Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 RNU1-72P-201ENST00000362976 153 ntBASIC2.22□□□□□ -2.05
CDCA3Q99618 Y_RNA.140-201ENST00000363474 103 ntBASIC2.22□□□□□ -2.05
CDCA3Q99618 RNU6-1222P-201ENST00000384615 107 ntBASIC2.22□□□□□ -2.05
CDCA3Q99618 MTND1P23-201ENST00000416931 372 ntBASIC2.22□□□□□ -2.05
CDCA3Q99618 UBE2V1P4-201ENST00000425374 344 ntBASIC2.22□□□□□ -2.05
CDCA3Q99618 MTCO3P18-201ENST00000440206 761 ntBASIC2.22□□□□□ -2.05
CDCA3Q99618 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.22□□□□□ -2.05
CDCA3Q99618 AL031659.1-201ENST00000447075 539 ntBASIC2.22□□□□□ -2.05
CDCA3Q99618 RPL9P9-202ENST00000466501 579 ntBASIC2.22□□□□□ -2.05
CDCA3Q99618 RPS27P27-201ENST00000498779 255 ntBASIC2.22□□□□□ -2.05
CDCA3Q99618 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.22□□□□□ -2.05
CDCA3Q99618 AC018710.1-201ENST00000506509 158 ntBASIC2.22□□□□□ -2.05
CDCA3Q99618 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.22□□□□□ -2.05
CDCA3Q99618 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.22□□□□□ -2.05
CDCA3Q99618 RNU6-256P-201ENST00000516747 97 ntBASIC2.22□□□□□ -2.05
CDCA3Q99618 RNU6-273P-201ENST00000516937 96 ntBASIC2.22□□□□□ -2.05
CDCA3Q99618 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.22□□□□□ -2.05
CDCA3Q99618 AC100830.2-201ENST00000581636 240 ntBASIC2.22□□□□□ -2.05
CDCA3Q99618 MIR3942-201ENST00000585264 109 ntBASIC2.22□□□□□ -2.05
CDCA3Q99618 AL137847.3-201ENST00000611521 109 ntBASIC2.22□□□□□ -2.05
CDCA3Q99618 AL159153.1-201ENST00000619688 317 ntBASIC2.22□□□□□ -2.05
CDCA3Q99618 AL136221.1-201ENST00000621449 509 ntBASIC2.22□□□□□ -2.05
CDCA3Q99618 AC009033.1-201ENST00000624279 431 ntBASIC2.22□□□□□ -2.05
CDCA3Q99618 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.22□□□□□ -2.05
CDCA3Q99618 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
CDCA3Q99618 Y_RNA.4-201ENST00000362333 112 ntBASIC2.21□□□□□ -2.06
CDCA3Q99618 RNU6-655P-201ENST00000362858 107 ntBASIC2.21□□□□□ -2.06
CDCA3Q99618 RNU6-1317P-201ENST00000364582 104 ntBASIC2.21□□□□□ -2.06
CDCA3Q99618 U8.8-201ENST00000365399 135 ntBASIC2.21□□□□□ -2.06
CDCA3Q99618 RNU6-1032P-201ENST00000384100 107 ntBASIC2.21□□□□□ -2.06
CDCA3Q99618 RNU6-43P-201ENST00000384302 107 ntBASIC2.21□□□□□ -2.06
CDCA3Q99618 RNU6-831P-201ENST00000384548 107 ntBASIC2.21□□□□□ -2.06
CDCA3Q99618 RNU6-1072P-201ENST00000384703 107 ntBASIC2.21□□□□□ -2.06
CDCA3Q99618 RNU6-443P-201ENST00000384780 107 ntBASIC2.21□□□□□ -2.06
CDCA3Q99618 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.21□□□□□ -2.06
CDCA3Q99618 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.21□□□□□ -2.06
CDCA3Q99618 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.21□□□□□ -2.06
CDCA3Q99618 SNAP23P1-201ENST00000433229 246 ntBASIC2.21□□□□□ -2.06
CDCA3Q99618 TRBVA-201ENST00000498804 316 ntBASIC2.21□□□□□ -2.06
CDCA3Q99618 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.21□□□□□ -2.06
CDCA3Q99618 RN7SKP256-201ENST00000517201 314 ntBASIC2.21□□□□□ -2.06
CDCA3Q99618 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.21□□□□□ -2.06
CDCA3Q99618 AC107953.1-201ENST00000522216 297 ntBASIC2.21□□□□□ -2.06
CDCA3Q99618 PRELID2P1-201ENST00000552837 301 ntBASIC2.21□□□□□ -2.06
CDCA3Q99618 TRAV32-201ENST00000553993 340 ntBASIC2.21□□□□□ -2.06
CDCA3Q99618 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.21□□□□□ -2.06
CDCA3Q99618 AC060780.3-201ENST00000589464 80 ntBASIC2.21□□□□□ -2.06
CDCA3Q99618 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.21□□□□□ -2.06
CDCA3Q99618 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
CDCA3Q99618 AL138726.1-201ENST00000614873 333 ntBASIC2.21□□□□□ -2.06
CDCA3Q99618 AC009233.1-201ENST00000616477 371 ntBASIC2.21□□□□□ -2.06
CDCA3Q99618 MIR5739-201ENST00000619803 80 ntBASIC2.21□□□□□ -2.06
CDCA3Q99618 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CDCA3Q99618 MTND4P23-201ENST00000447723 1363 ntBASIC2.21□□□□□ -2.06
CDCA3Q99618 CASC19-280ENST00000642102 1351 ntBASIC2.21□□□□□ -2.06
CDCA3Q99618 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.2□□□□□ -2.06
CDCA3Q99618 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CDCA3Q99618 RNU1-17P-201ENST00000363022 152 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 RNA5SP125-201ENST00000364843 120 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 RNU6-128P-201ENST00000383976 107 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
CDCA3Q99618 AL356776.1-201ENST00000406574 447 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 RNU2-2P-201ENST00000410396 191 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 AIMP1P2-201ENST00000425294 312 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.2□□□□□ -2.06
CDCA3Q99618 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.2□□□□□ -2.06
CDCA3Q99618 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.2□□□□□ -2.06
CDCA3Q99618 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.2□□□□□ -2.06
CDCA3Q99618 RNU7-26P-201ENST00000458980 63 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 AL121594.1-201ENST00000475906 575 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 RPL30P1-201ENST00000488676 339 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 AF213884.2-201ENST00000510417 903 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 RNU4-49P-201ENST00000516080 140 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.2□□□□□ -2.06
CDCA3Q99618 AC093249.1-201ENST00000567049 203 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 MIR4498-201ENST00000577599 66 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 AC091135.1-201ENST00000585943 307 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 AP001836.1-201ENST00000604675 523 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 AL138963.2-201ENST00000605137 226 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 U2.15-201ENST00000611544 191 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 U2.16-201ENST00000613119 191 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 U2.12-201ENST00000613778 191 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 U2.20-201ENST00000613956 192 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 U2.9-201ENST00000615427 191 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 U2.11-201ENST00000616345 191 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 U2.2-201ENST00000616535 191 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 U2.3-201ENST00000617785 191 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 U2.19-201ENST00000618602 191 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 RNU2-1-201ENST00000618664 191 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 U2.6-201ENST00000619225 191 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 U2.5-201ENST00000619465 191 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 U2.10-201ENST00000620268 191 ntBASIC2.2□□□□□ -2.06
CDCA3Q99618 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
CDCA3Q99618 RNU6-1285P-201ENST00000363480 105 ntBASIC2.19□□□□□ -2.06
CDCA3Q99618 RNU6-1210P-201ENST00000363775 107 ntBASIC2.19□□□□□ -2.06
CDCA3Q99618 AL030996.1-201ENST00000411430 235 ntBASIC2.19□□□□□ -2.06
CDCA3Q99618 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.19□□□□□ -2.06
CDCA3Q99618 RPL23AP36-201ENST00000413895 458 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 202.9 ms