Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 RN7SL271P-201ENST00000487601 295 ntBASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 RPL31P61-201ENST00000496160 376 ntBASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 Y_RNA.683-201ENST00000516508 93 ntBASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 MIR4282-201ENST00000583613 67 ntBASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 RPS15AP11-201ENST00000594193 385 ntBASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 AC091167.4-201ENST00000605079 184 ntBASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 AC022441.3-201ENST00000605737 136 ntBASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 AL590240.4-201ENST00000616908 390 ntBASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 MIR7975-201ENST00000619350 68 ntBASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDC42EP3Q9UKI2 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
CDC42EP3Q9UKI2 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 AF127577.6-201ENST00000623352 2191 ntBASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 Y_RNA.122-201ENST00000363331 96 ntBASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 RNU6-529P-201ENST00000363383 104 ntBASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 Y_RNA.199-201ENST00000364014 102 ntBASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 RNU6-740P-201ENST00000364734 105 ntBASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 RNY4P28-201ENST00000365281 93 ntBASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 RNVU1-14-201ENST00000384770 164 ntBASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 RNU6-750P-201ENST00000390946 107 ntBASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 U3.26-201ENST00000391236 204 ntBASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 PCNPP3-201ENST00000393579 471 ntBASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 EI24P2-201ENST00000397776 1076 ntBASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 MTND2P29-201ENST00000438595 412 ntBASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 AC083863.1-201ENST00000438811 231 ntBASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 Y_RNA.644-201ENST00000459006 113 ntBASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 AL133162.1-201ENST00000463228 453 ntBASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 AL049830.2-201ENST00000480072 201 ntBASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 AC106707.2-201ENST00000484182 374 ntBASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 Y_RNA.674-201ENST00000516362 113 ntBASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 SNORA25.14-201ENST00000516481 132 ntBASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 KLKP1-201ENST00000595979 403 ntBASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 AC008749.1-201ENST00000597650 306 ntBASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 AL162424.1-201ENST00000602325 221 ntBASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 AL773545.4-201ENST00000637262 310 ntBASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 AL513478.4-201ENST00000641636 310 ntBASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 MTND5P35-201ENST00000557537 1720 ntBASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 AC010889.1-201ENST00000566193 2666 ntBASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.21□□□□□ -1.9
CDC42EP3Q9UKI2 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 MIR410-201ENST00000362222 80 ntBASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 MIR411-201ENST00000362239 96 ntBASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 Y_RNA.40-201ENST00000362645 93 ntBASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 Y_RNA.275-201ENST00000364726 110 ntBASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 MIR1251-201ENST00000408552 70 ntBASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 RNU2-49P-201ENST00000410666 184 ntBASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 AIMP1P2-201ENST00000425294 312 ntBASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 RPS29P2-201ENST00000479278 136 ntBASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 AC104619.4-201ENST00000510773 249 ntBASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 RNU7-143P-201ENST00000516781 65 ntBASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 GNRHR2P1-201ENST00000555315 631 ntBASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 AC105137.2-201ENST00000569073 466 ntBASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 AC055872.1-201ENST00000570978 278 ntBASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 MIR5187-201ENST00000583479 76 ntBASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 AC012493.2-201ENST00000595083 291 ntBASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 AC005176.2-201ENST00000596933 147 ntBASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 AL391813.1-201ENST00000603098 260 ntBASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 MZT1P2-201ENST00000604387 248 ntBASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 AC011921.3-201ENST00000605540 361 ntBASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 AC037487.3-201ENST00000606668 112 ntBASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 AC068831.7-201ENST00000616954 363 ntBASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 ZNF204P-201ENST00000416749 2397 ntBASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CDC42EP3Q9UKI2 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 AL136164.4-201ENST00000625013 2135 ntBASIC3.19□□□□□ -1.9
CDC42EP3Q9UKI2 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms