Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 MIR3162-201ENST00000581818 82 ntBASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 AC091135.1-201ENST00000585943 307 ntBASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 AC092794.1-201ENST00000612734 582 ntBASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 U6atac.1-201ENST00000616025 117 ntBASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 AL159153.1-201ENST00000619688 317 ntBASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
CCDC71LQ8N9Z2 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.71□□□□□ -2.13
CCDC71LQ8N9Z2 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
CCDC71LQ8N9Z2 SNORD113-7-201ENST00000363762 77 ntBASIC1.71□□□□□ -2.14
CCDC71LQ8N9Z2 SNORA32.2-201ENST00000384049 122 ntBASIC1.71□□□□□ -2.14
CCDC71LQ8N9Z2 VN1R36P-201ENST00000414936 291 ntBASIC1.71□□□□□ -2.14
CCDC71LQ8N9Z2 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.71□□□□□ -2.14
CCDC71LQ8N9Z2 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC71LQ8N9Z2 AC025750.2-201ENST00000442609 450 ntBASIC1.71□□□□□ -2.14
CCDC71LQ8N9Z2 RPL23AP6-201ENST00000446637 472 ntBASIC1.71□□□□□ -2.14
CCDC71LQ8N9Z2 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC71LQ8N9Z2 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.71□□□□□ -2.14
CCDC71LQ8N9Z2 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC71LQ8N9Z2 AMD1P1-201ENST00000457220 922 ntBASIC1.71□□□□□ -2.14
CCDC71LQ8N9Z2 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC71LQ8N9Z2 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.71□□□□□ -2.14
CCDC71LQ8N9Z2 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.71□□□□□ -2.14
CCDC71LQ8N9Z2 AP003033.1-201ENST00000527244 415 ntBASIC1.71□□□□□ -2.14
CCDC71LQ8N9Z2 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.71□□□□□ -2.14
CCDC71LQ8N9Z2 HSPE1P4-201ENST00000550617 308 ntBASIC1.71□□□□□ -2.14
CCDC71LQ8N9Z2 AC026371.1-201ENST00000551867 419 ntBASIC1.71□□□□□ -2.14
CCDC71LQ8N9Z2 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.71□□□□□ -2.14
CCDC71LQ8N9Z2 MIR4299-201ENST00000577899 72 ntBASIC1.71□□□□□ -2.14
CCDC71LQ8N9Z2 AC002553.4-201ENST00000616896 331 ntBASIC1.71□□□□□ -2.14
CCDC71LQ8N9Z2 MIR6852-201ENST00000621699 66 ntBASIC1.71□□□□□ -2.14
CCDC71LQ8N9Z2 AC005858.4-201ENST00000623191 700 ntBASIC1.71□□□□□ -2.14
CCDC71LQ8N9Z2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.71□□□□□ -2.14
CCDC71LQ8N9Z2 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 RNA5SP276-201ENST00000362580 94 ntBASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 U3.12-201ENST00000364498 214 ntBASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 RNU6-1317P-201ENST00000364582 104 ntBASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 RNU6-546P-201ENST00000383991 107 ntBASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 Y_RNA.530-201ENST00000384587 101 ntBASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 SNORA11.4-201ENST00000408823 129 ntBASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 Y_RNA.597-201ENST00000410463 100 ntBASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 RNA5SP489-201ENST00000410986 109 ntBASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 RPL31P63-201ENST00000422565 375 ntBASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 SNAP23P1-201ENST00000433229 246 ntBASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 AC244670.1-201ENST00000436879 112 ntBASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 snoU13.14-201ENST00000459372 104 ntBASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 RPL9P9-202ENST00000466501 579 ntBASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 RPS29P25-201ENST00000481709 171 ntBASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 RN7SL274P-201ENST00000492268 272 ntBASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 AC069439.1-201ENST00000494739 167 ntBASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 FAM206BP-201ENST00000510179 541 ntBASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 RNU5F-2P-201ENST00000516066 82 ntBASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 RNU6-273P-201ENST00000516937 96 ntBASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 TRAV32-201ENST00000553993 340 ntBASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 AC243960.4-201ENST00000600532 288 ntBASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 VN1R107P-201ENST00000601784 209 ntBASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 AC068944.2-201ENST00000610373 403 ntBASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 FAM157A-202ENST00000615155 405 ntBASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CCDC71LQ8N9Z2 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 Y_RNA.100-201ENST00000363141 102 ntBASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 RNU6-1285P-201ENST00000363480 105 ntBASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 RNU6-1141P-201ENST00000364520 107 ntBASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 Y_RNA.504-201ENST00000384481 104 ntBASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 SUMO2P12-201ENST00000405924 140 ntBASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 RNA5SP118-201ENST00000410385 109 ntBASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 RNU2-48P-201ENST00000410694 191 ntBASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 AC009161.1-201ENST00000417306 376 ntBASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 MTND3P9-201ENST00000429526 346 ntBASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 AL139415.2-201ENST00000431968 163 ntBASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 MTATP6P13-201ENST00000438531 667 ntBASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 RPL23AP3-201ENST00000453844 468 ntBASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 AC091874.1-201ENST00000511402 339 ntBASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 MIR449C-201ENST00000516047 92 ntBASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 RNU6-256P-201ENST00000516747 97 ntBASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 RNU6-612P-201ENST00000516909 102 ntBASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 AC115990.1-201ENST00000526957 301 ntBASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 SNRPGP18-201ENST00000553000 214 ntBASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 AC007375.1-201ENST00000554513 578 ntBASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 AP003465.2-201ENST00000602571 373 ntBASIC1.69□□□□□ -2.14
CCDC71LQ8N9Z2 AP001836.1-201ENST00000604675 523 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms