Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 MIR578-201ENST00000384828 96 ntBASIC0.3□□□□□ -2.36
AP3S1Q92572 MTND3P20-201ENST00000407663 186 ntBASIC0.3□□□□□ -2.36
AP3S1Q92572 RNA5SP201-201ENST00000410316 124 ntBASIC0.3□□□□□ -2.36
AP3S1Q92572 Y_RNA.595-201ENST00000410403 105 ntBASIC0.3□□□□□ -2.36
AP3S1Q92572 HIGD1AP15-201ENST00000416198 280 ntBASIC0.3□□□□□ -2.36
AP3S1Q92572 AC060773.1-201ENST00000421698 310 ntBASIC0.3□□□□□ -2.36
AP3S1Q92572 AC092423.1-201ENST00000430165 186 ntBASIC0.3□□□□□ -2.36
AP3S1Q92572 RPS25P9-201ENST00000435591 252 ntBASIC0.3□□□□□ -2.36
AP3S1Q92572 AC092628.1-201ENST00000436250 252 ntBASIC0.3□□□□□ -2.36
AP3S1Q92572 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.3□□□□□ -2.36
AP3S1Q92572 SNRPFP3-201ENST00000457792 225 ntBASIC0.3□□□□□ -2.36
AP3S1Q92572 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.3□□□□□ -2.36
AP3S1Q92572 AC113410.1-201ENST00000505029 247 ntBASIC0.3□□□□□ -2.36
AP3S1Q92572 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.3□□□□□ -2.36
AP3S1Q92572 RNU4-57P-201ENST00000515980 135 ntBASIC0.3□□□□□ -2.36
AP3S1Q92572 AC007834.2-201ENST00000536310 343 ntBASIC0.3□□□□□ -2.36
AP3S1Q92572 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.3□□□□□ -2.36
AP3S1Q92572 AC087894.1-201ENST00000538359 518 ntBASIC0.3□□□□□ -2.36
AP3S1Q92572 AC011604.1-201ENST00000545978 196 ntBASIC0.3□□□□□ -2.36
AP3S1Q92572 AC009712.1-201ENST00000564938 316 ntBASIC0.3□□□□□ -2.36
AP3S1Q92572 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.3□□□□□ -2.36
AP3S1Q92572 AC008752.3-201ENST00000588113 712 ntBASIC0.3□□□□□ -2.36
AP3S1Q92572 RPL17P51-201ENST00000605218 238 ntBASIC0.3□□□□□ -2.36
AP3S1Q92572 MIR6516-201ENST00000630554 81 ntBASIC0.3□□□□□ -2.36
AP3S1Q92572 MIR338-201ENST00000636369 67 ntBASIC0.3□□□□□ -2.36
AP3S1Q92572 RNU6-769P-201ENST00000384407 104 ntBASIC0.29□□□□□ -2.36
AP3S1Q92572 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.29□□□□□ -2.36
AP3S1Q92572 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.29□□□□□ -2.36
AP3S1Q92572 MTND4P15-201ENST00000437913 1033 ntBASIC0.29□□□□□ -2.36
AP3S1Q92572 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.29□□□□□ -2.36
AP3S1Q92572 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.29□□□□□ -2.36
AP3S1Q92572 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.29□□□□□ -2.36
AP3S1Q92572 AC067942.3-201ENST00000512025 362 ntBASIC0.29□□□□□ -2.36
AP3S1Q92572 AC108729.3-201ENST00000513484 108 ntBASIC0.29□□□□□ -2.36
AP3S1Q92572 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.29□□□□□ -2.36
AP3S1Q92572 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.29□□□□□ -2.36
AP3S1Q92572 AL929325.1-201ENST00000603096 117 ntBASIC0.29□□□□□ -2.36
AP3S1Q92572 AC144521.1-201ENST00000607148 956 ntBASIC0.29□□□□□ -2.36
AP3S1Q92572 AC131235.4-201ENST00000609288 620 ntBASIC0.29□□□□□ -2.36
AP3S1Q92572 AC092106.3-201ENST00000611308 722 ntBASIC0.29□□□□□ -2.36
AP3S1Q92572 AC097372.5-201ENST00000623665 376 ntBASIC0.29□□□□□ -2.36
AP3S1Q92572 AC009541.1-201ENST00000438279 2662 ntBASIC0.29□□□□□ -2.36
AP3S1Q92572 RNU1-76P-201ENST00000362903 159 ntBASIC0.28□□□□□ -2.36
AP3S1Q92572 RNU1-93P-201ENST00000364704 169 ntBASIC0.28□□□□□ -2.36
AP3S1Q92572 RNU6-1335P-201ENST00000365426 107 ntBASIC0.28□□□□□ -2.36
AP3S1Q92572 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
AP3S1Q92572 AL031577.2-201ENST00000404133 280 ntBASIC0.28□□□□□ -2.36
AP3S1Q92572 RNU6-321P-201ENST00000410912 106 ntBASIC0.28□□□□□ -2.36
AP3S1Q92572 AL590135.1-201ENST00000422215 156 ntBASIC0.28□□□□□ -2.36
AP3S1Q92572 AC019205.3-201ENST00000424573 156 ntBASIC0.28□□□□□ -2.36
AP3S1Q92572 AL117351.1-201ENST00000438864 766 ntBASIC0.28□□□□□ -2.36
AP3S1Q92572 AL606662.1-201ENST00000445763 553 ntBASIC0.28□□□□□ -2.36
AP3S1Q92572 AC016700.2-201ENST00000446011 156 ntBASIC0.28□□□□□ -2.36
AP3S1Q92572 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.28□□□□□ -2.36
AP3S1Q92572 SRRM1P2-201ENST00000464531 1192 ntBASIC0.28□□□□□ -2.36
AP3S1Q92572 AC104982.1-201ENST00000478775 574 ntBASIC0.28□□□□□ -2.36
AP3S1Q92572 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
AP3S1Q92572 RPS26P48-201ENST00000491713 339 ntBASIC0.28□□□□□ -2.36
AP3S1Q92572 AC015911.1-201ENST00000495111 156 ntBASIC0.28□□□□□ -2.36
AP3S1Q92572 AC079395.1-201ENST00000510981 262 ntBASIC0.28□□□□□ -2.36
AP3S1Q92572 AC109445.1-201ENST00000512356 383 ntBASIC0.28□□□□□ -2.36
AP3S1Q92572 RNA5SP102-201ENST00000516865 106 ntBASIC0.28□□□□□ -2.36
AP3S1Q92572 MTND2P7-201ENST00000521337 640 ntBASIC0.28□□□□□ -2.36
AP3S1Q92572 ZNF321P-202ENST00000550843 495 ntBASIC0.28□□□□□ -2.36
AP3S1Q92572 MIR3923-201ENST00000579521 83 ntBASIC0.28□□□□□ -2.36
AP3S1Q92572 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.28□□□□□ -2.36
AP3S1Q92572 BCRP9-201ENST00000605312 388 ntBASIC0.28□□□□□ -2.36
AP3S1Q92572 AC006927.4-201ENST00000639187 543 ntBASIC0.28□□□□□ -2.36
AP3S1Q92572 RNA5SP499-201ENST00000363982 119 ntBASIC0.27□□□□□ -2.37
AP3S1Q92572 RNU6-505P-201ENST00000384427 107 ntBASIC0.27□□□□□ -2.37
AP3S1Q92572 RPL21P1-201ENST00000399532 476 ntBASIC0.27□□□□□ -2.37
AP3S1Q92572 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.27□□□□□ -2.37
AP3S1Q92572 AC002486.1-201ENST00000435098 391 ntBASIC0.27□□□□□ -2.37
AP3S1Q92572 RPEP5-201ENST00000441137 268 ntBASIC0.27□□□□□ -2.37
AP3S1Q92572 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.27□□□□□ -2.37
AP3S1Q92572 Z73417.1-201ENST00000447373 778 ntBASIC0.27□□□□□ -2.37
AP3S1Q92572 RNU7-90P-201ENST00000459216 62 ntBASIC0.27□□□□□ -2.37
AP3S1Q92572 RNU7-21P-201ENST00000459430 62 ntBASIC0.27□□□□□ -2.37
AP3S1Q92572 AL163973.1-201ENST00000484753 577 ntBASIC0.27□□□□□ -2.37
AP3S1Q92572 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
AP3S1Q92572 AP002453.2-201ENST00000533503 320 ntBASIC0.27□□□□□ -2.37
AP3S1Q92572 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.27□□□□□ -2.37
AP3S1Q92572 TPRKBP2-201ENST00000565969 475 ntBASIC0.27□□□□□ -2.37
AP3S1Q92572 MTND3P13-201ENST00000574391 343 ntBASIC0.27□□□□□ -2.37
AP3S1Q92572 AL606834.3-201ENST00000602615 496 ntBASIC0.27□□□□□ -2.37
AP3S1Q92572 AC016727.2-201ENST00000603988 621 ntBASIC0.27□□□□□ -2.37
AP3S1Q92572 RNU6-88P-201ENST00000606801 100 ntBASIC0.27□□□□□ -2.37
AP3S1Q92572 AC091965.4-201ENST00000607691 587 ntBASIC0.27□□□□□ -2.37
AP3S1Q92572 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.27□□□□□ -2.37
AP3S1Q92572 AC116165.2-201ENST00000616705 206 ntBASIC0.27□□□□□ -2.37
AP3S1Q92572 MIR5087-201ENST00000635826 76 ntBASIC0.27□□□□□ -2.37
AP3S1Q92572 CASC19-280ENST00000642102 1351 ntBASIC0.27□□□□□ -2.37
AP3S1Q92572 Y_RNA.192-201ENST00000363977 102 ntBASIC0.26□□□□□ -2.37
AP3S1Q92572 RNU6-1141P-201ENST00000364520 107 ntBASIC0.26□□□□□ -2.37
AP3S1Q92572 RNU6-1031P-201ENST00000384773 107 ntBASIC0.26□□□□□ -2.37
AP3S1Q92572 RNU6-1237P-201ENST00000384777 107 ntBASIC0.26□□□□□ -2.37
AP3S1Q92572 RPS20P2-201ENST00000402520 389 ntBASIC0.26□□□□□ -2.37
AP3S1Q92572 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.26□□□□□ -2.37
AP3S1Q92572 AC019070.1-201ENST00000415008 1024 ntBASIC0.26□□□□□ -2.37
AP3S1Q92572 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms