Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AL353778.1-201ENST00000603149 408 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 AC025449.1-201ENST00000603896 529 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 AC008759.3-201ENST00000613300 508 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 AC009032.1-201ENST00000617574 431 ntBASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.07□□□□□ -2.42
CSPG4Q6UVK1 SNORA63D-201ENST00000364359 132 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 MTND1P21-201ENST00000412991 285 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 MTCYBP38-201ENST00000417160 1123 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 MTND2P21-201ENST00000436242 1042 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 UTP23-205ENST00000520733 369 ntTSL 3 BASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 AL356057.1-201ENST00000533798 831 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 AL390208.1-201ENST00000605885 644 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 AC097065.2-201ENST00000608159 533 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 AC084824.4-201ENST00000620106 731 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 AC092634.7-201ENST00000621022 103 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 AC011155.2-201ENST00000623202 216 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 U6.99-201ENST00000637524 83 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 MIRLET7D-201ENST00000362263 87 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 SNORD114-5-201ENST00000362928 70 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 RNU6-1167P-201ENST00000363227 94 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 RNU6-819P-201ENST00000364116 107 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 CALM2P3-201ENST00000400429 449 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 RAC1P6-201ENST00000423911 575 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 AC244098.3-201ENST00000424803 96 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 MTCO2P12-201ENST00000427426 682 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 AC092001.1-201ENST00000453012 261 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 SNORD126-201ENST00000459475 77 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 RPL39P38-201ENST00000467018 153 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 RNU6-927P-201ENST00000516199 100 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 SNORA31.19-201ENST00000517079 126 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 AL157871.3-201ENST00000557231 293 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 AC060771.1-201ENST00000582031 164 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 RAC1P9-201ENST00000604990 392 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 AC021506.2-201ENST00000612354 169 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 AL163051.2-201ENST00000618976 735 ntBASIC-0.08□□□□□ -2.42
CSPG4Q6UVK1 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.09□□□□□ -2.42
CSPG4Q6UVK1 MIR520F-201ENST00000384824 87 ntBASIC-0.09□□□□□ -2.42
CSPG4Q6UVK1 AF228730.1-201ENST00000397972 663 ntBASIC-0.09□□□□□ -2.42
CSPG4Q6UVK1 AL133264.1-201ENST00000407157 562 ntBASIC-0.09□□□□□ -2.42
CSPG4Q6UVK1 RNA5SP111-201ENST00000411386 101 ntBASIC-0.09□□□□□ -2.42
CSPG4Q6UVK1 RPL23AP50-201ENST00000434149 455 ntBASIC-0.09□□□□□ -2.42
CSPG4Q6UVK1 AC020550.1-201ENST00000447385 163 ntBASIC-0.09□□□□□ -2.42
CSPG4Q6UVK1 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.09□□□□□ -2.42
CSPG4Q6UVK1 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
CSPG4Q6UVK1 BNIP3P6-201ENST00000549284 499 ntBASIC-0.09□□□□□ -2.42
CSPG4Q6UVK1 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC-0.09□□□□□ -2.42
CSPG4Q6UVK1 SUMO2P14-201ENST00000604488 293 ntBASIC-0.09□□□□□ -2.42
CSPG4Q6UVK1 AC034229.4-201ENST00000607861 441 ntBASIC-0.09□□□□□ -2.42
CSPG4Q6UVK1 AC116165.2-201ENST00000616705 206 ntBASIC-0.09□□□□□ -2.42
CSPG4Q6UVK1 RNU6V-201ENST00000384105 107 ntBASIC-0.09□□□□□ -2.42
CSPG4Q6UVK1 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-0.09□□□□□ -2.42
CSPG4Q6UVK1 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.09□□□□□ -2.42
CSPG4Q6UVK1 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.09□□□□□ -2.42
CSPG4Q6UVK1 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.09□□□□□ -2.42
CSPG4Q6UVK1 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.09□□□□□ -2.42
CSPG4Q6UVK1 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.09□□□□□ -2.42
CSPG4Q6UVK1 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.09□□□□□ -2.42
CSPG4Q6UVK1 MIR4431-201ENST00000579990 94 ntBASIC-0.09□□□□□ -2.42
CSPG4Q6UVK1 AL360219.1-201ENST00000610230 366 ntBASIC-0.09□□□□□ -2.42
CSPG4Q6UVK1 AC078938.1-201ENST00000620993 318 ntBASIC-0.09□□□□□ -2.42
CSPG4Q6UVK1 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC-0.09□□□□□ -2.42
CSPG4Q6UVK1 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.09□□□□□ -2.42
CSPG4Q6UVK1 MTND5P16-201ENST00000460269 1703 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 AC131280.1-202ENST00000624067 4211 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 RNU4-79P-201ENST00000362764 141 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 RNU4-32P-201ENST00000363404 141 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 SNORD116-20-201ENST00000384529 92 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 RPS15AP10-201ENST00000432472 382 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 RPS27AP8-201ENST00000452665 445 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 BTF3P15-201ENST00000455606 336 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 RNU7-21P-201ENST00000459430 62 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 HMGB1P29-201ENST00000505659 499 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 AC116655.1-201ENST00000508324 901 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 AC106038.2-201ENST00000520706 568 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 AC016256.1-201ENST00000547971 354 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 AC090888.2-201ENST00000559765 1144 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 AL132657.2-201ENST00000564417 358 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 AL353765.1-201ENST00000605514 183 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 AC009268.2-201ENST00000621925 457 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 AL078595.3-201ENST00000623815 1166 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 MIR103A2-201ENST00000362154 78 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 MIR365A-201ENST00000362260 87 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 AC011233.1-201ENST00000422812 283 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 AC010153.1-201ENST00000432862 727 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 MTND1P28-201ENST00000435623 950 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 AC092170.1-201ENST00000440211 356 ntBASIC-0.1□□□□□ -2.43
CSPG4Q6UVK1 AL606517.1-201ENST00000446914 387 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms