SNORD83.1-201ENST00000411362 77 ntBASIC-1.03□□□□□ -2.57
LINC01549A6NIU2 MTCO3P1-205ENST00000422088 832 ntBASIC-1.03□□□□□ -2.57
LINC01549A6NIU2 BTF3P15-201ENST00000455606 336 ntBASIC-1.03□□□□□ -2.57
LINC01549A6NIU2 MED28P2-201ENST00000475771 317 ntBASIC-1.03□□□□□ -2.57
LINC01549A6NIU2 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-1.03□□□□□ -2.57
LINC01549A6NIU2 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC-1.03□□□□□ -2.57
LINC01549A6NIU2 AL929325.1-201ENST00000603096 117 ntBASIC-1.03□□□□□ -2.57
LINC01549A6NIU2 AC096720.1-201ENST00000604441 183 ntBASIC-1.03□□□□□ -2.57
LINC01549A6NIU2 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-1.04□□□□□ -2.58
LINC01549A6NIU2 Y_RNA.115-201ENST00000363272 98 ntBASIC-1.04□□□□□ -2.58
LINC01549A6NIU2 RNU6-46P-201ENST00000383860 107 ntBASIC-1.04□□□□□ -2.58
LINC01549A6NIU2 RNU2-23P-201ENST00000410545 195 ntBASIC-1.04□□□□□ -2.58
LINC01549A6NIU2 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC-1.04□□□□□ -2.58
LINC01549A6NIU2 RPS29P8-201ENST00000445109 171 ntBASIC-1.04□□□□□ -2.58
LINC01549A6NIU2 MTND1P9-201ENST00000453775 944 ntBASIC-1.04□□□□□ -2.58
LINC01549A6NIU2 AC091021.1-201ENST00000468051 388 ntBASIC-1.04□□□□□ -2.58
LINC01549A6NIU2 RNA5SP94-201ENST00000516917 108 ntBASIC-1.04□□□□□ -2.58
LINC01549A6NIU2 AC025678.1-201ENST00000567861 338 ntBASIC-1.04□□□□□ -2.58
LINC01549A6NIU2 AC007363.1-201ENST00000604736 620 ntBASIC-1.04□□□□□ -2.58
LINC01549A6NIU2 AC079610.2-201ENST00000604818 690 ntBASIC-1.04□□□□□ -2.58
LINC01549A6NIU2 MIR3529-201ENST00000637713 78 ntBASIC-1.04□□□□□ -2.58
LINC01549A6NIU2 SNORA25.3-201ENST00000363205 127 ntBASIC-1.05□□□□□ -2.58
LINC01549A6NIU2 SNORA72.2-201ENST00000365028 127 ntBASIC-1.05□□□□□ -2.58
LINC01549A6NIU2 RNU6-167P-201ENST00000384292 106 ntBASIC-1.05□□□□□ -2.58
LINC01549A6NIU2 RNU6-843P-201ENST00000384454 104 ntBASIC-1.05□□□□□ -2.58
LINC01549A6NIU2 RNU6-925P-201ENST00000384629 104 ntBASIC-1.05□□□□□ -2.58
LINC01549A6NIU2 SNORA8.3-201ENST00000384679 139 ntBASIC-1.05□□□□□ -2.58
LINC01549A6NIU2 RNU4-46P-201ENST00000410818 138 ntBASIC-1.05□□□□□ -2.58
LINC01549A6NIU2 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-1.05□□□□□ -2.58
LINC01549A6NIU2 TPMTP2-201ENST00000414372 726 ntBASIC-1.05□□□□□ -2.58
LINC01549A6NIU2 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-1.05□□□□□ -2.58
LINC01549A6NIU2 RPL17P35-201ENST00000432217 549 ntBASIC-1.05□□□□□ -2.58
LINC01549A6NIU2 SNRPEP8-201ENST00000442866 260 ntBASIC-1.05□□□□□ -2.58
LINC01549A6NIU2 ZNF886P-201ENST00000450781 723 ntBASIC-1.05□□□□□ -2.58
LINC01549A6NIU2 AC091163.3-201ENST00000518269 1144 ntBASIC-1.05□□□□□ -2.58
LINC01549A6NIU2 AC093027.1-201ENST00000546698 429 ntBASIC-1.05□□□□□ -2.58
LINC01549A6NIU2 AC027288.2-201ENST00000553028 243 ntBASIC-1.05□□□□□ -2.58
LINC01549A6NIU2 MIR4300-201ENST00000581016 96 ntBASIC-1.05□□□□□ -2.58
LINC01549A6NIU2 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-1.05□□□□□ -2.58
LINC01549A6NIU2 AC002550.2-201ENST00000621246 394 ntBASIC-1.05□□□□□ -2.58
LINC01549A6NIU2 AL359697.1-201ENST00000624879 587 ntBASIC-1.05□□□□□ -2.58
LINC01549A6NIU2 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC-1.05□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 217.4 ms