Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 MTND3P12-201ENST00000559068 328 ntBASIC1.69□□□□□ -2.14
RNF103-CHMP3A0A140T963 RPL17P51-201ENST00000605218 238 ntBASIC1.69□□□□□ -2.14
RNF103-CHMP3A0A140T963 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.69□□□□□ -2.14
RNF103-CHMP3A0A140T963 AC005520.5-201ENST00000613926 164 ntBASIC1.69□□□□□ -2.14
RNF103-CHMP3A0A140T963 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
RNF103-CHMP3A0A140T963 RNU1-76P-201ENST00000362903 159 ntBASIC1.68□□□□□ -2.14
RNF103-CHMP3A0A140T963 SNORD48-201ENST00000364953 64 ntBASIC1.68□□□□□ -2.14
RNF103-CHMP3A0A140T963 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.68□□□□□ -2.14
RNF103-CHMP3A0A140T963 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.68□□□□□ -2.14
RNF103-CHMP3A0A140T963 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.68□□□□□ -2.14
RNF103-CHMP3A0A140T963 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.68□□□□□ -2.14
RNF103-CHMP3A0A140T963 AC016925.1-201ENST00000458303 298 ntBASIC1.68□□□□□ -2.14
RNF103-CHMP3A0A140T963 RPS23P5-201ENST00000495419 428 ntBASIC1.68□□□□□ -2.14
RNF103-CHMP3A0A140T963 AC107393.1-201ENST00000512403 346 ntBASIC1.68□□□□□ -2.14
RNF103-CHMP3A0A140T963 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.68□□□□□ -2.14
RNF103-CHMP3A0A140T963 SNORA14.1-201ENST00000516113 141 ntBASIC1.68□□□□□ -2.14
RNF103-CHMP3A0A140T963 RNU6-612P-201ENST00000516909 102 ntBASIC1.68□□□□□ -2.14
RNF103-CHMP3A0A140T963 AC110588.1-201ENST00000559699 137 ntBASIC1.68□□□□□ -2.14
RNF103-CHMP3A0A140T963 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.68□□□□□ -2.14
RNF103-CHMP3A0A140T963 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.68□□□□□ -2.14
RNF103-CHMP3A0A140T963 AC083806.3-201ENST00000614016 455 ntBASIC1.68□□□□□ -2.14
RNF103-CHMP3A0A140T963 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.68□□□□□ -2.14
RNF103-CHMP3A0A140T963 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.68□□□□□ -2.14
RNF103-CHMP3A0A140T963 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
RNF103-CHMP3A0A140T963 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
RNF103-CHMP3A0A140T963 AL159152.1-201ENST00000635019 2587 ntBASIC1.67□□□□□ -2.14
RNF103-CHMP3A0A140T963 ELL2P3-201ENST00000457883 1602 ntBASIC1.67□□□□□ -2.14
RNF103-CHMP3A0A140T963 Y_RNA.1-201ENST00000352915 104 ntBASIC1.67□□□□□ -2.14
RNF103-CHMP3A0A140T963 RNA5SP363-201ENST00000365072 115 ntBASIC1.67□□□□□ -2.14
RNF103-CHMP3A0A140T963 RNU6-1093P-201ENST00000391194 107 ntBASIC1.67□□□□□ -2.14
RNF103-CHMP3A0A140T963 AL079342.1-201ENST00000401460 267 ntBASIC1.67□□□□□ -2.14
RNF103-CHMP3A0A140T963 AL353193.1-201ENST00000421444 268 ntBASIC1.67□□□□□ -2.14
RNF103-CHMP3A0A140T963 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.67□□□□□ -2.14
RNF103-CHMP3A0A140T963 AL606489.2-201ENST00000433886 234 ntBASIC1.67□□□□□ -2.14
RNF103-CHMP3A0A140T963 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.67□□□□□ -2.14
RNF103-CHMP3A0A140T963 AC007395.1-201ENST00000451333 677 ntBASIC1.67□□□□□ -2.14
RNF103-CHMP3A0A140T963 RNU6-1037P-201ENST00000459571 107 ntBASIC1.67□□□□□ -2.14
RNF103-CHMP3A0A140T963 RPS29P21-201ENST00000496272 170 ntBASIC1.67□□□□□ -2.14
RNF103-CHMP3A0A140T963 RPS29P11-201ENST00000496507 171 ntBASIC1.67□□□□□ -2.14
RNF103-CHMP3A0A140T963 HMGB1P29-201ENST00000505659 499 ntBASIC1.67□□□□□ -2.14
RNF103-CHMP3A0A140T963 HMGN1P13-201ENST00000505795 138 ntBASIC1.67□□□□□ -2.14
RNF103-CHMP3A0A140T963 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.67□□□□□ -2.14
RNF103-CHMP3A0A140T963 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.67□□□□□ -2.14
RNF103-CHMP3A0A140T963 RNU6-189P-201ENST00000516120 101 ntBASIC1.67□□□□□ -2.14
RNF103-CHMP3A0A140T963 HMGB1P33-201ENST00000563485 527 ntBASIC1.67□□□□□ -2.14
RNF103-CHMP3A0A140T963 MIR4424-201ENST00000585257 86 ntBASIC1.67□□□□□ -2.14
RNF103-CHMP3A0A140T963 AC087683.1-201ENST00000591187 441 ntBASIC1.67□□□□□ -2.14
RNF103-CHMP3A0A140T963 AC119751.7-201ENST00000600494 245 ntBASIC1.67□□□□□ -2.14
RNF103-CHMP3A0A140T963 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.67□□□□□ -2.14
RNF103-CHMP3A0A140T963 RNU6-414P-201ENST00000363705 104 ntBASIC1.66□□□□□ -2.14
RNF103-CHMP3A0A140T963 MIR9-3-201ENST00000385084 90 ntBASIC1.66□□□□□ -2.14
RNF103-CHMP3A0A140T963 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.66□□□□□ -2.14
RNF103-CHMP3A0A140T963 USP9YP28-201ENST00000435142 589 ntBASIC1.66□□□□□ -2.14
RNF103-CHMP3A0A140T963 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.66□□□□□ -2.14
RNF103-CHMP3A0A140T963 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.66□□□□□ -2.14
RNF103-CHMP3A0A140T963 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.66□□□□□ -2.14
RNF103-CHMP3A0A140T963 TPTE2P5-203ENST00000458118 728 ntBASIC1.66□□□□□ -2.14
RNF103-CHMP3A0A140T963 snoU13.9-201ENST00000458927 103 ntBASIC1.66□□□□□ -2.14
RNF103-CHMP3A0A140T963 AC010531.2-201ENST00000465012 153 ntBASIC1.66□□□□□ -2.14
RNF103-CHMP3A0A140T963 RPL9P9-202ENST00000466501 579 ntBASIC1.66□□□□□ -2.14
RNF103-CHMP3A0A140T963 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.66□□□□□ -2.14
RNF103-CHMP3A0A140T963 AC098862.1-201ENST00000504991 413 ntBASIC1.66□□□□□ -2.14
RNF103-CHMP3A0A140T963 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.66□□□□□ -2.14
RNF103-CHMP3A0A140T963 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.66□□□□□ -2.14
RNF103-CHMP3A0A140T963 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.66□□□□□ -2.14
RNF103-CHMP3A0A140T963 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.66□□□□□ -2.14
RNF103-CHMP3A0A140T963 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.66□□□□□ -2.14
RNF103-CHMP3A0A140T963 RNU6-227P-201ENST00000362865 103 ntBASIC1.65□□□□□ -2.15
RNF103-CHMP3A0A140T963 RNU6-296P-201ENST00000384608 107 ntBASIC1.65□□□□□ -2.15
RNF103-CHMP3A0A140T963 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.65□□□□□ -2.15
RNF103-CHMP3A0A140T963 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.65□□□□□ -2.15
RNF103-CHMP3A0A140T963 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.65□□□□□ -2.15
RNF103-CHMP3A0A140T963 ATP5J2P3-201ENST00000451550 258 ntBASIC1.65□□□□□ -2.15
RNF103-CHMP3A0A140T963 snoU13.6-201ENST00000458785 104 ntBASIC1.65□□□□□ -2.15
RNF103-CHMP3A0A140T963 MTCO3P38-201ENST00000468910 766 ntBASIC1.65□□□□□ -2.15
RNF103-CHMP3A0A140T963 TRBV12-1-201ENST00000479785 344 ntBASIC1.65□□□□□ -2.15
RNF103-CHMP3A0A140T963 AC108078.1-201ENST00000508073 725 ntBASIC1.65□□□□□ -2.15
RNF103-CHMP3A0A140T963 AC096745.1-201ENST00000509945 370 ntBASIC1.65□□□□□ -2.15
RNF103-CHMP3A0A140T963 RNU6-970P-201ENST00000516312 107 ntBASIC1.65□□□□□ -2.15
RNF103-CHMP3A0A140T963 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.65□□□□□ -2.15
RNF103-CHMP3A0A140T963 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.65□□□□□ -2.15
RNF103-CHMP3A0A140T963 AC069114.2-201ENST00000604699 304 ntBASIC1.65□□□□□ -2.15
RNF103-CHMP3A0A140T963 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
RNF103-CHMP3A0A140T963 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.65□□□□□ -2.15
RNF103-CHMP3A0A140T963 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.65□□□□□ -2.15
RNF103-CHMP3A0A140T963 MIR3974-201ENST00000637126 96 ntBASIC1.65□□□□□ -2.15
RNF103-CHMP3A0A140T963 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.65□□□□□ -2.15
RNF103-CHMP3A0A140T963 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.65□□□□□ -2.15
RNF103-CHMP3A0A140T963 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
RNF103-CHMP3A0A140T963 MTND4P23-201ENST00000447723 1363 ntBASIC1.64□□□□□ -2.15
RNF103-CHMP3A0A140T963 Y_RNA.132-201ENST00000363421 102 ntBASIC1.64□□□□□ -2.15
RNF103-CHMP3A0A140T963 SNORA18.2-201ENST00000383865 132 ntBASIC1.64□□□□□ -2.15
RNF103-CHMP3A0A140T963 Y_RNA.553-201ENST00000384670 102 ntBASIC1.64□□□□□ -2.15
RNF103-CHMP3A0A140T963 MIR1267-201ENST00000408723 78 ntBASIC1.64□□□□□ -2.15
RNF103-CHMP3A0A140T963 RNU4-55P-201ENST00000410731 137 ntBASIC1.64□□□□□ -2.15
RNF103-CHMP3A0A140T963 RPS20P15-201ENST00000412792 311 ntBASIC1.64□□□□□ -2.15
RNF103-CHMP3A0A140T963 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.64□□□□□ -2.15
RNF103-CHMP3A0A140T963 AC090960.1-201ENST00000421072 306 ntBASIC1.64□□□□□ -2.15
RNF103-CHMP3A0A140T963 MTND1P26-201ENST00000440488 538 ntBASIC1.64□□□□□ -2.15
RNF103-CHMP3A0A140T963 MTCO1P44-201ENST00000441935 243 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms