Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 CYP4A27P-201ENST00000567218 190 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 AC243960.4-201ENST00000600532 288 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 AC005034.5-201ENST00000604219 466 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 Y_RNA.783-201ENST00000613546 102 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 AL773524.1-201ENST00000614065 229 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 AL590808.1-201ENST00000618696 141 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 AC068137.3-201ENST00000639191 341 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 AP000553.5-201ENST00000641933 54 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 AC121333.1-201ENST00000567488 2709 ntBASIC1.89□□□□□ -2.11
ZCCHC3Q9NUD5 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 RNU6-227P-201ENST00000362865 103 ntBASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 Y_RNA.111-201ENST00000363248 100 ntBASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 U3.9-201ENST00000363823 204 ntBASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 RNU6-522P-201ENST00000364497 107 ntBASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 RNU6-234P-201ENST00000365229 104 ntBASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 SNORA36A-201ENST00000384221 132 ntBASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 SNORA67.3-201ENST00000384366 140 ntBASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 AL359672.1-201ENST00000442302 409 ntBASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 AC007547.1-201ENST00000462177 490 ntBASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 RPS29P27-201ENST00000463711 170 ntBASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 SNORD60.2-201ENST00000516883 86 ntBASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 RNA5SP490-201ENST00000517141 136 ntBASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 AC104576.1-201ENST00000524225 88 ntBASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 MIR4299-201ENST00000577899 72 ntBASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 AL022345.1-201ENST00000607292 135 ntBASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 AC005520.5-201ENST00000613926 164 ntBASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 AC098657.3-201ENST00000620434 263 ntBASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 AC064859.1-201ENST00000624741 174 ntBASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 MIR219B-201ENST00000637023 88 ntBASIC1.88□□□□□ -2.11
ZCCHC3Q9NUD5 AC009541.1-201ENST00000438279 2662 ntBASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 Y_RNA.41-201ENST00000362646 102 ntBASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 RNU4-75P-201ENST00000364621 146 ntBASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 Y_RNA.332-201ENST00000365271 113 ntBASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 RNU6-483P-201ENST00000384088 108 ntBASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 RNU6-378P-201ENST00000384324 107 ntBASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 SNORA8-201ENST00000384574 139 ntBASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 MIR597-201ENST00000384968 97 ntBASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 SNORA3.2-201ENST00000408221 125 ntBASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 RN7SKP223-201ENST00000410582 62 ntBASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 DLGAP5P1-201ENST00000430307 464 ntBASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 AC104564.1-201ENST00000493028 407 ntBASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 AC008549.1-201ENST00000512900 643 ntBASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 AC025465.4-201ENST00000513422 638 ntBASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 RNU6-1281P-201ENST00000516223 105 ntBASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 Y_RNA.704-201ENST00000516851 102 ntBASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 AP005639.2-201ENST00000527592 928 ntBASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 AC087441.2-201ENST00000529141 262 ntBASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 EIF4A1P12-201ENST00000551910 141 ntBASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 AL157687.1-201ENST00000554853 619 ntBASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 AC027807.1-201ENST00000559921 996 ntBASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 BNIP3P25-201ENST00000596023 559 ntBASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 AL162413.1-201ENST00000603198 110 ntBASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 RNU6-89P-201ENST00000606519 100 ntBASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 FAM157A-202ENST00000615155 405 ntBASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 AL136221.1-201ENST00000621449 509 ntBASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 OR4G1P-203ENST00000641984 1631 ntBASIC1.87□□□□□ -2.11
ZCCHC3Q9NUD5 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
ZCCHC3Q9NUD5 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
ZCCHC3Q9NUD5 Y_RNA.372-201ENST00000365599 102 ntBASIC1.86□□□□□ -2.11
ZCCHC3Q9NUD5 Y_RNA.517-201ENST00000384551 106 ntBASIC1.86□□□□□ -2.11
ZCCHC3Q9NUD5 RNU6-160P-201ENST00000384591 107 ntBASIC1.86□□□□□ -2.11
ZCCHC3Q9NUD5 RNU6-908P-201ENST00000410160 94 ntBASIC1.86□□□□□ -2.11
ZCCHC3Q9NUD5 AC016907.1-201ENST00000419483 435 ntBASIC1.86□□□□□ -2.11
ZCCHC3Q9NUD5 DPH3P2-201ENST00000422618 250 ntBASIC1.86□□□□□ -2.11
ZCCHC3Q9NUD5 AL139415.2-201ENST00000431968 163 ntBASIC1.86□□□□□ -2.11
ZCCHC3Q9NUD5 ERLEC1P1-201ENST00000433806 578 ntBASIC1.86□□□□□ -2.11
ZCCHC3Q9NUD5 FTH1P25-201ENST00000447665 469 ntBASIC1.86□□□□□ -2.11
ZCCHC3Q9NUD5 RPL9P9-202ENST00000466501 579 ntBASIC1.86□□□□□ -2.11
ZCCHC3Q9NUD5 AC021146.2-201ENST00000504736 556 ntBASIC1.86□□□□□ -2.11
ZCCHC3Q9NUD5 AC005741.1-201ENST00000511094 432 ntBASIC1.86□□□□□ -2.11
ZCCHC3Q9NUD5 AC092436.3-201ENST00000511788 257 ntBASIC1.86□□□□□ -2.11
ZCCHC3Q9NUD5 AP005660.1-201ENST00000522972 293 ntBASIC1.86□□□□□ -2.11
ZCCHC3Q9NUD5 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.86□□□□□ -2.11
ZCCHC3Q9NUD5 AK6P1-201ENST00000540219 478 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms