Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SMARCD3Q6STE5 HIF1AP1-201ENST00000553642 175 ntBASIC1.22□□□□□ -2.21
SMARCD3Q6STE5 AC136619.2-201ENST00000563361 631 ntBASIC1.22□□□□□ -2.21
SMARCD3Q6STE5 AC068338.1-201ENST00000565567 176 ntBASIC1.22□□□□□ -2.21
SMARCD3Q6STE5 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.22□□□□□ -2.21
SMARCD3Q6STE5 AC093783.1-201ENST00000612976 329 ntBASIC1.22□□□□□ -2.21
SMARCD3Q6STE5 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.22□□□□□ -2.21
SMARCD3Q6STE5 AC048344.4-201ENST00000619744 527 ntBASIC1.22□□□□□ -2.21
SMARCD3Q6STE5 Z69720.2-201ENST00000624755 279 ntBASIC1.22□□□□□ -2.21
SMARCD3Q6STE5 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
SMARCD3Q6STE5 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 Y_RNA.41-201ENST00000362646 102 ntBASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 RNU6-259P-201ENST00000383999 107 ntBASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 Y_RNA.436-201ENST00000384097 102 ntBASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 RNU5A-6P-201ENST00000384136 116 ntBASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 RNU6-780P-201ENST00000391030 104 ntBASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 CALM2P3-201ENST00000400429 449 ntBASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 MIR1262-201ENST00000408276 93 ntBASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 RNU2-29P-201ENST00000410423 189 ntBASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 AL663109.1-201ENST00000411498 844 ntBASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 AC073415.1-201ENST00000449240 153 ntBASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 AC012308.1-201ENST00000451232 178 ntBASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 AL356010.1-201ENST00000456364 102 ntBASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 SNRPFP3-201ENST00000457792 225 ntBASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 RNU7-180P-201ENST00000459240 63 ntBASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 GMFBP1-201ENST00000467831 427 ntBASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 AC010493.1-201ENST00000513479 292 ntBASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 SNORA25.17-201ENST00000517184 124 ntBASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 SUB1P3-201ENST00000564581 315 ntBASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 AC103987.3-201ENST00000582071 292 ntBASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 RPL30P11-203ENST00000598995 310 ntBASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 RMST_6.1-201ENST00000611980 203 ntBASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 AL158209.2-201ENST00000619266 216 ntBASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 AC139792.3-201ENST00000623525 224 ntBASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 SCARNA4-202ENST00000625402 129 ntBASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 OR5AK4P-201ENST00000635912 903 ntBASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 MIR6863-201ENST00000636112 90 ntBASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 MIR3529-201ENST00000637713 78 ntBASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
SMARCD3Q6STE5 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 RNU6-527P-201ENST00000363425 104 ntBASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 Y_RNA.194-201ENST00000363985 102 ntBASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 RNU6-457P-201ENST00000363999 107 ntBASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 RNU5E-7P-201ENST00000365290 117 ntBASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 RNU6-517P-201ENST00000384362 110 ntBASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 RNU6-434P-201ENST00000384376 107 ntBASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 Y_RNA.559-201ENST00000384686 107 ntBASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 MIR186-201ENST00000384988 86 ntBASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 RNA5SP213-201ENST00000391031 106 ntBASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 RNU11-3P-201ENST00000391111 133 ntBASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 RPL30P13-201ENST00000418873 348 ntBASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 AL121601.2-201ENST00000438019 707 ntBASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 AC007969.2-201ENST00000441891 191 ntBASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 HMGB1P29-201ENST00000505659 499 ntBASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 AC105417.1-201ENST00000514691 285 ntBASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 RNU6-237P-201ENST00000515985 71 ntBASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 RNU2-53P-201ENST00000516257 147 ntBASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 RNU1-92P-201ENST00000517017 135 ntBASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 AL137161.1-201ENST00000532231 390 ntBASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 AC093249.1-201ENST00000567049 203 ntBASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 MIR4769-201ENST00000584126 77 ntBASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 AC073410.2-201ENST00000603240 332 ntBASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 AC012507.3-201ENST00000603556 477 ntBASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 RNU6-91P-201ENST00000607774 107 ntBASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 AC104073.3-201ENST00000610942 955 ntBASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 uc_338.15-201ENST00000615470 191 ntBASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 AC022418.1-201ENST00000624118 445 ntBASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 U4.7-201ENST00000638126 106 ntBASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.2□□□□□ -2.22
SMARCD3Q6STE5 RNU6-212P-201ENST00000362642 104 ntBASIC1.19□□□□□ -2.22
SMARCD3Q6STE5 Y_RNA.318-201ENST00000365131 97 ntBASIC1.19□□□□□ -2.22
SMARCD3Q6STE5 U8.10-201ENST00000384260 133 ntBASIC1.19□□□□□ -2.22
SMARCD3Q6STE5 MIR544A-201ENST00000384855 91 ntBASIC1.19□□□□□ -2.22
SMARCD3Q6STE5 MIR597-201ENST00000384968 97 ntBASIC1.19□□□□□ -2.22
SMARCD3Q6STE5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
SMARCD3Q6STE5 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SMARCD3Q6STE5 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SMARCD3Q6STE5 RAP1BP3-201ENST00000407180 549 ntBASIC1.19□□□□□ -2.22
SMARCD3Q6STE5 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.19□□□□□ -2.22
SMARCD3Q6STE5 AL365400.1-201ENST00000431854 640 ntBASIC1.19□□□□□ -2.22
SMARCD3Q6STE5 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.19□□□□□ -2.22
SMARCD3Q6STE5 AC015922.2-201ENST00000435593 184 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms