Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 ACA59.1-201ENST00000515966 143 ntBASIC2.59□□□□□ -1.99
BEST2Q8NFU1 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.59□□□□□ -1.99
BEST2Q8NFU1 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.59□□□□□ -1.99
BEST2Q8NFU1 FRG2DP-202ENST00000566967 323 ntBASIC2.59□□□□□ -1.99
BEST2Q8NFU1 AC078795.3-201ENST00000602913 472 ntBASIC2.59□□□□□ -1.99
BEST2Q8NFU1 AC073410.2-201ENST00000603240 332 ntBASIC2.59□□□□□ -1.99
BEST2Q8NFU1 C8orf59P2-201ENST00000603441 271 ntBASIC2.59□□□□□ -1.99
BEST2Q8NFU1 AC018462.2-201ENST00000605375 395 ntBASIC2.59□□□□□ -1.99
BEST2Q8NFU1 MIR8076-201ENST00000611401 83 ntBASIC2.59□□□□□ -1.99
BEST2Q8NFU1 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.59□□□□□ -1.99
BEST2Q8NFU1 AC007792.1-201ENST00000623023 402 ntBASIC2.59□□□□□ -1.99
BEST2Q8NFU1 AL359697.1-201ENST00000624879 587 ntBASIC2.59□□□□□ -1.99
BEST2Q8NFU1 AC009541.1-201ENST00000438279 2662 ntBASIC2.59□□□□□ -2
BEST2Q8NFU1 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.59□□□□□ -2
BEST2Q8NFU1 AC069528.2-201ENST00000624849 1991 ntBASIC2.58□□□□□ -2
BEST2Q8NFU1 Y_RNA.40-201ENST00000362645 93 ntBASIC2.58□□□□□ -2
BEST2Q8NFU1 SNORD32A-201ENST00000364805 84 ntBASIC2.58□□□□□ -2
BEST2Q8NFU1 MIR218-1-201ENST00000384999 110 ntBASIC2.58□□□□□ -2
BEST2Q8NFU1 RNU6-1050P-201ENST00000410388 107 ntBASIC2.58□□□□□ -2
BEST2Q8NFU1 RNU2-25P-201ENST00000411041 191 ntBASIC2.58□□□□□ -2
BEST2Q8NFU1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.58□□□□□ -2
BEST2Q8NFU1 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.58□□□□□ -2
BEST2Q8NFU1 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.58□□□□□ -2
BEST2Q8NFU1 COX6CP5-201ENST00000527162 228 ntBASIC2.58□□□□□ -2
BEST2Q8NFU1 AC109446.1-201ENST00000566172 220 ntBASIC2.58□□□□□ -2
BEST2Q8NFU1 MIR4446-201ENST00000578505 67 ntBASIC2.58□□□□□ -2
BEST2Q8NFU1 AC103810.1-201ENST00000579873 453 ntBASIC2.58□□□□□ -2
BEST2Q8NFU1 MIR3199-1-201ENST00000582434 88 ntBASIC2.58□□□□□ -2
BEST2Q8NFU1 AC009229.3-201ENST00000608056 282 ntBASIC2.58□□□□□ -2
BEST2Q8NFU1 MTND4LP32-201ENST00000636111 270 ntBASIC2.58□□□□□ -2
BEST2Q8NFU1 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.58□□□□□ -2
BEST2Q8NFU1 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.58□□□□□ -2
BEST2Q8NFU1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.57□□□□□ -2
BEST2Q8NFU1 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
BEST2Q8NFU1 RNU6-797P-201ENST00000363101 109 ntBASIC2.57□□□□□ -2
BEST2Q8NFU1 RNU6-1297P-201ENST00000384415 104 ntBASIC2.57□□□□□ -2
BEST2Q8NFU1 MTND3P23-201ENST00000431980 347 ntBASIC2.57□□□□□ -2
BEST2Q8NFU1 RPS15AP7-201ENST00000439294 405 ntBASIC2.57□□□□□ -2
BEST2Q8NFU1 SNORD5.1-201ENST00000458800 75 ntBASIC2.57□□□□□ -2
BEST2Q8NFU1 Y_RNA.632-201ENST00000459189 102 ntBASIC2.57□□□□□ -2
BEST2Q8NFU1 FO393415.2-201ENST00000480085 343 ntBASIC2.57□□□□□ -2
BEST2Q8NFU1 RPL23AP70-201ENST00000483361 460 ntBASIC2.57□□□□□ -2
BEST2Q8NFU1 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.57□□□□□ -2
BEST2Q8NFU1 Y_RNA.670-201ENST00000516255 105 ntBASIC2.57□□□□□ -2
BEST2Q8NFU1 Y_RNA.708-201ENST00000516950 96 ntBASIC2.57□□□□□ -2
BEST2Q8NFU1 RNU6-1213P-201ENST00000517075 94 ntBASIC2.57□□□□□ -2
BEST2Q8NFU1 HSPE1P4-201ENST00000550617 308 ntBASIC2.57□□□□□ -2
BEST2Q8NFU1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.57□□□□□ -2
BEST2Q8NFU1 AC011494.1-201ENST00000596454 237 ntBASIC2.57□□□□□ -2
BEST2Q8NFU1 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.57□□□□□ -2
BEST2Q8NFU1 AC080128.1-201ENST00000474389 1917 ntBASIC2.57□□□□□ -2
BEST2Q8NFU1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
BEST2Q8NFU1 KPNA2P1-201ENST00000458289 1591 ntBASIC2.57□□□□□ -2
BEST2Q8NFU1 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
BEST2Q8NFU1 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
BEST2Q8NFU1 ZNF271P-202ENST00000465539 1970 ntBASIC2.56□□□□□ -2
BEST2Q8NFU1 AC010329.5-201ENST00000623497 2174 ntBASIC2.56□□□□□ -2
BEST2Q8NFU1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.56□□□□□ -2
BEST2Q8NFU1 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.56□□□□□ -2
BEST2Q8NFU1 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
BEST2Q8NFU1 OR56A5-201ENST00000340110 738 ntBASIC2.56□□□□□ -2
BEST2Q8NFU1 RNU6-486P-201ENST00000363116 107 ntBASIC2.56□□□□□ -2
BEST2Q8NFU1 SNORD114-30-201ENST00000364448 72 ntBASIC2.56□□□□□ -2
BEST2Q8NFU1 RNU6-1141P-201ENST00000364520 107 ntBASIC2.56□□□□□ -2
BEST2Q8NFU1 RNU6-842P-201ENST00000384269 107 ntBASIC2.56□□□□□ -2
BEST2Q8NFU1 Y_RNA.504-201ENST00000384481 104 ntBASIC2.56□□□□□ -2
BEST2Q8NFU1 RNU1-57P-201ENST00000384491 166 ntBASIC2.56□□□□□ -2
BEST2Q8NFU1 MIR186-201ENST00000384988 86 ntBASIC2.56□□□□□ -2
BEST2Q8NFU1 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.56□□□□□ -2
BEST2Q8NFU1 RPL30P4-201ENST00000429309 333 ntBASIC2.56□□□□□ -2
BEST2Q8NFU1 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.56□□□□□ -2
BEST2Q8NFU1 RPL7P42-201ENST00000481005 679 ntBASIC2.56□□□□□ -2
BEST2Q8NFU1 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.56□□□□□ -2
BEST2Q8NFU1 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.56□□□□□ -2
BEST2Q8NFU1 APOOP3-201ENST00000536787 586 ntBASIC2.56□□□□□ -2
BEST2Q8NFU1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.56□□□□□ -2
BEST2Q8NFU1 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.56□□□□□ -2
BEST2Q8NFU1 AP000654.2-201ENST00000605633 586 ntBASIC2.56□□□□□ -2
BEST2Q8NFU1 AC067747.1-201ENST00000608026 250 ntBASIC2.56□□□□□ -2
BEST2Q8NFU1 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.56□□□□□ -2
BEST2Q8NFU1 AC046143.2-201ENST00000609789 160 ntBASIC2.56□□□□□ -2
BEST2Q8NFU1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.56□□□□□ -2
BEST2Q8NFU1 PISRT1.1-201ENST00000616930 107 ntBASIC2.56□□□□□ -2
BEST2Q8NFU1 AL159153.1-201ENST00000619688 317 ntBASIC2.56□□□□□ -2
BEST2Q8NFU1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.56□□□□□ -2
BEST2Q8NFU1 AL669831.3-213ENST00000636676 183 ntBASIC2.56□□□□□ -2
BEST2Q8NFU1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.56□□□□□ -2
BEST2Q8NFU1 Y_RNA.2-201ENST00000362330 96 ntBASIC2.55□□□□□ -2
BEST2Q8NFU1 Y_RNA.61-201ENST00000362835 102 ntBASIC2.55□□□□□ -2
BEST2Q8NFU1 Y_RNA.404-201ENST00000383978 102 ntBASIC2.55□□□□□ -2
BEST2Q8NFU1 SNORA75.4-201ENST00000391278 119 ntBASIC2.55□□□□□ -2
BEST2Q8NFU1 RNA5SP181-201ENST00000410246 98 ntBASIC2.55□□□□□ -2
BEST2Q8NFU1 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.55□□□□□ -2
BEST2Q8NFU1 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.55□□□□□ -2
BEST2Q8NFU1 BX276092.3-201ENST00000424182 230 ntBASIC2.55□□□□□ -2
BEST2Q8NFU1 AC008267.5-201ENST00000424928 265 ntBASIC2.55□□□□□ -2
BEST2Q8NFU1 RPL23AP95-201ENST00000426806 265 ntBASIC2.55□□□□□ -2
BEST2Q8NFU1 CR769767.1-201ENST00000436337 346 ntBASIC2.55□□□□□ -2
BEST2Q8NFU1 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.55□□□□□ -2
BEST2Q8NFU1 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms