Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.78□□□□□ -1.96
HERC6Q8IVU3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
HERC6Q8IVU3 AP006437.1-201ENST00000641440 3685 ntBASIC2.78□□□□□ -1.97
HERC6Q8IVU3 AC135776.4-201ENST00000624300 1904 ntBASIC2.78□□□□□ -1.97
HERC6Q8IVU3 Y_RNA.263-201ENST00000364659 114 ntBASIC2.77□□□□□ -1.97
HERC6Q8IVU3 Y_RNA.529-201ENST00000384586 119 ntBASIC2.77□□□□□ -1.97
HERC6Q8IVU3 MIR29B2-201ENST00000385055 81 ntBASIC2.77□□□□□ -1.97
HERC6Q8IVU3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
HERC6Q8IVU3 MIR764-201ENST00000390811 85 ntBASIC2.77□□□□□ -1.97
HERC6Q8IVU3 AC074085.1-201ENST00000413598 418 ntBASIC2.77□□□□□ -1.97
HERC6Q8IVU3 MTND3P9-201ENST00000429526 346 ntBASIC2.77□□□□□ -1.97
HERC6Q8IVU3 AL591806.2-201ENST00000433122 173 ntBASIC2.77□□□□□ -1.97
HERC6Q8IVU3 DAP3P1-201ENST00000441522 278 ntBASIC2.77□□□□□ -1.97
HERC6Q8IVU3 AL161788.1-201ENST00000441805 169 ntBASIC2.77□□□□□ -1.97
HERC6Q8IVU3 AL031659.1-201ENST00000447075 539 ntBASIC2.77□□□□□ -1.97
HERC6Q8IVU3 AC107399.1-201ENST00000451226 265 ntBASIC2.77□□□□□ -1.97
HERC6Q8IVU3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.77□□□□□ -1.97
HERC6Q8IVU3 RN7SL636P-201ENST00000497504 294 ntBASIC2.77□□□□□ -1.97
HERC6Q8IVU3 AC103851.1-201ENST00000506833 274 ntBASIC2.77□□□□□ -1.97
HERC6Q8IVU3 Y_RNA.682-201ENST00000516457 100 ntBASIC2.77□□□□□ -1.97
HERC6Q8IVU3 RNU6-567P-201ENST00000516746 107 ntBASIC2.77□□□□□ -1.97
HERC6Q8IVU3 RNU6-1088P-201ENST00000516850 104 ntBASIC2.77□□□□□ -1.97
HERC6Q8IVU3 RPS3AP23-202ENST00000574601 686 ntBASIC2.77□□□□□ -1.97
HERC6Q8IVU3 AL133215.3-201ENST00000609801 448 ntBASIC2.77□□□□□ -1.97
HERC6Q8IVU3 AC112487.2-201ENST00000637950 304 ntBASIC2.77□□□□□ -1.97
HERC6Q8IVU3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HERC6Q8IVU3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.77□□□□□ -1.97
HERC6Q8IVU3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HERC6Q8IVU3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.76□□□□□ -1.97
HERC6Q8IVU3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
HERC6Q8IVU3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.76□□□□□ -1.97
HERC6Q8IVU3 RNU6-797P-201ENST00000363101 109 ntBASIC2.76□□□□□ -1.97
HERC6Q8IVU3 Y_RNA.184-201ENST00000363884 108 ntBASIC2.76□□□□□ -1.97
HERC6Q8IVU3 SNORD32A-201ENST00000364805 84 ntBASIC2.76□□□□□ -1.97
HERC6Q8IVU3 AL590632.1-201ENST00000424289 371 ntBASIC2.76□□□□□ -1.97
HERC6Q8IVU3 AIMP1P2-201ENST00000425294 312 ntBASIC2.76□□□□□ -1.97
HERC6Q8IVU3 RPL23AP95-201ENST00000426806 265 ntBASIC2.76□□□□□ -1.97
HERC6Q8IVU3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.76□□□□□ -1.97
HERC6Q8IVU3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.76□□□□□ -1.97
HERC6Q8IVU3 GPM6BP3-201ENST00000442797 145 ntBASIC2.76□□□□□ -1.97
HERC6Q8IVU3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.76□□□□□ -1.97
HERC6Q8IVU3 MRPL50P4-201ENST00000446432 475 ntBASIC2.76□□□□□ -1.97
HERC6Q8IVU3 RNU7-187P-201ENST00000458985 68 ntBASIC2.76□□□□□ -1.97
HERC6Q8IVU3 AC103975.1-201ENST00000482506 483 ntBASIC2.76□□□□□ -1.97
HERC6Q8IVU3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.76□□□□□ -1.97
HERC6Q8IVU3 RNU6-826P-201ENST00000516827 104 ntBASIC2.76□□□□□ -1.97
HERC6Q8IVU3 RNU6-586P-201ENST00000517265 104 ntBASIC2.76□□□□□ -1.97
HERC6Q8IVU3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.76□□□□□ -1.97
HERC6Q8IVU3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.76□□□□□ -1.97
HERC6Q8IVU3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.76□□□□□ -1.97
HERC6Q8IVU3 AC016256.1-201ENST00000547971 354 ntBASIC2.76□□□□□ -1.97
HERC6Q8IVU3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
HERC6Q8IVU3 AC021231.3-201ENST00000558497 370 ntBASIC2.76□□□□□ -1.97
HERC6Q8IVU3 AL355297.2-201ENST00000604792 129 ntBASIC2.76□□□□□ -1.97
HERC6Q8IVU3 AL138963.2-201ENST00000605137 226 ntBASIC2.76□□□□□ -1.97
HERC6Q8IVU3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HERC6Q8IVU3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
HERC6Q8IVU3 AC104237.2-201ENST00000612456 443 ntBASIC2.76□□□□□ -1.97
HERC6Q8IVU3 AC090517.3-201ENST00000625170 141 ntBASIC2.76□□□□□ -1.97
HERC6Q8IVU3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.76□□□□□ -1.97
HERC6Q8IVU3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.75□□□□□ -1.97
HERC6Q8IVU3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.75□□□□□ -1.97
HERC6Q8IVU3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.75□□□□□ -1.97
HERC6Q8IVU3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HERC6Q8IVU3 Y_RNA.151-201ENST00000363566 112 ntBASIC2.75□□□□□ -1.97
HERC6Q8IVU3 Y_RNA.504-201ENST00000384481 104 ntBASIC2.75□□□□□ -1.97
HERC6Q8IVU3 MIR517A-201ENST00000385001 87 ntBASIC2.75□□□□□ -1.97
HERC6Q8IVU3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
HERC6Q8IVU3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HERC6Q8IVU3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.75□□□□□ -1.97
HERC6Q8IVU3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.75□□□□□ -1.97
HERC6Q8IVU3 AL590135.1-201ENST00000422215 156 ntBASIC2.75□□□□□ -1.97
HERC6Q8IVU3 AC019205.3-201ENST00000424573 156 ntBASIC2.75□□□□□ -1.97
HERC6Q8IVU3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.75□□□□□ -1.97
HERC6Q8IVU3 AL356320.1-201ENST00000429616 163 ntBASIC2.75□□□□□ -1.97
HERC6Q8IVU3 AC016700.2-201ENST00000446011 156 ntBASIC2.75□□□□□ -1.97
HERC6Q8IVU3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.75□□□□□ -1.97
HERC6Q8IVU3 AC008571.1-201ENST00000467232 300 ntBASIC2.75□□□□□ -1.97
HERC6Q8IVU3 AC015911.1-201ENST00000495111 156 ntBASIC2.75□□□□□ -1.97
HERC6Q8IVU3 RPS27P27-201ENST00000498779 255 ntBASIC2.75□□□□□ -1.97
HERC6Q8IVU3 AC108210.2-201ENST00000503681 201 ntBASIC2.75□□□□□ -1.97
HERC6Q8IVU3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.75□□□□□ -1.97
HERC6Q8IVU3 RNU5F-2P-201ENST00000516066 82 ntBASIC2.75□□□□□ -1.97
HERC6Q8IVU3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.75□□□□□ -1.97
HERC6Q8IVU3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.75□□□□□ -1.97
HERC6Q8IVU3 AC078795.3-201ENST00000602913 472 ntBASIC2.75□□□□□ -1.97
HERC6Q8IVU3 AC025754.2-201ENST00000606491 432 ntBASIC2.75□□□□□ -1.97
HERC6Q8IVU3 AL161423.1-201ENST00000613700 262 ntBASIC2.75□□□□□ -1.97
HERC6Q8IVU3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.75□□□□□ -1.97
HERC6Q8IVU3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.75□□□□□ -1.97
HERC6Q8IVU3 AL359314.1-201ENST00000616913 261 ntBASIC2.75□□□□□ -1.97
HERC6Q8IVU3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HERC6Q8IVU3 SNORD98-201ENST00000636377 67 ntBASIC2.75□□□□□ -1.97
HERC6Q8IVU3 AC099654.5-201ENST00000636479 350 ntBASIC2.75□□□□□ -1.97
HERC6Q8IVU3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.75□□□□□ -1.97
HERC6Q8IVU3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HERC6Q8IVU3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.75□□□□□ -1.97
HERC6Q8IVU3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
HERC6Q8IVU3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
HERC6Q8IVU3 Y_RNA.40-201ENST00000362645 93 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms