Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM56Q9BRZ2 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.97□□□□□ -1.77
TRIM56Q9BRZ2 SPRR2C-201ENST00000290702 219 ntBASIC3.97□□□□□ -1.77
TRIM56Q9BRZ2 RNU6-653P-201ENST00000363074 106 ntBASIC3.97□□□□□ -1.77
TRIM56Q9BRZ2 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.97□□□□□ -1.77
TRIM56Q9BRZ2 RNU6-1117P-201ENST00000384525 104 ntBASIC3.97□□□□□ -1.77
TRIM56Q9BRZ2 Y_RNA.580-201ENST00000391004 95 ntBASIC3.97□□□□□ -1.77
TRIM56Q9BRZ2 RNA5SP38-201ENST00000410750 119 ntBASIC3.97□□□□□ -1.77
TRIM56Q9BRZ2 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM56Q9BRZ2 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.97□□□□□ -1.77
TRIM56Q9BRZ2 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.97□□□□□ -1.77
TRIM56Q9BRZ2 snoU13.14-201ENST00000459372 104 ntBASIC3.97□□□□□ -1.77
TRIM56Q9BRZ2 AC090525.1-201ENST00000479116 478 ntBASIC3.97□□□□□ -1.77
TRIM56Q9BRZ2 AC012493.2-201ENST00000595083 291 ntBASIC3.97□□□□□ -1.77
TRIM56Q9BRZ2 AL133393.1-201ENST00000603277 287 ntBASIC3.97□□□□□ -1.77
TRIM56Q9BRZ2 AC091167.4-201ENST00000605079 184 ntBASIC3.97□□□□□ -1.77
TRIM56Q9BRZ2 AC004467.1-201ENST00000615678 330 ntBASIC3.97□□□□□ -1.77
TRIM56Q9BRZ2 AC092628.2-201ENST00000622492 339 ntBASIC3.97□□□□□ -1.77
TRIM56Q9BRZ2 AC091932.3-201ENST00000624223 323 ntBASIC3.97□□□□□ -1.77
TRIM56Q9BRZ2 snoU18.1-201ENST00000629629 71 ntBASIC3.97□□□□□ -1.77
TRIM56Q9BRZ2 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.97□□□□□ -1.77
TRIM56Q9BRZ2 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TRIM56Q9BRZ2 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 AC006504.1-201ENST00000562493 3666 ntBASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 RNU1-62P-201ENST00000362599 164 ntBASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 RNU6-1272P-201ENST00000362776 107 ntBASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 Y_RNA.101-201ENST00000363154 102 ntBASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 Y_RNA.272-201ENST00000364696 102 ntBASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 Y_RNA.571-201ENST00000384753 98 ntBASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 RNU6-750P-201ENST00000390946 107 ntBASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 RNU2-54P-201ENST00000410299 190 ntBASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 AL356095.1-201ENST00000417217 199 ntBASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 IFNA11P-201ENST00000446352 526 ntBASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 AC091179.3-201ENST00000474761 144 ntBASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 AIG1P1-201ENST00000503376 148 ntBASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 SNORA31.16-201ENST00000516773 139 ntBASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 RNA5SP179-201ENST00000517284 121 ntBASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 YPEL5P3-201ENST00000547227 352 ntBASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 RPS15AP11-201ENST00000594193 385 ntBASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 SNRPGP20-201ENST00000604477 205 ntBASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 MIR6867-201ENST00000610636 67 ntBASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 SNORD98-201ENST00000636377 67 ntBASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 IPO8P1-201ENST00000455509 3109 ntBASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
TRIM56Q9BRZ2 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM56Q9BRZ2 AC010889.1-201ENST00000566193 2666 ntBASIC3.95□□□□□ -1.78
TRIM56Q9BRZ2 SNORD50B-201ENST00000364995 70 ntBASIC3.95□□□□□ -1.78
TRIM56Q9BRZ2 Y_RNA.343-201ENST00000365354 112 ntBASIC3.95□□□□□ -1.78
TRIM56Q9BRZ2 SNORD116-18-201ENST00000383961 92 ntBASIC3.95□□□□□ -1.78
TRIM56Q9BRZ2 AL138878.1-201ENST00000405131 347 ntBASIC3.95□□□□□ -1.78
TRIM56Q9BRZ2 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.95□□□□□ -1.78
TRIM56Q9BRZ2 RNA5SP208-201ENST00000516156 78 ntBASIC3.95□□□□□ -1.78
TRIM56Q9BRZ2 MIR4429-201ENST00000580105 73 ntBASIC3.95□□□□□ -1.78
TRIM56Q9BRZ2 MIR3145-201ENST00000580727 82 ntBASIC3.95□□□□□ -1.78
TRIM56Q9BRZ2 AC006380.1-201ENST00000603598 186 ntBASIC3.95□□□□□ -1.78
TRIM56Q9BRZ2 AL162713.1-201ENST00000604480 262 ntBASIC3.95□□□□□ -1.78
TRIM56Q9BRZ2 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.95□□□□□ -1.78
TRIM56Q9BRZ2 MIR3674-201ENST00000636576 68 ntBASIC3.95□□□□□ -1.78
TRIM56Q9BRZ2 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM56Q9BRZ2 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM56Q9BRZ2 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.94□□□□□ -1.78
TRIM56Q9BRZ2 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM56Q9BRZ2 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM56Q9BRZ2 MIR423-201ENST00000362201 94 ntBASIC3.94□□□□□ -1.78
TRIM56Q9BRZ2 Y_RNA.7-201ENST00000362352 102 ntBASIC3.94□□□□□ -1.78
TRIM56Q9BRZ2 SNORA18.3-201ENST00000384122 132 ntBASIC3.94□□□□□ -1.78
TRIM56Q9BRZ2 MIR208B-201ENST00000401172 77 ntBASIC3.94□□□□□ -1.78
TRIM56Q9BRZ2 RNA5SP475-201ENST00000410568 110 ntBASIC3.94□□□□□ -1.78
TRIM56Q9BRZ2 ELOCP21-201ENST00000412558 336 ntBASIC3.94□□□□□ -1.78
TRIM56Q9BRZ2 BTF3P11-201ENST00000426582 477 ntBASIC3.94□□□□□ -1.78
TRIM56Q9BRZ2 AL049830.2-201ENST00000480072 201 ntBASIC3.94□□□□□ -1.78
TRIM56Q9BRZ2 HMGB3P3-201ENST00000510526 400 ntBASIC3.94□□□□□ -1.78
TRIM56Q9BRZ2 AC090877.1-201ENST00000561418 344 ntBASIC3.94□□□□□ -1.78
TRIM56Q9BRZ2 AC025281.1-201ENST00000567026 265 ntBASIC3.94□□□□□ -1.78
TRIM56Q9BRZ2 AL391813.1-201ENST00000603098 260 ntBASIC3.94□□□□□ -1.78
TRIM56Q9BRZ2 AC012531.5-201ENST00000611375 151 ntBASIC3.94□□□□□ -1.78
TRIM56Q9BRZ2 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.94□□□□□ -1.78
TRIM56Q9BRZ2 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM56Q9BRZ2 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM56Q9BRZ2 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM56Q9BRZ2 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM56Q9BRZ2 SNORD114-19-201ENST00000363072 75 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms