Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 RNU4-49P-201ENST00000516080 140 ntBASIC2.7□□□□□ -1.98
HERPUD2Q9BSE4 AC107953.1-201ENST00000522216 297 ntBASIC2.7□□□□□ -1.98
HERPUD2Q9BSE4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.7□□□□□ -1.98
HERPUD2Q9BSE4 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.7□□□□□ -1.98
HERPUD2Q9BSE4 MIR3162-201ENST00000581818 82 ntBASIC2.7□□□□□ -1.98
HERPUD2Q9BSE4 FGF7P1-201ENST00000582820 288 ntBASIC2.7□□□□□ -1.98
HERPUD2Q9BSE4 C8orf59P2-201ENST00000603441 271 ntBASIC2.7□□□□□ -1.98
HERPUD2Q9BSE4 PCGEM1.1-201ENST00000613431 131 ntBASIC2.7□□□□□ -1.98
HERPUD2Q9BSE4 AL132822.1-201ENST00000617063 513 ntBASIC2.7□□□□□ -1.98
HERPUD2Q9BSE4 AC009248.2-201ENST00000619826 254 ntBASIC2.7□□□□□ -1.98
HERPUD2Q9BSE4 AC104985.2-201ENST00000620598 500 ntBASIC2.7□□□□□ -1.98
HERPUD2Q9BSE4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.7□□□□□ -1.98
HERPUD2Q9BSE4 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
HERPUD2Q9BSE4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 AC062016.1-201ENST00000355719 319 ntBASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 SNORD62.1-201ENST00000362541 86 ntBASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 RNU6-859P-201ENST00000362728 107 ntBASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 RNU6-26P-201ENST00000383985 107 ntBASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 MIR517A-201ENST00000385001 87 ntBASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 RNA5SP494-201ENST00000410653 129 ntBASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 RNU2-48P-201ENST00000410694 191 ntBASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 Z82205.1-201ENST00000428456 297 ntBASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 UBE2V1P7-201ENST00000446395 340 ntBASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 AC011753.1-201ENST00000451001 220 ntBASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 SNORD109B-201ENST00000458961 67 ntBASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 SNORD109A-201ENST00000459128 67 ntBASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 RPS27AP9-201ENST00000477681 438 ntBASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 AC018710.1-201ENST00000506509 158 ntBASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 AC010486.1-201ENST00000511793 424 ntBASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 ACA59.1-201ENST00000515966 143 ntBASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 RNA5SP137-201ENST00000516833 135 ntBASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 AP005639.2-201ENST00000527592 928 ntBASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 EIF4A1P12-201ENST00000551910 141 ntBASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 AC009127.3-201ENST00000570531 403 ntBASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 AC011712.1-201ENST00000588959 234 ntBASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 AC124303.1-201ENST00000605703 360 ntBASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 AC022202.1-201ENST00000613515 211 ntBASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
HERPUD2Q9BSE4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 Y_RNA.70-201ENST00000362886 110 ntBASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 SNORD32B-201ENST00000364460 84 ntBASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 U8.8-201ENST00000365399 135 ntBASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 RNU6-1286P-201ENST00000383871 107 ntBASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 SNORA29-201ENST00000384183 140 ntBASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 RNU6-378P-201ENST00000384324 107 ntBASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 AL139095.1-201ENST00000404326 391 ntBASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 RNA5SP201-201ENST00000410316 124 ntBASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 AL139396.1-201ENST00000421137 167 ntBASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 DAP3P1-201ENST00000441522 278 ntBASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 AC245102.2-201ENST00000448956 180 ntBASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 UBE2DNL-203ENST00000474922 222 ntBASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 PTP4A1P4-201ENST00000512479 322 ntBASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 RNU6-507P-201ENST00000516045 100 ntBASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 RNU7-193P-201ENST00000516723 65 ntBASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 RNU6-566P-201ENST00000516790 107 ntBASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 AC087241.2-201ENST00000535801 324 ntBASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 AC243972.3-201ENST00000539655 198 ntBASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 MIR4672-201ENST00000583126 81 ntBASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 DUXAP9-208ENST00000622815 614 ntBASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 AC233981.2-201ENST00000611524 1614 ntBASIC2.68□□□□□ -1.98
HERPUD2Q9BSE4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.67□□□□□ -1.98
HERPUD2Q9BSE4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HERPUD2Q9BSE4 RNU6-1159P-201ENST00000362933 107 ntBASIC2.67□□□□□ -1.98
HERPUD2Q9BSE4 RNU6-797P-201ENST00000363101 109 ntBASIC2.67□□□□□ -1.98
HERPUD2Q9BSE4 RNU1-138P-201ENST00000384093 164 ntBASIC2.67□□□□□ -1.98
HERPUD2Q9BSE4 RNU6-784P-201ENST00000384330 106 ntBASIC2.67□□□□□ -1.98
HERPUD2Q9BSE4 RNU6-1093P-201ENST00000391194 107 ntBASIC2.67□□□□□ -1.98
HERPUD2Q9BSE4 AL356776.1-201ENST00000406574 447 ntBASIC2.67□□□□□ -1.98
HERPUD2Q9BSE4 MTND4P28-201ENST00000426217 387 ntBASIC2.67□□□□□ -1.98
HERPUD2Q9BSE4 AL353705.4-201ENST00000449661 238 ntBASIC2.67□□□□□ -1.98
HERPUD2Q9BSE4 AP000705.1-201ENST00000454567 350 ntBASIC2.67□□□□□ -1.98
HERPUD2Q9BSE4 PRELID3BP1-201ENST00000457142 540 ntBASIC2.67□□□□□ -1.98
HERPUD2Q9BSE4 PPP1R2P5-201ENST00000457256 603 ntBASIC2.67□□□□□ -1.98
HERPUD2Q9BSE4 MIR449C-201ENST00000516047 92 ntBASIC2.67□□□□□ -1.98
HERPUD2Q9BSE4 RNU6-1088P-201ENST00000516850 104 ntBASIC2.67□□□□□ -1.98
HERPUD2Q9BSE4 RNA5SP454-201ENST00000517231 127 ntBASIC2.67□□□□□ -1.98
HERPUD2Q9BSE4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.67□□□□□ -1.98
HERPUD2Q9BSE4 MRPS36P4-201ENST00000534436 298 ntBASIC2.67□□□□□ -1.98
HERPUD2Q9BSE4 AL121579.1-201ENST00000555129 305 ntBASIC2.67□□□□□ -1.98
HERPUD2Q9BSE4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.67□□□□□ -1.98
HERPUD2Q9BSE4 MIR4513-201ENST00000581077 86 ntBASIC2.67□□□□□ -1.98
HERPUD2Q9BSE4 AC016727.1-205ENST00000605437 569 ntBASIC2.67□□□□□ -1.98
HERPUD2Q9BSE4 AL022345.1-201ENST00000607292 135 ntBASIC2.67□□□□□ -1.98
HERPUD2Q9BSE4 AC025253.1-201ENST00000613623 543 ntBASIC2.67□□□□□ -1.98
HERPUD2Q9BSE4 MIR1248-201ENST00000629190 106 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms