Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AP000889.1-201ENST00000530968 660 ntBASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 AP003072.1-201ENST00000531740 145 ntBASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 AC079598.5-201ENST00000547460 117 ntBASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 AL442663.2-201ENST00000554385 511 ntBASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 SUB1P3-201ENST00000564581 315 ntBASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 MIR3605-201ENST00000583214 100 ntBASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 AC073410.2-201ENST00000603240 332 ntBASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 AL356280.1-201ENST00000603614 379 ntBASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 SNRPGP17-201ENST00000603780 214 ntBASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 AL159153.1-201ENST00000619688 317 ntBASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 Z75746.1-201ENST00000440243 2080 ntBASIC3.14□□□□□ -1.91
CDK5RAP3Q96JB5 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.13□□□□□ -1.91
CDK5RAP3Q96JB5 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.13□□□□□ -1.91
CDK5RAP3Q96JB5 AC092268.1-201ENST00000342691 405 ntBASIC3.13□□□□□ -1.91
CDK5RAP3Q96JB5 Y_RNA.40-201ENST00000362645 93 ntBASIC3.13□□□□□ -1.91
CDK5RAP3Q96JB5 Y_RNA.216-201ENST00000364205 93 ntBASIC3.13□□□□□ -1.91
CDK5RAP3Q96JB5 SNORA36A-201ENST00000384221 132 ntBASIC3.13□□□□□ -1.91
CDK5RAP3Q96JB5 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.13□□□□□ -1.91
CDK5RAP3Q96JB5 AC097463.2-201ENST00000421074 142 ntBASIC3.13□□□□□ -1.91
CDK5RAP3Q96JB5 AL590135.1-201ENST00000422215 156 ntBASIC3.13□□□□□ -1.91
CDK5RAP3Q96JB5 AC019205.3-201ENST00000424573 156 ntBASIC3.13□□□□□ -1.91
CDK5RAP3Q96JB5 RPL23AP83-201ENST00000434984 473 ntBASIC3.13□□□□□ -1.91
CDK5RAP3Q96JB5 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.13□□□□□ -1.91
CDK5RAP3Q96JB5 AC016700.2-201ENST00000446011 156 ntBASIC3.13□□□□□ -1.91
CDK5RAP3Q96JB5 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.13□□□□□ -1.91
CDK5RAP3Q96JB5 AC003982.1-202ENST00000469928 248 ntBASIC3.13□□□□□ -1.91
CDK5RAP3Q96JB5 AC103975.1-201ENST00000482506 483 ntBASIC3.13□□□□□ -1.91
CDK5RAP3Q96JB5 AC090096.1-201ENST00000489168 390 ntBASIC3.13□□□□□ -1.91
CDK5RAP3Q96JB5 AC015911.1-201ENST00000495111 156 ntBASIC3.13□□□□□ -1.91
CDK5RAP3Q96JB5 AC109329.1-201ENST00000518744 317 ntBASIC3.13□□□□□ -1.91
CDK5RAP3Q96JB5 AL590705.4-201ENST00000532209 134 ntBASIC3.13□□□□□ -1.91
CDK5RAP3Q96JB5 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.13□□□□□ -1.91
CDK5RAP3Q96JB5 ANP32BP3-201ENST00000559213 706 ntBASIC3.13□□□□□ -1.91
CDK5RAP3Q96JB5 MIR3199-1-201ENST00000582434 88 ntBASIC3.13□□□□□ -1.91
CDK5RAP3Q96JB5 MIR3616-201ENST00000584070 92 ntBASIC3.13□□□□□ -1.91
CDK5RAP3Q96JB5 7SK.7-201ENST00000603504 247 ntBASIC3.13□□□□□ -1.91
CDK5RAP3Q96JB5 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CDK5RAP3Q96JB5 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CDK5RAP3Q96JB5 Y_RNA.112-201ENST00000363250 102 ntBASIC3.12□□□□□ -1.91
CDK5RAP3Q96JB5 Y_RNA.428-201ENST00000384078 102 ntBASIC3.12□□□□□ -1.91
CDK5RAP3Q96JB5 SNORA29-201ENST00000384183 140 ntBASIC3.12□□□□□ -1.91
CDK5RAP3Q96JB5 RNU1-57P-201ENST00000384491 166 ntBASIC3.12□□□□□ -1.91
CDK5RAP3Q96JB5 MIR186-201ENST00000384988 86 ntBASIC3.12□□□□□ -1.91
CDK5RAP3Q96JB5 RNU6-700P-201ENST00000391043 107 ntBASIC3.12□□□□□ -1.91
CDK5RAP3Q96JB5 CYCSP48-201ENST00000417124 323 ntBASIC3.12□□□□□ -1.91
CDK5RAP3Q96JB5 MRPS18CP6-201ENST00000423587 223 ntBASIC3.12□□□□□ -1.91
CDK5RAP3Q96JB5 AC087499.2-201ENST00000432861 149 ntBASIC3.12□□□□□ -1.91
CDK5RAP3Q96JB5 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.12□□□□□ -1.91
CDK5RAP3Q96JB5 RPS29P6-201ENST00000438196 145 ntBASIC3.12□□□□□ -1.91
CDK5RAP3Q96JB5 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.12□□□□□ -1.91
CDK5RAP3Q96JB5 AL035666.1-201ENST00000446195 348 ntBASIC3.12□□□□□ -1.91
CDK5RAP3Q96JB5 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.12□□□□□ -1.91
CDK5RAP3Q96JB5 AC105758.1-201ENST00000506038 399 ntBASIC3.12□□□□□ -1.91
CDK5RAP3Q96JB5 SNORA74D-201ENST00000516404 141 ntBASIC3.12□□□□□ -1.91
CDK5RAP3Q96JB5 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.12□□□□□ -1.91
CDK5RAP3Q96JB5 ELOCP31-201ENST00000540463 467 ntBASIC3.12□□□□□ -1.91
CDK5RAP3Q96JB5 MIR3200-201ENST00000580767 85 ntBASIC3.12□□□□□ -1.91
CDK5RAP3Q96JB5 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 AP000560.1-201ENST00000624150 1937 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 Y_RNA.252-201ENST00000364556 101 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 RNU4-9P-201ENST00000364951 139 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 SNORA18.3-201ENST00000384122 132 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 Y_RNA.577-201ENST00000384794 101 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 MIR218-1-201ENST00000384999 110 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 SNORD88.1-201ENST00000408684 91 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 RNA5SP494-201ENST00000410653 129 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 HMGN2P35-201ENST00000412164 270 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 AL358453.1-201ENST00000422522 250 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 PMCHL1-202ENST00000423102 261 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 AC092423.1-201ENST00000430165 186 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 MTCO3P29-201ENST00000432119 779 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 RN7SKP210-201ENST00000459176 261 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 AC090525.1-201ENST00000479116 478 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 AL163540.1-201ENST00000485382 386 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 RPL30P10-201ENST00000488148 337 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 RPL23AP75-201ENST00000491601 451 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 AC021146.2-201ENST00000504736 556 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 AC023141.11-201ENST00000508864 202 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 RNA5SP112-201ENST00000515937 99 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 SNORA31.16-201ENST00000516773 139 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 Y_RNA.711-201ENST00000516993 102 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 SNORD116.3-201ENST00000517176 78 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 AC016256.1-201ENST00000547971 354 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 AC021231.3-201ENST00000558497 370 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 AC004584.2-201ENST00000570407 410 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 MIR5701-3-201ENST00000578890 82 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 MIR5701-1-201ENST00000585138 82 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 MIR1244-1-201ENST00000612829 85 ntBASIC3.11□□□□□ -1.91
CDK5RAP3Q96JB5 MIR5701-2-201ENST00000615634 82 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms