Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 MIR6788-201ENST00000618842 66 ntBASIC0.29□□□□□ -2.36
LIMD2Q9BT23 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.29□□□□□ -2.36
LIMD2Q9BT23 SNORD98-201ENST00000636377 67 ntBASIC0.29□□□□□ -2.36
LIMD2Q9BT23 U4.7-201ENST00000638126 106 ntBASIC0.29□□□□□ -2.36
LIMD2Q9BT23 AC245060.5-201ENST00000610778 3293 ntBASIC0.29□□□□□ -2.36
LIMD2Q9BT23 MIR96-201ENST00000362288 78 ntBASIC0.28□□□□□ -2.36
LIMD2Q9BT23 Y_RNA.363-201ENST00000365529 113 ntBASIC0.28□□□□□ -2.36
LIMD2Q9BT23 RNU6-969P-201ENST00000383900 105 ntBASIC0.28□□□□□ -2.36
LIMD2Q9BT23 SNORA80D-201ENST00000384488 135 ntBASIC0.28□□□□□ -2.36
LIMD2Q9BT23 RNU6-1235P-201ENST00000384559 107 ntBASIC0.28□□□□□ -2.36
LIMD2Q9BT23 RNU6-1179P-201ENST00000384667 107 ntBASIC0.28□□□□□ -2.36
LIMD2Q9BT23 MIR578-201ENST00000384828 96 ntBASIC0.28□□□□□ -2.36
LIMD2Q9BT23 HIGD1AP15-201ENST00000416198 280 ntBASIC0.28□□□□□ -2.36
LIMD2Q9BT23 RPL23AP95-201ENST00000426806 265 ntBASIC0.28□□□□□ -2.36
LIMD2Q9BT23 AC244023.1-201ENST00000426884 112 ntBASIC0.28□□□□□ -2.36
LIMD2Q9BT23 RPS25P9-201ENST00000435591 252 ntBASIC0.28□□□□□ -2.36
LIMD2Q9BT23 NDUFA5P4-201ENST00000436704 385 ntBASIC0.28□□□□□ -2.36
LIMD2Q9BT23 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.28□□□□□ -2.36
LIMD2Q9BT23 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.28□□□□□ -2.36
LIMD2Q9BT23 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.28□□□□□ -2.36
LIMD2Q9BT23 RNU6-498P-201ENST00000459468 107 ntBASIC0.28□□□□□ -2.36
LIMD2Q9BT23 AL049829.1-201ENST00000465411 156 ntBASIC0.28□□□□□ -2.36
LIMD2Q9BT23 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.28□□□□□ -2.36
LIMD2Q9BT23 RPS26P48-201ENST00000491713 339 ntBASIC0.28□□□□□ -2.36
LIMD2Q9BT23 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.28□□□□□ -2.36
LIMD2Q9BT23 RNA5SP220-201ENST00000516298 104 ntBASIC0.28□□□□□ -2.36
LIMD2Q9BT23 AP003049.1-201ENST00000529418 457 ntBASIC0.28□□□□□ -2.36
LIMD2Q9BT23 APOOP3-201ENST00000536787 586 ntBASIC0.28□□□□□ -2.36
LIMD2Q9BT23 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.28□□□□□ -2.36
LIMD2Q9BT23 MIR4714-201ENST00000580728 77 ntBASIC0.28□□□□□ -2.36
LIMD2Q9BT23 MIR544B-201ENST00000582372 78 ntBASIC0.28□□□□□ -2.36
LIMD2Q9BT23 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.28□□□□□ -2.36
LIMD2Q9BT23 AC068620.3-201ENST00000602749 560 ntBASIC0.28□□□□□ -2.36
LIMD2Q9BT23 AC242498.1-201ENST00000604134 111 ntBASIC0.28□□□□□ -2.36
LIMD2Q9BT23 AC104073.3-201ENST00000610942 955 ntBASIC0.28□□□□□ -2.36
LIMD2Q9BT23 MIR8070-201ENST00000616510 88 ntBASIC0.28□□□□□ -2.36
LIMD2Q9BT23 AC126177.8-201ENST00000618339 1015 ntBASIC0.28□□□□□ -2.36
LIMD2Q9BT23 AC243994.1-201ENST00000618627 109 ntBASIC0.28□□□□□ -2.36
LIMD2Q9BT23 MIR338-201ENST00000636369 67 ntBASIC0.28□□□□□ -2.36
LIMD2Q9BT23 ELL2P3-201ENST00000457883 1602 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
LIMD2Q9BT23 RNA5SP432-201ENST00000362480 116 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 U3.9-201ENST00000363823 204 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 RNU6-1141P-201ENST00000364520 107 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 RNU6-950P-201ENST00000384651 107 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 SNORA26.3-201ENST00000391119 136 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 RPL22P18-201ENST00000417197 377 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 AC060773.1-201ENST00000421698 310 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 AC011233.1-201ENST00000422812 283 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 AC078809.1-201ENST00000427601 140 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.27□□□□□ -2.37
LIMD2Q9BT23 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.27□□□□□ -2.37
LIMD2Q9BT23 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.27□□□□□ -2.37
LIMD2Q9BT23 AL358794.1-201ENST00000445689 381 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.27□□□□□ -2.37
LIMD2Q9BT23 RNU7-14P-201ENST00000459331 62 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 Y_RNA.638-201ENST00000459374 113 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 RPS29P1-201ENST00000465274 159 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 AC011406.1-201ENST00000512440 370 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 RNU1-86P-201ENST00000516108 154 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 RNU6-1041P-201ENST00000516254 102 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 RNU2-34P-201ENST00000516534 121 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 RNU1-107P-201ENST00000516617 154 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 RNU6-1098P-201ENST00000516772 96 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 SUMO2P16-201ENST00000519475 264 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 MTND2P7-201ENST00000521337 640 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 AC109446.1-201ENST00000566172 220 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 MIR5000-201ENST00000577717 103 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 MIR3124-201ENST00000582636 67 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 AC012507.3-201ENST00000603556 477 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 PCGEM1.1-201ENST00000613431 131 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 MIR6734-201ENST00000621166 68 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 AC106858.1-201ENST00000637497 429 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 AC006927.4-201ENST00000639187 543 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 AL163152.1-201ENST00000642001 374 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 MTND4P14-201ENST00000435799 1354 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 AC023934.1-201ENST00000574529 2389 ntBASIC0.27□□□□□ -2.37
LIMD2Q9BT23 U3.8-201ENST00000363675 217 ntBASIC0.26□□□□□ -2.37
LIMD2Q9BT23 RNU5E-7P-201ENST00000365290 117 ntBASIC0.26□□□□□ -2.37
LIMD2Q9BT23 SNORD114-22-201ENST00000365423 72 ntBASIC0.26□□□□□ -2.37
LIMD2Q9BT23 MIR499A-201ENST00000384903 122 ntBASIC0.26□□□□□ -2.37
LIMD2Q9BT23 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.26□□□□□ -2.37
LIMD2Q9BT23 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.26□□□□□ -2.37
LIMD2Q9BT23 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.26□□□□□ -2.37
LIMD2Q9BT23 AC002486.1-201ENST00000435098 391 ntBASIC0.26□□□□□ -2.37
LIMD2Q9BT23 AC243964.1-201ENST00000441814 261 ntBASIC0.26□□□□□ -2.37
LIMD2Q9BT23 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.26□□□□□ -2.37
LIMD2Q9BT23 AL360271.2-201ENST00000447710 161 ntBASIC0.26□□□□□ -2.37
LIMD2Q9BT23 GAPDHP17-201ENST00000449858 1001 ntBASIC0.26□□□□□ -2.37
LIMD2Q9BT23 MTCYBP1-201ENST00000454315 1119 ntBASIC0.26□□□□□ -2.37
LIMD2Q9BT23 HMGN1P12-201ENST00000499125 195 ntBASIC0.26□□□□□ -2.37
LIMD2Q9BT23 AC113410.1-201ENST00000505029 247 ntBASIC0.26□□□□□ -2.37
LIMD2Q9BT23 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.26□□□□□ -2.37
LIMD2Q9BT23 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.26□□□□□ -2.37
LIMD2Q9BT23 AC087883.1-201ENST00000551882 391 ntBASIC0.26□□□□□ -2.37
LIMD2Q9BT23 MTND4LP25-201ENST00000570218 163 ntBASIC0.26□□□□□ -2.37
LIMD2Q9BT23 MIR3923-201ENST00000579521 83 ntBASIC0.26□□□□□ -2.37
LIMD2Q9BT23 MTATP6P3-201ENST00000581686 676 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms