Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 RNU6-192P-201ENST00000391253 100 ntBASIC2.04□□□□□ -2.08
SNRNP40Q96DI7 SRIP3-201ENST00000413200 219 ntBASIC2.04□□□□□ -2.08
SNRNP40Q96DI7 MTCO1P21-201ENST00000416634 589 ntBASIC2.04□□□□□ -2.08
SNRNP40Q96DI7 SNRPEP10-201ENST00000420249 274 ntBASIC2.04□□□□□ -2.08
SNRNP40Q96DI7 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.04□□□□□ -2.08
SNRNP40Q96DI7 AC018634.1-201ENST00000437554 401 ntBASIC2.04□□□□□ -2.08
SNRNP40Q96DI7 AL031659.1-201ENST00000447075 539 ntBASIC2.04□□□□□ -2.08
SNRNP40Q96DI7 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.04□□□□□ -2.08
SNRNP40Q96DI7 U8.21-201ENST00000459536 136 ntBASIC2.04□□□□□ -2.08
SNRNP40Q96DI7 PTP4A1P4-201ENST00000512479 322 ntBASIC2.04□□□□□ -2.08
SNRNP40Q96DI7 SNORA31.16-201ENST00000516773 139 ntBASIC2.04□□□□□ -2.08
SNRNP40Q96DI7 AC104576.1-201ENST00000524225 88 ntBASIC2.04□□□□□ -2.08
SNRNP40Q96DI7 AC078814.3-201ENST00000553036 491 ntBASIC2.04□□□□□ -2.08
SNRNP40Q96DI7 AC121758.2-201ENST00000553271 193 ntBASIC2.04□□□□□ -2.08
SNRNP40Q96DI7 AC121333.1-201ENST00000567488 2709 ntBASIC2.04□□□□□ -2.08
SNRNP40Q96DI7 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.04□□□□□ -2.08
SNRNP40Q96DI7 OR4G1P-203ENST00000641984 1631 ntBASIC2.04□□□□□ -2.08
SNRNP40Q96DI7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.04□□□□□ -2.08
SNRNP40Q96DI7 AC009541.1-201ENST00000438279 2662 ntBASIC2.04□□□□□ -2.08
SNRNP40Q96DI7 AC233981.2-201ENST00000611524 1614 ntBASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 RNU4-15P-201ENST00000362613 141 ntBASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 Y_RNA.256-201ENST00000364594 104 ntBASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 SNORA16B-201ENST00000364674 135 ntBASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 SNORD14D-201ENST00000384390 87 ntBASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 MIR144-201ENST00000384886 86 ntBASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 SNORA46.1-201ENST00000391069 153 ntBASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 EIF4E2P1-201ENST00000393781 255 ntBASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 SNORA11.4-201ENST00000408823 129 ntBASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 RNU2-48P-201ENST00000410694 191 ntBASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 AP000275.1-201ENST00000411943 390 ntBASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 MRPS10P2-201ENST00000431226 381 ntBASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 AL133396.1-201ENST00000432048 687 ntBASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 IPO7P1-201ENST00000442031 636 ntBASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 AC132942.1-201ENST00000486753 483 ntBASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 RNU6-1069P-201ENST00000516612 133 ntBASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 IGLV3-17-201ENST00000519099 244 ntBASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 AC021231.3-201ENST00000558497 370 ntBASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 AC109446.1-201ENST00000566172 220 ntBASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 RNU6-89P-201ENST00000606519 100 ntBASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 AC009318.2-201ENST00000610917 651 ntBASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 AC122108.2-201ENST00000611946 526 ntBASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SNRNP40Q96DI7 AC245060.5-201ENST00000610778 3293 ntBASIC2.02□□□□□ -2.09
SNRNP40Q96DI7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.02□□□□□ -2.09
SNRNP40Q96DI7 MIR17-201ENST00000385012 84 ntBASIC2.02□□□□□ -2.09
SNRNP40Q96DI7 SNORA12-201ENST00000391162 147 ntBASIC2.02□□□□□ -2.09
SNRNP40Q96DI7 AL357139.1-201ENST00000407792 426 ntBASIC2.02□□□□□ -2.09
SNRNP40Q96DI7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.02□□□□□ -2.09
SNRNP40Q96DI7 ERLEC1P1-201ENST00000433806 578 ntBASIC2.02□□□□□ -2.09
SNRNP40Q96DI7 UBE2V1P8-201ENST00000437166 265 ntBASIC2.02□□□□□ -2.09
SNRNP40Q96DI7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SNRNP40Q96DI7 AC104564.1-201ENST00000493028 407 ntBASIC2.02□□□□□ -2.09
SNRNP40Q96DI7 AC011352.1-201ENST00000512300 793 ntBASIC2.02□□□□□ -2.09
SNRNP40Q96DI7 RNU6-612P-201ENST00000516909 102 ntBASIC2.02□□□□□ -2.09
SNRNP40Q96DI7 AP000889.2-201ENST00000532684 490 ntBASIC2.02□□□□□ -2.09
SNRNP40Q96DI7 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.02□□□□□ -2.09
SNRNP40Q96DI7 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.02□□□□□ -2.09
SNRNP40Q96DI7 AC010525.2-201ENST00000590920 195 ntBASIC2.02□□□□□ -2.09
SNRNP40Q96DI7 BNIP3P25-201ENST00000596023 559 ntBASIC2.02□□□□□ -2.09
SNRNP40Q96DI7 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.02□□□□□ -2.09
SNRNP40Q96DI7 MIR3688-2-201ENST00000636963 87 ntBASIC2.02□□□□□ -2.09
SNRNP40Q96DI7 AC073869.6-201ENST00000640656 341 ntBASIC2.02□□□□□ -2.09
SNRNP40Q96DI7 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.02□□□□□ -2.09
SNRNP40Q96DI7 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SNRNP40Q96DI7 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.02□□□□□ -2.09
SNRNP40Q96DI7 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
SNRNP40Q96DI7 AL596028.1-201ENST00000326971 197 ntBASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 RNU4-12P-201ENST00000365233 139 ntBASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 AL023284.1-201ENST00000403956 276 ntBASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 MIR548F1-201ENST00000408667 84 ntBASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 RPL23AP95-201ENST00000426806 265 ntBASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 MTND1P4-201ENST00000435196 415 ntBASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 AL359672.1-201ENST00000442302 409 ntBASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 HMGN2P26-201ENST00000463169 339 ntBASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 RPL9P9-202ENST00000466501 579 ntBASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 RPS29P25-201ENST00000481709 171 ntBASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 AC008628.2-201ENST00000502605 298 ntBASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 AC114801.2-201ENST00000503825 781 ntBASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 AC093259.1-201ENST00000509755 300 ntBASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 MIR449C-201ENST00000516047 92 ntBASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 AP005660.1-201ENST00000522972 293 ntBASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 AP005597.4-201ENST00000526762 229 ntBASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 MIR5692C1-201ENST00000585309 91 ntBASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.01□□□□□ -2.09
SNRNP40Q96DI7 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms