Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 ACA59.1-201ENST00000515966 143 ntBASIC4.57□□□□□ -1.68
COL17A1Q9UMD9 AC024153.1-201ENST00000603103 365 ntBASIC4.57□□□□□ -1.68
COL17A1Q9UMD9 AC025754.2-201ENST00000606491 432 ntBASIC4.57□□□□□ -1.68
COL17A1Q9UMD9 AL591516.1-201ENST00000611326 274 ntBASIC4.57□□□□□ -1.68
COL17A1Q9UMD9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.57□□□□□ -1.68
COL17A1Q9UMD9 AL031601.2-202ENST00000622650 282 ntBASIC4.57□□□□□ -1.68
COL17A1Q9UMD9 AC097372.5-201ENST00000623665 376 ntBASIC4.57□□□□□ -1.68
COL17A1Q9UMD9 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL17A1Q9UMD9 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
COL17A1Q9UMD9 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL17A1Q9UMD9 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
COL17A1Q9UMD9 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
COL17A1Q9UMD9 RNU6-371P-201ENST00000364283 108 ntBASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 AL079342.1-201ENST00000401460 267 ntBASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 RPS4XP22-201ENST00000480755 780 ntBASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 AC113155.1-201ENST00000511141 769 ntBASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 RNU6-914P-201ENST00000516749 109 ntBASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 AC109329.2-201ENST00000519658 482 ntBASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 SNRPGP16-201ENST00000533275 226 ntBASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 AC011602.1-201ENST00000546484 331 ntBASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 MIR4458-201ENST00000578872 75 ntBASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 MIR3684-201ENST00000579779 74 ntBASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 Y_RNA.778-201ENST00000620203 90 ntBASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 AP003122.5-201ENST00000527668 3766 ntBASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 AC007496.3-201ENST00000624987 3443 ntBASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 RNU6-173P-201ENST00000364215 104 ntBASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 SNORD73B-201ENST00000364394 72 ntBASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 RNU6-755P-201ENST00000364400 103 ntBASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 SNORA20-201ENST00000384662 132 ntBASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 AC009963.1-201ENST00000417265 157 ntBASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 Y_RNA.709-201ENST00000516952 92 ntBASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 AC015712.3-201ENST00000559380 164 ntBASIC4.56□□□□□ -1.68
COL17A1Q9UMD9 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL17A1Q9UMD9 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
COL17A1Q9UMD9 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL17A1Q9UMD9 RNU4-90P-201ENST00000362773 141 ntBASIC4.55□□□□□ -1.68
COL17A1Q9UMD9 MIR301A-201ENST00000385261 86 ntBASIC4.55□□□□□ -1.68
COL17A1Q9UMD9 MIR1289-2-201ENST00000408360 111 ntBASIC4.55□□□□□ -1.68
COL17A1Q9UMD9 RNU6-1064P-201ENST00000410626 104 ntBASIC4.55□□□□□ -1.68
COL17A1Q9UMD9 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.55□□□□□ -1.68
COL17A1Q9UMD9 AL357134.1-201ENST00000445848 426 ntBASIC4.55□□□□□ -1.68
COL17A1Q9UMD9 IFNWP4-201ENST00000453148 294 ntBASIC4.55□□□□□ -1.68
COL17A1Q9UMD9 Y_RNA.694-201ENST00000516677 117 ntBASIC4.55□□□□□ -1.68
COL17A1Q9UMD9 AC023824.2-201ENST00000566185 400 ntBASIC4.55□□□□□ -1.68
COL17A1Q9UMD9 MIR5701-3-201ENST00000578890 82 ntBASIC4.55□□□□□ -1.68
COL17A1Q9UMD9 MIR548X2-201ENST00000579776 100 ntBASIC4.55□□□□□ -1.68
COL17A1Q9UMD9 MIR5701-1-201ENST00000585138 82 ntBASIC4.55□□□□□ -1.68
COL17A1Q9UMD9 AC008962.1-201ENST00000605729 304 ntBASIC4.55□□□□□ -1.68
COL17A1Q9UMD9 Y_RNA.772-201ENST00000606692 102 ntBASIC4.55□□□□□ -1.68
COL17A1Q9UMD9 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.55□□□□□ -1.68
COL17A1Q9UMD9 MIR5701-2-201ENST00000615634 82 ntBASIC4.55□□□□□ -1.68
COL17A1Q9UMD9 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL17A1Q9UMD9 AC009812.4-201ENST00000569134 1805 ntBASIC4.54□□□□□ -1.68
COL17A1Q9UMD9 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL17A1Q9UMD9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
COL17A1Q9UMD9 U8.2-201ENST00000363156 134 ntBASIC4.54□□□□□ -1.68
COL17A1Q9UMD9 Y_RNA.504-201ENST00000384481 104 ntBASIC4.54□□□□□ -1.68
COL17A1Q9UMD9 RNU6-700P-201ENST00000391043 107 ntBASIC4.54□□□□□ -1.68
COL17A1Q9UMD9 BX679664.1-201ENST00000434429 253 ntBASIC4.54□□□□□ -1.68
COL17A1Q9UMD9 HMGN2P13-201ENST00000476476 274 ntBASIC4.54□□□□□ -1.68
COL17A1Q9UMD9 AC107016.2-201ENST00000547968 190 ntBASIC4.54□□□□□ -1.68
COL17A1Q9UMD9 TGIF1P1-201ENST00000558095 802 ntBASIC4.54□□□□□ -1.68
COL17A1Q9UMD9 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL17A1Q9UMD9 uc_338.32-201ENST00000615087 172 ntBASIC4.54□□□□□ -1.68
COL17A1Q9UMD9 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC4.53□□□□□ -1.68
COL17A1Q9UMD9 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL17A1Q9UMD9 AL592437.2-201ENST00000421655 2434 ntBASIC4.53□□□□□ -1.68
COL17A1Q9UMD9 Y_RNA.275-201ENST00000364726 110 ntBASIC4.53□□□□□ -1.68
COL17A1Q9UMD9 Y_RNA.369-201ENST00000365568 117 ntBASIC4.53□□□□□ -1.68
COL17A1Q9UMD9 SNORD73A-201ENST00000386062 65 ntBASIC4.53□□□□□ -1.68
COL17A1Q9UMD9 AL030996.1-201ENST00000411430 235 ntBASIC4.53□□□□□ -1.68
COL17A1Q9UMD9 AL513331.1-201ENST00000411908 397 ntBASIC4.53□□□□□ -1.68
COL17A1Q9UMD9 AL591043.1-201ENST00000432461 424 ntBASIC4.53□□□□□ -1.68
COL17A1Q9UMD9 RNU6-927P-201ENST00000516199 100 ntBASIC4.53□□□□□ -1.68
COL17A1Q9UMD9 RNU1-143P-201ENST00000516296 146 ntBASIC4.53□□□□□ -1.68
COL17A1Q9UMD9 RNU6-638P-201ENST00000516582 104 ntBASIC4.53□□□□□ -1.68
COL17A1Q9UMD9 AL442163.3-201ENST00000554110 156 ntBASIC4.53□□□□□ -1.68
COL17A1Q9UMD9 MIR3976-201ENST00000606807 139 ntBASIC4.53□□□□□ -1.68
COL17A1Q9UMD9 U1.23-201ENST00000610293 146 ntBASIC4.53□□□□□ -1.68
COL17A1Q9UMD9 RNU1-68P-201ENST00000615382 146 ntBASIC4.53□□□□□ -1.68
COL17A1Q9UMD9 U1.39-201ENST00000621562 146 ntBASIC4.53□□□□□ -1.68
COL17A1Q9UMD9 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
COL17A1Q9UMD9 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms