Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
RNF135Q8IUD6 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNF135Q8IUD6 RNA5SP502-201ENST00000362694 119 ntBASIC4.48□□□□□ -1.69
RNF135Q8IUD6 Y_RNA.172-201ENST00000363765 102 ntBASIC4.48□□□□□ -1.69
RNF135Q8IUD6 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
RNF135Q8IUD6 RNU6-476P-201ENST00000384726 107 ntBASIC4.48□□□□□ -1.69
RNF135Q8IUD6 RNU6-376P-201ENST00000384731 106 ntBASIC4.48□□□□□ -1.69
RNF135Q8IUD6 RNU6-578P-201ENST00000390980 103 ntBASIC4.48□□□□□ -1.69
RNF135Q8IUD6 RNA5SP201-201ENST00000410316 124 ntBASIC4.48□□□□□ -1.69
RNF135Q8IUD6 U8.19-201ENST00000459095 133 ntBASIC4.48□□□□□ -1.69
RNF135Q8IUD6 RPL31P41-201ENST00000477967 372 ntBASIC4.48□□□□□ -1.69
RNF135Q8IUD6 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF135Q8IUD6 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.48□□□□□ -1.69
RNF135Q8IUD6 AC027176.1-201ENST00000560204 514 ntBASIC4.48□□□□□ -1.69
RNF135Q8IUD6 SNORD11B-201ENST00000607707 90 ntBASIC4.48□□□□□ -1.69
RNF135Q8IUD6 AC011603.4-201ENST00000611325 277 ntBASIC4.48□□□□□ -1.69
RNF135Q8IUD6 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF135Q8IUD6 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.48□□□□□ -1.69
RNF135Q8IUD6 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNF135Q8IUD6 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
RNF135Q8IUD6 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF135Q8IUD6 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF135Q8IUD6 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF135Q8IUD6 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
RNF135Q8IUD6 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF135Q8IUD6 Y_RNA.40-201ENST00000362645 93 ntBASIC4.47□□□□□ -1.69
RNF135Q8IUD6 RNU6-1010P-201ENST00000362757 107 ntBASIC4.47□□□□□ -1.69
RNF135Q8IUD6 RNU1-14P-201ENST00000362759 152 ntBASIC4.47□□□□□ -1.69
RNF135Q8IUD6 RNU6-529P-201ENST00000363383 104 ntBASIC4.47□□□□□ -1.69
RNF135Q8IUD6 RNU2-49P-201ENST00000410666 184 ntBASIC4.47□□□□□ -1.69
RNF135Q8IUD6 AL441985.1-201ENST00000457727 251 ntBASIC4.47□□□□□ -1.69
RNF135Q8IUD6 RAC1P5-201ENST00000512182 576 ntBASIC4.47□□□□□ -1.69
RNF135Q8IUD6 RN7SKP164-201ENST00000516138 266 ntBASIC4.47□□□□□ -1.69
RNF135Q8IUD6 RNU6-344P-201ENST00000516635 111 ntBASIC4.47□□□□□ -1.69
RNF135Q8IUD6 Y_RNA.709-201ENST00000516952 92 ntBASIC4.47□□□□□ -1.69
RNF135Q8IUD6 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.47□□□□□ -1.69
RNF135Q8IUD6 MIR4744-201ENST00000581563 82 ntBASIC4.47□□□□□ -1.69
RNF135Q8IUD6 FAM27D1-201ENST00000612308 341 ntBASIC4.47□□□□□ -1.69
RNF135Q8IUD6 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
RNF135Q8IUD6 AC005562.2-201ENST00000618264 111 ntBASIC4.47□□□□□ -1.69
RNF135Q8IUD6 AC018692.3-201ENST00000623929 123 ntBASIC4.47□□□□□ -1.69
RNF135Q8IUD6 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF135Q8IUD6 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.47□□□□□ -1.69
RNF135Q8IUD6 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
RNF135Q8IUD6 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
RNF135Q8IUD6 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.46□□□□□ -1.7
RNF135Q8IUD6 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNF135Q8IUD6 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNF135Q8IUD6 Y_RNA.111-201ENST00000363248 100 ntBASIC4.46□□□□□ -1.7
RNF135Q8IUD6 RNU6-755P-201ENST00000364400 103 ntBASIC4.46□□□□□ -1.7
RNF135Q8IUD6 AC245291.1-201ENST00000419501 328 ntBASIC4.46□□□□□ -1.7
RNF135Q8IUD6 AL157831.1-201ENST00000426134 473 ntBASIC4.46□□□□□ -1.7
RNF135Q8IUD6 RNU7-197P-201ENST00000458836 62 ntBASIC4.46□□□□□ -1.7
RNF135Q8IUD6 snoU13.14-201ENST00000459372 104 ntBASIC4.46□□□□□ -1.7
RNF135Q8IUD6 RPL35AP15-201ENST00000468042 339 ntBASIC4.46□□□□□ -1.7
RNF135Q8IUD6 RPL32P34-201ENST00000486380 400 ntBASIC4.46□□□□□ -1.7
RNF135Q8IUD6 RNA5SP309-201ENST00000516670 106 ntBASIC4.46□□□□□ -1.7
RNF135Q8IUD6 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RNF135Q8IUD6 TCL6_2.1-201ENST00000615162 119 ntBASIC4.46□□□□□ -1.7
RNF135Q8IUD6 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RNF135Q8IUD6 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.46□□□□□ -1.7
RNF135Q8IUD6 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.46□□□□□ -1.7
RNF135Q8IUD6 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNF135Q8IUD6 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
RNF135Q8IUD6 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
RNF135Q8IUD6 RNU6-801P-201ENST00000364087 105 ntBASIC4.45□□□□□ -1.7
RNF135Q8IUD6 RNU1-44P-201ENST00000384453 163 ntBASIC4.45□□□□□ -1.7
RNF135Q8IUD6 MIR634-201ENST00000385208 97 ntBASIC4.45□□□□□ -1.7
RNF135Q8IUD6 MIR147B-201ENST00000390185 80 ntBASIC4.45□□□□□ -1.7
RNF135Q8IUD6 RNA5SP146-201ENST00000410743 123 ntBASIC4.45□□□□□ -1.7
RNF135Q8IUD6 AC004866.1-201ENST00000411748 78 ntBASIC4.45□□□□□ -1.7
RNF135Q8IUD6 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF135Q8IUD6 AL714022.1-201ENST00000439897 151 ntBASIC4.45□□□□□ -1.7
RNF135Q8IUD6 AC004386.2-201ENST00000441858 148 ntBASIC4.45□□□□□ -1.7
RNF135Q8IUD6 AL357134.1-201ENST00000445848 426 ntBASIC4.45□□□□□ -1.7
RNF135Q8IUD6 RN7SL812P-201ENST00000493791 279 ntBASIC4.45□□□□□ -1.7
RNF135Q8IUD6 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF135Q8IUD6 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF135Q8IUD6 AC136628.3-201ENST00000521868 290 ntBASIC4.45□□□□□ -1.7
RNF135Q8IUD6 EIF4A1P12-201ENST00000551910 141 ntBASIC4.45□□□□□ -1.7
RNF135Q8IUD6 AC069294.1-201ENST00000608397 350 ntBASIC4.45□□□□□ -1.7
RNF135Q8IUD6 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.45□□□□□ -1.7
RNF135Q8IUD6 AC007546.2-201ENST00000623996 360 ntBASIC4.45□□□□□ -1.7
RNF135Q8IUD6 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF135Q8IUD6 AC016588.2-201ENST00000632484 3021 ntBASIC4.45□□□□□ -1.7
RNF135Q8IUD6 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF135Q8IUD6 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.44□□□□□ -1.7
RNF135Q8IUD6 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.44□□□□□ -1.7
RNF135Q8IUD6 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF135Q8IUD6 AC073346.2-201ENST00000624724 2058 ntBASIC4.44□□□□□ -1.7
RNF135Q8IUD6 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.44□□□□□ -1.7
RNF135Q8IUD6 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF135Q8IUD6 RNU6-103P-201ENST00000363686 107 ntBASIC4.44□□□□□ -1.7
RNF135Q8IUD6 SNORD87-201ENST00000364849 89 ntBASIC4.44□□□□□ -1.7
RNF135Q8IUD6 RNU6-1144P-201ENST00000384247 104 ntBASIC4.44□□□□□ -1.7
RNF135Q8IUD6 RNU6-198P-201ENST00000384258 104 ntBASIC4.44□□□□□ -1.7
RNF135Q8IUD6 MIR34B-201ENST00000385076 84 ntBASIC4.44□□□□□ -1.7
RNF135Q8IUD6 AIMP1P2-201ENST00000425294 312 ntBASIC4.44□□□□□ -1.7
RNF135Q8IUD6 AC027124.2-201ENST00000428249 105 ntBASIC4.44□□□□□ -1.7
RNF135Q8IUD6 AC069285.2-201ENST00000440210 275 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms