Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 Z75741.1-201ENST00000446793 314 ntBASIC4.31□□□□□ -1.72
CALR3Q96L12 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.31□□□□□ -1.72
CALR3Q96L12 RNU6-861P-201ENST00000516745 106 ntBASIC4.31□□□□□ -1.72
CALR3Q96L12 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.31□□□□□ -1.72
CALR3Q96L12 AC002064.3-201ENST00000623448 346 ntBASIC4.31□□□□□ -1.72
CALR3Q96L12 AC008873.1-201ENST00000625051 138 ntBASIC4.31□□□□□ -1.72
CALR3Q96L12 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CALR3Q96L12 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.31□□□□□ -1.72
CALR3Q96L12 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CALR3Q96L12 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CALR3Q96L12 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.3□□□□□ -1.72
CALR3Q96L12 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.3□□□□□ -1.72
CALR3Q96L12 AL500522.2-201ENST00000448562 343 ntBASIC4.3□□□□□ -1.72
CALR3Q96L12 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.3□□□□□ -1.72
CALR3Q96L12 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.3□□□□□ -1.72
CALR3Q96L12 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.3□□□□□ -1.72
CALR3Q96L12 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.3□□□□□ -1.72
CALR3Q96L12 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CALR3Q96L12 AC091152.2-201ENST00000591628 2569 ntBASIC4.3□□□□□ -1.72
CALR3Q96L12 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CALR3Q96L12 MFSD8-216ENST00000641147 4009 ntBASIC4.3□□□□□ -1.72
CALR3Q96L12 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CALR3Q96L12 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.29□□□□□ -1.72
CALR3Q96L12 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CALR3Q96L12 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CALR3Q96L12 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CALR3Q96L12 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.29□□□□□ -1.72
CALR3Q96L12 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
CALR3Q96L12 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.29□□□□□ -1.72
CALR3Q96L12 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CALR3Q96L12 RNU6-1272P-201ENST00000362776 107 ntBASIC4.29□□□□□ -1.72
CALR3Q96L12 RNU1-132P-201ENST00000364300 164 ntBASIC4.29□□□□□ -1.72
CALR3Q96L12 Y_RNA.262-201ENST00000364641 102 ntBASIC4.29□□□□□ -1.72
CALR3Q96L12 RNU6-211P-201ENST00000384047 107 ntBASIC4.29□□□□□ -1.72
CALR3Q96L12 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.29□□□□□ -1.72
CALR3Q96L12 AC109925.1-201ENST00000478069 331 ntBASIC4.29□□□□□ -1.72
CALR3Q96L12 RN7SL826P-201ENST00000479724 288 ntBASIC4.29□□□□□ -1.72
CALR3Q96L12 SRIP1-201ENST00000489235 288 ntBASIC4.29□□□□□ -1.72
CALR3Q96L12 AC140059.1-201ENST00000489238 361 ntBASIC4.29□□□□□ -1.72
CALR3Q96L12 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.29□□□□□ -1.72
CALR3Q96L12 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.29□□□□□ -1.72
CALR3Q96L12 RNU6-1231P-201ENST00000517185 103 ntBASIC4.29□□□□□ -1.72
CALR3Q96L12 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.29□□□□□ -1.72
CALR3Q96L12 AC009127.3-201ENST00000570531 403 ntBASIC4.29□□□□□ -1.72
CALR3Q96L12 MIR5684-201ENST00000585074 65 ntBASIC4.29□□□□□ -1.72
CALR3Q96L12 XIST_intron.1-201ENST00000619444 68 ntBASIC4.29□□□□□ -1.72
CALR3Q96L12 U6.98-201ENST00000637157 84 ntBASIC4.29□□□□□ -1.72
CALR3Q96L12 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.28□□□□□ -1.72
CALR3Q96L12 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CALR3Q96L12 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CALR3Q96L12 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
CALR3Q96L12 RNU6-923P-201ENST00000364753 107 ntBASIC4.28□□□□□ -1.72
CALR3Q96L12 Y_RNA.304-201ENST00000365011 112 ntBASIC4.28□□□□□ -1.72
CALR3Q96L12 CD24P4-201ENST00000382840 243 ntBASIC4.28□□□□□ -1.72
CALR3Q96L12 MIR586-201ENST00000385035 97 ntBASIC4.28□□□□□ -1.72
CALR3Q96L12 RNU6-918P-201ENST00000391219 106 ntBASIC4.28□□□□□ -1.72
CALR3Q96L12 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.28□□□□□ -1.72
CALR3Q96L12 RAC1P5-201ENST00000512182 576 ntBASIC4.28□□□□□ -1.72
CALR3Q96L12 RNU5F-4P-201ENST00000516581 114 ntBASIC4.28□□□□□ -1.72
CALR3Q96L12 RNA5SP143-201ENST00000516936 115 ntBASIC4.28□□□□□ -1.72
CALR3Q96L12 AC022559.1-201ENST00000520905 205 ntBASIC4.28□□□□□ -1.72
CALR3Q96L12 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CALR3Q96L12 AC025627.2-201ENST00000576220 160 ntBASIC4.28□□□□□ -1.72
CALR3Q96L12 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CALR3Q96L12 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.28□□□□□ -1.72
CALR3Q96L12 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.28□□□□□ -1.72
CALR3Q96L12 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.28□□□□□ -1.72
CALR3Q96L12 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CALR3Q96L12 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CALR3Q96L12 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
CALR3Q96L12 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CALR3Q96L12 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.27□□□□□ -1.73
CALR3Q96L12 SNORD35B-201ENST00000363660 87 ntBASIC4.27□□□□□ -1.73
CALR3Q96L12 SNORD115-30-201ENST00000364117 82 ntBASIC4.27□□□□□ -1.73
CALR3Q96L12 RNU6-1305P-201ENST00000364353 104 ntBASIC4.27□□□□□ -1.73
CALR3Q96L12 Y_RNA.308-201ENST00000365043 101 ntBASIC4.27□□□□□ -1.73
CALR3Q96L12 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.27□□□□□ -1.73
CALR3Q96L12 BTF3P11-201ENST00000426582 477 ntBASIC4.27□□□□□ -1.73
CALR3Q96L12 AL772161.1-201ENST00000439130 476 ntBASIC4.27□□□□□ -1.73
CALR3Q96L12 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.27□□□□□ -1.73
CALR3Q96L12 RBMY2UP-201ENST00000453474 324 ntBASIC4.27□□□□□ -1.73
CALR3Q96L12 RNY3P16-201ENST00000516338 101 ntBASIC4.27□□□□□ -1.73
CALR3Q96L12 RNU6-1098P-201ENST00000516772 96 ntBASIC4.27□□□□□ -1.73
CALR3Q96L12 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.27□□□□□ -1.73
CALR3Q96L12 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.27□□□□□ -1.73
CALR3Q96L12 AL365265.1-201ENST00000621045 234 ntBASIC4.27□□□□□ -1.73
CALR3Q96L12 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.27□□□□□ -1.73
CALR3Q96L12 AL034408.1-202ENST00000636088 415 ntBASIC4.27□□□□□ -1.73
CALR3Q96L12 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CALR3Q96L12 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CALR3Q96L12 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CALR3Q96L12 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CALR3Q96L12 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CALR3Q96L12 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CALR3Q96L12 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CALR3Q96L12 Y_RNA.233-201ENST00000364407 101 ntBASIC4.26□□□□□ -1.73
CALR3Q96L12 Y_RNA.243-201ENST00000364481 109 ntBASIC4.26□□□□□ -1.73
CALR3Q96L12 RNA5SP366-201ENST00000365454 123 ntBASIC4.26□□□□□ -1.73
CALR3Q96L12 RNU6-1027P-201ENST00000383998 107 ntBASIC4.26□□□□□ -1.73
CALR3Q96L12 MIR548B-201ENST00000385247 97 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms