Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 AC096725.1-201ENST00000514266 313 ntBASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 SCARNA16.2-201ENST00000516520 172 ntBASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 SNORA43.2-201ENST00000516652 128 ntBASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 AC010186.2-204ENST00000537668 439 ntBASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 AC109446.1-201ENST00000566172 220 ntBASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 MIR5092-201ENST00000583139 88 ntBASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 AL360085.1-201ENST00000604713 532 ntBASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 AC018889.1-201ENST00000605372 397 ntBASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 MIR3976-201ENST00000606807 139 ntBASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 MIR7106-201ENST00000612419 65 ntBASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 MIR7157-201ENST00000635801 60 ntBASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 CDC27P3-201ENST00000635418 1910 ntBASIC2.21□□□□□ -2.06
SNAI3Q3KNW1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 RNU6-490P-201ENST00000362985 107 ntBASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 Y_RNA.252-201ENST00000364556 101 ntBASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 RNU6-1280P-201ENST00000365211 107 ntBASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 RNU6-738P-201ENST00000384531 106 ntBASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 MIR606-201ENST00000384851 96 ntBASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 BX276092.3-201ENST00000424182 230 ntBASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 RPL30P4-201ENST00000429309 333 ntBASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 AC004383.1-201ENST00000438135 289 ntBASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 AL035666.1-201ENST00000446195 348 ntBASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 MTND4P19-201ENST00000446659 478 ntBASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 BTF3P15-201ENST00000455606 336 ntBASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 HMGN1P10-201ENST00000474557 553 ntBASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 AK3P2-201ENST00000507976 429 ntBASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 SNORA25.11-201ENST00000515935 105 ntBASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 ACA59.1-201ENST00000515966 143 ntBASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 RNU6-120P-201ENST00000516077 103 ntBASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 RNU6-307P-201ENST00000516743 106 ntBASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 AC109329.2-201ENST00000519658 482 ntBASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 MIR5571-201ENST00000577998 113 ntBASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 uc_338.14-201ENST00000613162 166 ntBASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 AC040896.1-201ENST00000613819 479 ntBASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 AC091925.1-201ENST00000623204 462 ntBASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.2□□□□□ -2.06
SNAI3Q3KNW1 AC080100.1-201ENST00000624239 5356 ntBASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 RNU6-336P-201ENST00000364891 107 ntBASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 DEFA7P-201ENST00000382676 285 ntBASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 RNU6-933P-201ENST00000384424 107 ntBASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 RNU6-1160P-201ENST00000384546 104 ntBASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 AL591034.2-201ENST00000402839 359 ntBASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 MTND2P23-201ENST00000422990 651 ntBASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 MICF-203ENST00000432679 129 ntBASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 U8.21-201ENST00000459536 136 ntBASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 RPS29P27-201ENST00000463711 170 ntBASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 AC068781.1-201ENST00000488231 618 ntBASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 AC022493.2-201ENST00000506122 481 ntBASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 RNA5SP356-201ENST00000515972 94 ntBASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 RNU6-327P-201ENST00000516270 127 ntBASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 RNU6-699P-201ENST00000517081 110 ntBASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 RN7SKP295-201ENST00000517264 153 ntBASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 RNU6-988P-201ENST00000519081 107 ntBASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 AP005902.1-201ENST00000521358 186 ntBASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 AP004607.1-201ENST00000524456 203 ntBASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 MIR4319-201ENST00000577285 85 ntBASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 AC006504.6-201ENST00000590142 199 ntBASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 VN1R107P-201ENST00000601784 209 ntBASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 AC016925.2-201ENST00000605108 242 ntBASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 AC116312.1-201ENST00000606841 314 ntBASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 MIR8076-201ENST00000611401 83 ntBASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 AL359854.1-201ENST00000614203 1594 ntBASIC2.19□□□□□ -2.06
SNAI3Q3KNW1 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 AL109809.4-201ENST00000603520 2185 ntBASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 AC062016.1-201ENST00000355719 319 ntBASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 Y_RNA.148-201ENST00000363557 117 ntBASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 RNU6-105P-201ENST00000363909 104 ntBASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 Y_RNA.496-201ENST00000384444 101 ntBASIC2.18□□□□□ -2.06
SNAI3Q3KNW1 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms