Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 RNU6-325P-201ENST00000411132 105 ntBASIC2.16□□□□□ -2.06
HACD3Q9P035 AL030996.1-201ENST00000411430 235 ntBASIC2.16□□□□□ -2.06
HACD3Q9P035 AP000275.1-201ENST00000411943 390 ntBASIC2.16□□□□□ -2.06
HACD3Q9P035 AL590632.1-201ENST00000424289 371 ntBASIC2.16□□□□□ -2.06
HACD3Q9P035 RPL23AP95-201ENST00000426806 265 ntBASIC2.16□□□□□ -2.06
HACD3Q9P035 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.16□□□□□ -2.06
HACD3Q9P035 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.16□□□□□ -2.06
HACD3Q9P035 MTND1P11-201ENST00000456661 876 ntBASIC2.16□□□□□ -2.06
HACD3Q9P035 RNU7-187P-201ENST00000458985 68 ntBASIC2.16□□□□□ -2.06
HACD3Q9P035 RPS29P27-201ENST00000463711 170 ntBASIC2.16□□□□□ -2.06
HACD3Q9P035 RPL9P9-202ENST00000466501 579 ntBASIC2.16□□□□□ -2.06
HACD3Q9P035 RPL30P1-201ENST00000488676 339 ntBASIC2.16□□□□□ -2.06
HACD3Q9P035 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.16□□□□□ -2.06
HACD3Q9P035 AC008413.1-201ENST00000511864 177 ntBASIC2.16□□□□□ -2.06
HACD3Q9P035 RNU6-612P-201ENST00000516909 102 ntBASIC2.16□□□□□ -2.06
HACD3Q9P035 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.16□□□□□ -2.06
HACD3Q9P035 AC093249.1-201ENST00000567049 203 ntBASIC2.16□□□□□ -2.06
HACD3Q9P035 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.16□□□□□ -2.06
HACD3Q9P035 MIR4513-201ENST00000581077 86 ntBASIC2.16□□□□□ -2.06
HACD3Q9P035 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.16□□□□□ -2.06
HACD3Q9P035 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.16□□□□□ -2.06
HACD3Q9P035 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.16□□□□□ -2.06
HACD3Q9P035 AP000553.5-201ENST00000641933 54 ntBASIC2.16□□□□□ -2.06
HACD3Q9P035 RNU6-562P-201ENST00000362731 107 ntBASIC2.15□□□□□ -2.07
HACD3Q9P035 Y_RNA.72-201ENST00000362894 103 ntBASIC2.15□□□□□ -2.07
HACD3Q9P035 RNU6-1141P-201ENST00000364520 107 ntBASIC2.15□□□□□ -2.07
HACD3Q9P035 RNU1-148P-201ENST00000384472 162 ntBASIC2.15□□□□□ -2.07
HACD3Q9P035 SNORD23.1-201ENST00000408212 104 ntBASIC2.15□□□□□ -2.07
HACD3Q9P035 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.15□□□□□ -2.07
HACD3Q9P035 AL645568.3-201ENST00000433683 316 ntBASIC2.15□□□□□ -2.07
HACD3Q9P035 IFNA20P-201ENST00000436840 528 ntBASIC2.15□□□□□ -2.07
HACD3Q9P035 RNU6-329P-201ENST00000459618 107 ntBASIC2.15□□□□□ -2.07
HACD3Q9P035 AC096745.1-201ENST00000509945 370 ntBASIC2.15□□□□□ -2.07
HACD3Q9P035 AC091874.1-201ENST00000511402 339 ntBASIC2.15□□□□□ -2.07
HACD3Q9P035 AC025465.4-201ENST00000513422 638 ntBASIC2.15□□□□□ -2.07
HACD3Q9P035 RNU5F-2P-201ENST00000516066 82 ntBASIC2.15□□□□□ -2.07
HACD3Q9P035 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.15□□□□□ -2.07
HACD3Q9P035 CPDP1-201ENST00000579660 283 ntBASIC2.15□□□□□ -2.07
HACD3Q9P035 AL138963.2-201ENST00000605137 226 ntBASIC2.15□□□□□ -2.07
HACD3Q9P035 AC093913.1-201ENST00000614178 329 ntBASIC2.15□□□□□ -2.07
HACD3Q9P035 DUXAP9-208ENST00000622815 614 ntBASIC2.15□□□□□ -2.07
HACD3Q9P035 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.15□□□□□ -2.07
HACD3Q9P035 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
HACD3Q9P035 Y_RNA.160-201ENST00000363677 92 ntBASIC2.14□□□□□ -2.07
HACD3Q9P035 Y_RNA.390-201ENST00000383932 102 ntBASIC2.14□□□□□ -2.07
HACD3Q9P035 RNU6-1032P-201ENST00000384100 107 ntBASIC2.14□□□□□ -2.07
HACD3Q9P035 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
HACD3Q9P035 RN7SKP192-201ENST00000411291 327 ntBASIC2.14□□□□□ -2.07
HACD3Q9P035 AL356379.1-201ENST00000414105 126 ntBASIC2.14□□□□□ -2.07
HACD3Q9P035 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.14□□□□□ -2.07
HACD3Q9P035 MTCO3P46-201ENST00000425787 232 ntBASIC2.14□□□□□ -2.07
HACD3Q9P035 AC244670.1-201ENST00000436879 112 ntBASIC2.14□□□□□ -2.07
HACD3Q9P035 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.14□□□□□ -2.07
HACD3Q9P035 AL353752.1-201ENST00000454946 260 ntBASIC2.14□□□□□ -2.07
HACD3Q9P035 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.14□□□□□ -2.07
HACD3Q9P035 RPL31P58-201ENST00000469001 379 ntBASIC2.14□□□□□ -2.07
HACD3Q9P035 SNRPGP7-201ENST00000469016 106 ntBASIC2.14□□□□□ -2.07
HACD3Q9P035 MTCO1P29-201ENST00000496868 288 ntBASIC2.14□□□□□ -2.07
HACD3Q9P035 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.14□□□□□ -2.07
HACD3Q9P035 RNU6-273P-201ENST00000516937 96 ntBASIC2.14□□□□□ -2.07
HACD3Q9P035 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.14□□□□□ -2.07
HACD3Q9P035 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.14□□□□□ -2.07
HACD3Q9P035 AC115990.1-201ENST00000526957 301 ntBASIC2.14□□□□□ -2.07
HACD3Q9P035 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.14□□□□□ -2.07
HACD3Q9P035 AL356157.2-201ENST00000605122 111 ntBASIC2.14□□□□□ -2.07
HACD3Q9P035 MIR5739-201ENST00000619803 80 ntBASIC2.14□□□□□ -2.07
HACD3Q9P035 AL133216.2-202ENST00000634512 349 ntBASIC2.14□□□□□ -2.07
HACD3Q9P035 CENPCP1-201ENST00000533085 2578 ntBASIC2.14□□□□□ -2.07
HACD3Q9P035 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.14□□□□□ -2.07
HACD3Q9P035 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HACD3Q9P035 RNU6-227P-201ENST00000362865 103 ntBASIC2.13□□□□□ -2.07
HACD3Q9P035 Y_RNA.279-201ENST00000364763 95 ntBASIC2.13□□□□□ -2.07
HACD3Q9P035 MIR95-201ENST00000385072 81 ntBASIC2.13□□□□□ -2.07
HACD3Q9P035 RNU6-510P-201ENST00000391239 108 ntBASIC2.13□□□□□ -2.07
HACD3Q9P035 RNU6-876P-201ENST00000391295 104 ntBASIC2.13□□□□□ -2.07
HACD3Q9P035 RN7SKP61-201ENST00000410642 295 ntBASIC2.13□□□□□ -2.07
HACD3Q9P035 Z98742.3-201ENST00000418637 326 ntBASIC2.13□□□□□ -2.07
HACD3Q9P035 MTND3P9-201ENST00000429526 346 ntBASIC2.13□□□□□ -2.07
HACD3Q9P035 AL133396.1-201ENST00000432048 687 ntBASIC2.13□□□□□ -2.07
HACD3Q9P035 MTND4LP16-201ENST00000440828 295 ntBASIC2.13□□□□□ -2.07
HACD3Q9P035 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.13□□□□□ -2.07
HACD3Q9P035 RNU6-717P-201ENST00000459076 104 ntBASIC2.13□□□□□ -2.07
HACD3Q9P035 AC130509.1-201ENST00000464158 433 ntBASIC2.13□□□□□ -2.07
HACD3Q9P035 PRDX4P1-201ENST00000507189 574 ntBASIC2.13□□□□□ -2.07
HACD3Q9P035 PTP4A1P4-201ENST00000512479 322 ntBASIC2.13□□□□□ -2.07
HACD3Q9P035 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.13□□□□□ -2.07
HACD3Q9P035 RNU6-566P-201ENST00000516790 107 ntBASIC2.13□□□□□ -2.07
HACD3Q9P035 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.13□□□□□ -2.07
HACD3Q9P035 HSPE1P4-201ENST00000550617 308 ntBASIC2.13□□□□□ -2.07
HACD3Q9P035 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.13□□□□□ -2.07
HACD3Q9P035 IMMP1LP2-201ENST00000552954 492 ntBASIC2.13□□□□□ -2.07
HACD3Q9P035 MIR4742-201ENST00000581069 85 ntBASIC2.13□□□□□ -2.07
HACD3Q9P035 AC011712.1-201ENST00000588959 234 ntBASIC2.13□□□□□ -2.07
HACD3Q9P035 AC002984.1-201ENST00000591692 448 ntBASIC2.13□□□□□ -2.07
HACD3Q9P035 AL133215.3-201ENST00000609801 448 ntBASIC2.13□□□□□ -2.07
HACD3Q9P035 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.13□□□□□ -2.07
HACD3Q9P035 AC092881.1-201ENST00000638218 2733 ntBASIC2.12□□□□□ -2.07
HACD3Q9P035 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
HACD3Q9P035 Y_RNA.151-201ENST00000363566 112 ntBASIC2.12□□□□□ -2.07
HACD3Q9P035 RNU6-1013P-201ENST00000384180 107 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms