Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 SMURF2P1-201ENST00000514992 481 ntBASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 RNA5SP356-201ENST00000515972 94 ntBASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 SNORA31.15-201ENST00000516771 132 ntBASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 RNU6-699P-201ENST00000517081 110 ntBASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 SNRPGP18-201ENST00000553000 214 ntBASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 MIR4319-201ENST00000577285 85 ntBASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 BNIP3P16-201ENST00000589779 534 ntBASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 AC078795.3-201ENST00000602913 472 ntBASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 AC091152.3-201ENST00000604227 325 ntBASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 AP001836.1-201ENST00000604675 523 ntBASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 AC010889.1-201ENST00000566193 2666 ntBASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 MTND4P27-201ENST00000450813 1354 ntBASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.57□□□□□ -2
SMARCAL1Q9NZC9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 SNORD50.1-201ENST00000362987 71 ntBASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 RNU6-19P-201ENST00000384718 107 ntBASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 MIR196B-201ENST00000384852 84 ntBASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 MIR544A-201ENST00000384855 91 ntBASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 AL591034.2-201ENST00000402839 359 ntBASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 RNU6-1140P-201ENST00000410517 106 ntBASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 CR769767.1-201ENST00000436337 346 ntBASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 AC007969.2-201ENST00000441891 191 ntBASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 AP001486.1-201ENST00000463339 476 ntBASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 SNRPGP7-201ENST00000469016 106 ntBASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 AL163540.1-201ENST00000485382 386 ntBASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 AP001025.1-201ENST00000486139 332 ntBASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 AC091874.1-201ENST00000511402 339 ntBASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 Y_RNA.711-201ENST00000516993 102 ntBASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 AL442663.2-201ENST00000554385 511 ntBASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 AC005899.2-201ENST00000584353 90 ntBASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 VN1R107P-201ENST00000601784 209 ntBASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 AC005014.2-201ENST00000607795 599 ntBASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 Y_RNA.812-201ENST00000610788 101 ntBASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 Y_RNA.784-201ENST00000613803 101 ntBASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 Y_RNA.787-201ENST00000616522 101 ntBASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 Y_RNA.780-201ENST00000617336 101 ntBASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 Y_RNA.801-201ENST00000619005 101 ntBASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 RBBP8P1-201ENST00000449447 1844 ntBASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SMARCAL1Q9NZC9 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 RNA5SP393-201ENST00000363423 117 ntBASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 RNA5SP456-201ENST00000364002 114 ntBASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 SNORA22B-201ENST00000383876 138 ntBASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 RNU6-843P-201ENST00000384454 104 ntBASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 SNORA41-201ENST00000384675 132 ntBASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 RNU6-750P-201ENST00000390946 107 ntBASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 BTF3L4P2-201ENST00000392798 346 ntBASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 AL590004.1-201ENST00000405321 300 ntBASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 RNA5SP184-201ENST00000411071 108 ntBASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 AP000275.1-201ENST00000411943 390 ntBASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 MRPS18CP6-201ENST00000423587 223 ntBASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 PTGES3P4-201ENST00000426243 356 ntBASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 AC009296.1-201ENST00000443146 155 ntBASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 AC124916.1-201ENST00000444020 547 ntBASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 AC012308.1-201ENST00000451232 178 ntBASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 AC068781.1-201ENST00000488231 618 ntBASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 AC090096.1-201ENST00000489168 390 ntBASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 AC114801.2-201ENST00000503825 781 ntBASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 RNU5F-8P-201ENST00000515941 111 ntBASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 Y_RNA.661-201ENST00000516003 99 ntBASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 RNA5SP320-201ENST00000516263 124 ntBASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 AC025281.1-201ENST00000567026 265 ntBASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 AC090616.3-201ENST00000582184 217 ntBASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 RPL12P50-201ENST00000603116 116 ntBASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 AC040896.1-201ENST00000613819 479 ntBASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 UCA1.1-201ENST00000620952 75 ntBASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 FO624990.1-201ENST00000636373 85 ntBASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 AC009541.1-201ENST00000438279 2662 ntBASIC2.55□□□□□ -2
SMARCAL1Q9NZC9 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
SMARCAL1Q9NZC9 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.54□□□□□ -2
SMARCAL1Q9NZC9 AC062016.1-201ENST00000355719 319 ntBASIC2.54□□□□□ -2
SMARCAL1Q9NZC9 RNU6-99P-201ENST00000364721 107 ntBASIC2.54□□□□□ -2
SMARCAL1Q9NZC9 Y_RNA.496-201ENST00000384444 101 ntBASIC2.54□□□□□ -2
SMARCAL1Q9NZC9 RNU6-1245P-201ENST00000411130 106 ntBASIC2.54□□□□□ -2
SMARCAL1Q9NZC9 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.54□□□□□ -2
SMARCAL1Q9NZC9 NUP35P1-201ENST00000422734 947 ntBASIC2.54□□□□□ -2
SMARCAL1Q9NZC9 AC009414.1-201ENST00000427200 443 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms