Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 SNORD32A-201ENST00000364805 84 ntBASIC2.64□□□□□ -1.99
SMC4Q9NTJ3 EIF4E2P1-201ENST00000393781 255 ntBASIC2.64□□□□□ -1.99
SMC4Q9NTJ3 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.64□□□□□ -1.99
SMC4Q9NTJ3 HMGN2P38-201ENST00000423806 265 ntBASIC2.64□□□□□ -1.99
SMC4Q9NTJ3 AC078809.1-201ENST00000427601 140 ntBASIC2.64□□□□□ -1.99
SMC4Q9NTJ3 AL021397.1-201ENST00000451806 248 ntBASIC2.64□□□□□ -1.99
SMC4Q9NTJ3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.64□□□□□ -1.99
SMC4Q9NTJ3 SNORA19.2-201ENST00000516013 114 ntBASIC2.64□□□□□ -1.99
SMC4Q9NTJ3 AC034114.1-201ENST00000520293 285 ntBASIC2.64□□□□□ -1.99
SMC4Q9NTJ3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.64□□□□□ -1.99
SMC4Q9NTJ3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.64□□□□□ -1.99
SMC4Q9NTJ3 AC068944.2-201ENST00000610373 403 ntBASIC2.64□□□□□ -1.99
SMC4Q9NTJ3 Y_RNA.783-201ENST00000613546 102 ntBASIC2.64□□□□□ -1.99
SMC4Q9NTJ3 U6atac.1-201ENST00000616025 117 ntBASIC2.64□□□□□ -1.99
SMC4Q9NTJ3 AC090517.3-201ENST00000625170 141 ntBASIC2.64□□□□□ -1.99
SMC4Q9NTJ3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
SMC4Q9NTJ3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
SMC4Q9NTJ3 Y_RNA.573-201ENST00000384763 105 ntBASIC2.63□□□□□ -1.99
SMC4Q9NTJ3 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.63□□□□□ -1.99
SMC4Q9NTJ3 RNU4-26P-201ENST00000410270 107 ntBASIC2.63□□□□□ -1.99
SMC4Q9NTJ3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.63□□□□□ -1.99
SMC4Q9NTJ3 AC090255.1-201ENST00000495779 349 ntBASIC2.63□□□□□ -1.99
SMC4Q9NTJ3 HMGB1P35-201ENST00000503360 598 ntBASIC2.63□□□□□ -1.99
SMC4Q9NTJ3 FAM206BP-201ENST00000510179 541 ntBASIC2.63□□□□□ -1.99
SMC4Q9NTJ3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.63□□□□□ -1.99
SMC4Q9NTJ3 AC092436.3-201ENST00000511788 257 ntBASIC2.63□□□□□ -1.99
SMC4Q9NTJ3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.63□□□□□ -1.99
SMC4Q9NTJ3 RNA5SP137-201ENST00000516833 135 ntBASIC2.63□□□□□ -1.99
SMC4Q9NTJ3 HSPE1P18-201ENST00000517602 280 ntBASIC2.63□□□□□ -1.99
SMC4Q9NTJ3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.63□□□□□ -1.99
SMC4Q9NTJ3 IGKV3-31-201ENST00000523109 329 ntBASIC2.63□□□□□ -1.99
SMC4Q9NTJ3 AP000763.2-201ENST00000540641 163 ntBASIC2.63□□□□□ -1.99
SMC4Q9NTJ3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.63□□□□□ -1.99
SMC4Q9NTJ3 AP001836.1-201ENST00000604675 523 ntBASIC2.63□□□□□ -1.99
SMC4Q9NTJ3 ELOCP5-201ENST00000604924 333 ntBASIC2.63□□□□□ -1.99
SMC4Q9NTJ3 MIR219B-201ENST00000637023 88 ntBASIC2.63□□□□□ -1.99
SMC4Q9NTJ3 AC092881.1-201ENST00000638218 2733 ntBASIC2.63□□□□□ -1.99
SMC4Q9NTJ3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
SMC4Q9NTJ3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
SMC4Q9NTJ3 U3.13-201ENST00000364804 214 ntBASIC2.62□□□□□ -1.99
SMC4Q9NTJ3 SNORA26.3-201ENST00000391119 136 ntBASIC2.62□□□□□ -1.99
SMC4Q9NTJ3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SMC4Q9NTJ3 MIR450B-201ENST00000401182 78 ntBASIC2.62□□□□□ -1.99
SMC4Q9NTJ3 AP000275.1-201ENST00000411943 390 ntBASIC2.62□□□□□ -1.99
SMC4Q9NTJ3 EDDM3CP-201ENST00000415977 425 ntBASIC2.62□□□□□ -1.99
SMC4Q9NTJ3 AL513185.2-201ENST00000425543 193 ntBASIC2.62□□□□□ -1.99
SMC4Q9NTJ3 AC027124.2-201ENST00000428249 105 ntBASIC2.62□□□□□ -1.99
SMC4Q9NTJ3 AC244670.1-201ENST00000436879 112 ntBASIC2.62□□□□□ -1.99
SMC4Q9NTJ3 RNU6-717P-201ENST00000459076 104 ntBASIC2.62□□□□□ -1.99
SMC4Q9NTJ3 snoU13.26-201ENST00000459452 105 ntBASIC2.62□□□□□ -1.99
SMC4Q9NTJ3 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.62□□□□□ -1.99
SMC4Q9NTJ3 RNU6-1332P-201ENST00000516666 104 ntBASIC2.62□□□□□ -1.99
SMC4Q9NTJ3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.62□□□□□ -1.99
SMC4Q9NTJ3 AC104576.1-201ENST00000524225 88 ntBASIC2.62□□□□□ -1.99
SMC4Q9NTJ3 RPS3AP23-202ENST00000574601 686 ntBASIC2.62□□□□□ -1.99
SMC4Q9NTJ3 MIR3126-201ENST00000577443 74 ntBASIC2.62□□□□□ -1.99
SMC4Q9NTJ3 AL034555.1-201ENST00000604816 211 ntBASIC2.62□□□□□ -1.99
SMC4Q9NTJ3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SMC4Q9NTJ3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.62□□□□□ -1.99
SMC4Q9NTJ3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.62□□□□□ -1.99
SMC4Q9NTJ3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
SMC4Q9NTJ3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
SMC4Q9NTJ3 AC092268.1-201ENST00000342691 405 ntBASIC2.61□□□□□ -1.99
SMC4Q9NTJ3 RNU6-142P-201ENST00000384019 107 ntBASIC2.61□□□□□ -1.99
SMC4Q9NTJ3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.61□□□□□ -1.99
SMC4Q9NTJ3 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.61□□□□□ -1.99
SMC4Q9NTJ3 CBX3P6-201ENST00000430257 527 ntBASIC2.61□□□□□ -1.99
SMC4Q9NTJ3 AL133396.1-201ENST00000432048 687 ntBASIC2.61□□□□□ -1.99
SMC4Q9NTJ3 MTATP6P13-201ENST00000438531 667 ntBASIC2.61□□□□□ -1.99
SMC4Q9NTJ3 AL359672.1-201ENST00000442302 409 ntBASIC2.61□□□□□ -1.99
SMC4Q9NTJ3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.61□□□□□ -1.99
SMC4Q9NTJ3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.61□□□□□ -1.99
SMC4Q9NTJ3 RNU6-1037P-201ENST00000459571 107 ntBASIC2.61□□□□□ -1.99
SMC4Q9NTJ3 AC025033.1-201ENST00000463883 194 ntBASIC2.61□□□□□ -1.99
SMC4Q9NTJ3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.61□□□□□ -1.99
SMC4Q9NTJ3 AC022616.8-201ENST00000533569 253 ntBASIC2.61□□□□□ -1.99
SMC4Q9NTJ3 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.61□□□□□ -1.99
SMC4Q9NTJ3 MIR3942-201ENST00000585264 109 ntBASIC2.61□□□□□ -1.99
SMC4Q9NTJ3 AL161423.1-201ENST00000613700 262 ntBASIC2.61□□□□□ -1.99
SMC4Q9NTJ3 MIR7843-201ENST00000622274 79 ntBASIC2.61□□□□□ -1.99
SMC4Q9NTJ3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
SMC4Q9NTJ3 snoU2_19.1-201ENST00000362361 80 ntBASIC2.6□□□□□ -1.99
SMC4Q9NTJ3 Y_RNA.86-201ENST00000363020 111 ntBASIC2.6□□□□□ -1.99
SMC4Q9NTJ3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
SMC4Q9NTJ3 RNU6-546P-201ENST00000383991 107 ntBASIC2.6□□□□□ -1.99
SMC4Q9NTJ3 RNU4-52P-201ENST00000384209 138 ntBASIC2.6□□□□□ -1.99
SMC4Q9NTJ3 MIR504-201ENST00000385065 83 ntBASIC2.6□□□□□ -1.99
SMC4Q9NTJ3 RNU2-48P-201ENST00000410694 191 ntBASIC2.6□□□□□ -1.99
SMC4Q9NTJ3 RNA5SP270-201ENST00000411361 118 ntBASIC2.6□□□□□ -1.99
SMC4Q9NTJ3 HMGB3P2-201ENST00000411913 584 ntBASIC2.6□□□□□ -1.99
SMC4Q9NTJ3 AL590556.1-201ENST00000423231 483 ntBASIC2.6□□□□□ -1.99
SMC4Q9NTJ3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.6□□□□□ -1.99
SMC4Q9NTJ3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.6□□□□□ -1.99
SMC4Q9NTJ3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.6□□□□□ -1.99
SMC4Q9NTJ3 RNU6-237P-201ENST00000515985 71 ntBASIC2.6□□□□□ -1.99
SMC4Q9NTJ3 SNORA59B-202ENST00000578183 701 ntBASIC2.6□□□□□ -1.99
SMC4Q9NTJ3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.6□□□□□ -1.99
SMC4Q9NTJ3 SNORD98-201ENST00000636377 67 ntBASIC2.6□□□□□ -1.99
SMC4Q9NTJ3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.59□□□□□ -1.99
SMC4Q9NTJ3 RNU6-944P-201ENST00000364023 107 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms