Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RNA5SP503-201ENST00000517047 117 ntBASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 MIR4498-201ENST00000577599 66 ntBASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 AC245014.2-201ENST00000603689 287 ntBASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 AC246785.4-201ENST00000605374 287 ntBASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 MIR98-201ENST00000606724 119 ntBASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 MIR8074-201ENST00000615081 81 ntBASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 AL450472.1-202ENST00000637286 180 ntBASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 AC233981.2-201ENST00000611524 1614 ntBASIC1.37□□□□□ -2.19
ECHDC3Q96DC8 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
ECHDC3Q96DC8 RNU6-112P-201ENST00000363599 104 ntBASIC1.36□□□□□ -2.19
ECHDC3Q96DC8 RNU4-91P-201ENST00000364778 135 ntBASIC1.36□□□□□ -2.19
ECHDC3Q96DC8 RNU6-439P-201ENST00000384188 106 ntBASIC1.36□□□□□ -2.19
ECHDC3Q96DC8 RNU6-393P-201ENST00000384475 107 ntBASIC1.36□□□□□ -2.19
ECHDC3Q96DC8 Y_RNA.595-201ENST00000410403 105 ntBASIC1.36□□□□□ -2.19
ECHDC3Q96DC8 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.36□□□□□ -2.19
ECHDC3Q96DC8 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.36□□□□□ -2.19
ECHDC3Q96DC8 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.36□□□□□ -2.19
ECHDC3Q96DC8 SDAD1P3-201ENST00000427380 333 ntBASIC1.36□□□□□ -2.19
ECHDC3Q96DC8 MTCO1P44-201ENST00000441935 243 ntBASIC1.36□□□□□ -2.19
ECHDC3Q96DC8 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.36□□□□□ -2.19
ECHDC3Q96DC8 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.36□□□□□ -2.19
ECHDC3Q96DC8 AC009474.2-201ENST00000451383 136 ntBASIC1.36□□□□□ -2.19
ECHDC3Q96DC8 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.36□□□□□ -2.19
ECHDC3Q96DC8 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.36□□□□□ -2.19
ECHDC3Q96DC8 AC005741.1-201ENST00000511094 432 ntBASIC1.36□□□□□ -2.19
ECHDC3Q96DC8 AC108729.3-201ENST00000513484 108 ntBASIC1.36□□□□□ -2.19
ECHDC3Q96DC8 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.36□□□□□ -2.19
ECHDC3Q96DC8 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.36□□□□□ -2.19
ECHDC3Q96DC8 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.36□□□□□ -2.19
ECHDC3Q96DC8 AC110760.3-201ENST00000598794 467 ntBASIC1.36□□□□□ -2.19
ECHDC3Q96DC8 AC012507.3-201ENST00000603556 477 ntBASIC1.36□□□□□ -2.19
ECHDC3Q96DC8 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.36□□□□□ -2.19
ECHDC3Q96DC8 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
ECHDC3Q96DC8 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.35□□□□□ -2.19
ECHDC3Q96DC8 FGF7P2-201ENST00000332473 296 ntBASIC1.35□□□□□ -2.19
ECHDC3Q96DC8 SNORA7.1-201ENST00000363750 139 ntBASIC1.35□□□□□ -2.19
ECHDC3Q96DC8 Y_RNA.338-201ENST00000365320 114 ntBASIC1.35□□□□□ -2.19
ECHDC3Q96DC8 RNU6-282P-201ENST00000365357 103 ntBASIC1.35□□□□□ -2.19
ECHDC3Q96DC8 RNU6-434P-201ENST00000384376 107 ntBASIC1.35□□□□□ -2.19
ECHDC3Q96DC8 RNU6-296P-201ENST00000384608 107 ntBASIC1.35□□□□□ -2.19
ECHDC3Q96DC8 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.35□□□□□ -2.19
ECHDC3Q96DC8 AL590135.1-201ENST00000422215 156 ntBASIC1.35□□□□□ -2.19
ECHDC3Q96DC8 AC019205.3-201ENST00000424573 156 ntBASIC1.35□□□□□ -2.19
ECHDC3Q96DC8 PRPS1P1-201ENST00000445305 876 ntBASIC1.35□□□□□ -2.19
ECHDC3Q96DC8 AC016700.2-201ENST00000446011 156 ntBASIC1.35□□□□□ -2.19
ECHDC3Q96DC8 RPS29P29-201ENST00000456396 171 ntBASIC1.35□□□□□ -2.19
ECHDC3Q96DC8 RPS29P15-201ENST00000458329 171 ntBASIC1.35□□□□□ -2.19
ECHDC3Q96DC8 RNU1-123P-201ENST00000458950 160 ntBASIC1.35□□□□□ -2.19
ECHDC3Q96DC8 RNA5SP269-201ENST00000459032 137 ntBASIC1.35□□□□□ -2.19
ECHDC3Q96DC8 AC087477.1-201ENST00000465747 340 ntBASIC1.35□□□□□ -2.19
ECHDC3Q96DC8 AC005908.1-201ENST00000468701 347 ntBASIC1.35□□□□□ -2.19
ECHDC3Q96DC8 AC015911.1-201ENST00000495111 156 ntBASIC1.35□□□□□ -2.19
ECHDC3Q96DC8 ATP5EP1-201ENST00000510257 156 ntBASIC1.35□□□□□ -2.19
ECHDC3Q96DC8 RNU1-92P-201ENST00000517017 135 ntBASIC1.35□□□□□ -2.19
ECHDC3Q96DC8 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.35□□□□□ -2.19
ECHDC3Q96DC8 AC012414.6-201ENST00000568241 401 ntBASIC1.35□□□□□ -2.19
ECHDC3Q96DC8 MIR3660-201ENST00000584845 100 ntBASIC1.35□□□□□ -2.19
ECHDC3Q96DC8 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
ECHDC3Q96DC8 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
ECHDC3Q96DC8 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
ECHDC3Q96DC8 Y_RNA.399-201ENST00000383955 105 ntBASIC1.34□□□□□ -2.19
ECHDC3Q96DC8 RNU6-606P-201ENST00000384721 111 ntBASIC1.34□□□□□ -2.19
ECHDC3Q96DC8 SNORD70.1-201ENST00000391007 85 ntBASIC1.34□□□□□ -2.19
ECHDC3Q96DC8 FGF7P8-201ENST00000402994 292 ntBASIC1.34□□□□□ -2.19
ECHDC3Q96DC8 MTND2P18-201ENST00000419962 1030 ntBASIC1.34□□□□□ -2.19
ECHDC3Q96DC8 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.34□□□□□ -2.19
ECHDC3Q96DC8 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.34□□□□□ -2.19
ECHDC3Q96DC8 AL445567.1-201ENST00000439121 144 ntBASIC1.34□□□□□ -2.19
ECHDC3Q96DC8 AL133217.1-201ENST00000450980 425 ntBASIC1.34□□□□□ -2.19
ECHDC3Q96DC8 RPS29P23-201ENST00000458635 123 ntBASIC1.34□□□□□ -2.19
ECHDC3Q96DC8 snoU13.9-201ENST00000458927 103 ntBASIC1.34□□□□□ -2.19
ECHDC3Q96DC8 AC004223.1-201ENST00000479840 271 ntBASIC1.34□□□□□ -2.19
ECHDC3Q96DC8 FO393415.2-201ENST00000480085 343 ntBASIC1.34□□□□□ -2.19
ECHDC3Q96DC8 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.34□□□□□ -2.19
ECHDC3Q96DC8 MTCYBP35-201ENST00000503630 1137 ntBASIC1.34□□□□□ -2.19
ECHDC3Q96DC8 SNORA18.6-201ENST00000516792 115 ntBASIC1.34□□□□□ -2.19
ECHDC3Q96DC8 AC060788.1-201ENST00000521318 469 ntBASIC1.34□□□□□ -2.19
ECHDC3Q96DC8 AP003033.1-201ENST00000527244 415 ntBASIC1.34□□□□□ -2.19
ECHDC3Q96DC8 AC109446.2-201ENST00000567872 497 ntBASIC1.34□□□□□ -2.19
ECHDC3Q96DC8 AGGF1P4-201ENST00000568249 801 ntBASIC1.34□□□□□ -2.19
ECHDC3Q96DC8 AC091805.2-201ENST00000603848 235 ntBASIC1.34□□□□□ -2.19
ECHDC3Q96DC8 PRR13P7-201ENST00000605538 430 ntBASIC1.34□□□□□ -2.19
ECHDC3Q96DC8 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
ECHDC3Q96DC8 PCGEM1.1-201ENST00000613431 131 ntBASIC1.34□□□□□ -2.19
ECHDC3Q96DC8 AC007494.3-201ENST00000624660 743 ntBASIC1.34□□□□□ -2.19
ECHDC3Q96DC8 AC068205.3-201ENST00000636385 468 ntBASIC1.34□□□□□ -2.19
ECHDC3Q96DC8 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
ECHDC3Q96DC8 AC092268.1-201ENST00000342691 405 ntBASIC1.33□□□□□ -2.2
ECHDC3Q96DC8 RNU6-203P-201ENST00000384038 104 ntBASIC1.33□□□□□ -2.2
ECHDC3Q96DC8 SNORA12.2-201ENST00000391040 156 ntBASIC1.33□□□□□ -2.2
ECHDC3Q96DC8 PIGFP2-201ENST00000421400 651 ntBASIC1.33□□□□□ -2.2
ECHDC3Q96DC8 AC133104.1-201ENST00000429100 218 ntBASIC1.33□□□□□ -2.2
ECHDC3Q96DC8 VN1R108P-201ENST00000431580 830 ntBASIC1.33□□□□□ -2.2
ECHDC3Q96DC8 AC022364.2-201ENST00000457963 554 ntBASIC1.33□□□□□ -2.2
ECHDC3Q96DC8 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms