Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 U8.22-201ENST00000459141 133 ntBASIC3.61□□□□□ -1.83
SSRP1Q08945 HMGB1P35-201ENST00000503360 598 ntBASIC3.61□□□□□ -1.83
SSRP1Q08945 MRPS36P2-201ENST00000512569 299 ntBASIC3.61□□□□□ -1.83
SSRP1Q08945 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.61□□□□□ -1.83
SSRP1Q08945 SNORA31.6-201ENST00000516241 130 ntBASIC3.61□□□□□ -1.83
SSRP1Q08945 RNU6-635P-201ENST00000516651 102 ntBASIC3.61□□□□□ -1.83
SSRP1Q08945 RNU6-1198P-201ENST00000516904 67 ntBASIC3.61□□□□□ -1.83
SSRP1Q08945 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.61□□□□□ -1.83
SSRP1Q08945 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.61□□□□□ -1.83
SSRP1Q08945 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.61□□□□□ -1.83
SSRP1Q08945 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.61□□□□□ -1.83
SSRP1Q08945 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.61□□□□□ -1.83
SSRP1Q08945 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.61□□□□□ -1.83
SSRP1Q08945 AL138963.2-201ENST00000605137 226 ntBASIC3.61□□□□□ -1.83
SSRP1Q08945 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.61□□□□□ -1.83
SSRP1Q08945 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
SSRP1Q08945 AC093908.1-201ENST00000623125 8092 ntBASIC3.6□□□□□ -1.83
SSRP1Q08945 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SSRP1Q08945 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SSRP1Q08945 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.6□□□□□ -1.83
SSRP1Q08945 RNU1-76P-201ENST00000362903 159 ntBASIC3.6□□□□□ -1.83
SSRP1Q08945 RNU6-137P-201ENST00000363680 108 ntBASIC3.6□□□□□ -1.83
SSRP1Q08945 RNU6-1083P-201ENST00000384022 107 ntBASIC3.6□□□□□ -1.83
SSRP1Q08945 RNU1-57P-201ENST00000384491 166 ntBASIC3.6□□□□□ -1.83
SSRP1Q08945 U3.26-201ENST00000391236 204 ntBASIC3.6□□□□□ -1.83
SSRP1Q08945 AIMP1P2-201ENST00000425294 312 ntBASIC3.6□□□□□ -1.83
SSRP1Q08945 AC073910.1-201ENST00000445047 438 ntBASIC3.6□□□□□ -1.83
SSRP1Q08945 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.6□□□□□ -1.83
SSRP1Q08945 AP000705.1-201ENST00000454567 350 ntBASIC3.6□□□□□ -1.83
SSRP1Q08945 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.6□□□□□ -1.83
SSRP1Q08945 AP000870.1-201ENST00000472927 406 ntBASIC3.6□□□□□ -1.83
SSRP1Q08945 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.6□□□□□ -1.83
SSRP1Q08945 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.6□□□□□ -1.83
SSRP1Q08945 RNU6-1114P-201ENST00000516022 107 ntBASIC3.6□□□□□ -1.83
SSRP1Q08945 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.6□□□□□ -1.83
SSRP1Q08945 AP002770.2-201ENST00000543613 532 ntBASIC3.6□□□□□ -1.83
SSRP1Q08945 AC027288.2-201ENST00000553028 243 ntBASIC3.6□□□□□ -1.83
SSRP1Q08945 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.6□□□□□ -1.83
SSRP1Q08945 AL034555.1-201ENST00000604816 211 ntBASIC3.6□□□□□ -1.83
SSRP1Q08945 MIR622-201ENST00000638396 96 ntBASIC3.6□□□□□ -1.83
SSRP1Q08945 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SSRP1Q08945 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.59□□□□□ -1.83
SSRP1Q08945 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SSRP1Q08945 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.59□□□□□ -1.83
SSRP1Q08945 Y_RNA.47-201ENST00000362697 108 ntBASIC3.59□□□□□ -1.83
SSRP1Q08945 SNORD115-8-201ENST00000363856 82 ntBASIC3.59□□□□□ -1.83
SSRP1Q08945 Y_RNA.210-201ENST00000364161 110 ntBASIC3.59□□□□□ -1.83
SSRP1Q08945 SNORD115-38-201ENST00000365037 82 ntBASIC3.59□□□□□ -1.83
SSRP1Q08945 RNU6-708P-201ENST00000384217 107 ntBASIC3.59□□□□□ -1.83
SSRP1Q08945 RNY3P4-201ENST00000384428 101 ntBASIC3.59□□□□□ -1.83
SSRP1Q08945 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.59□□□□□ -1.83
SSRP1Q08945 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.59□□□□□ -1.83
SSRP1Q08945 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.59□□□□□ -1.83
SSRP1Q08945 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.59□□□□□ -1.83
SSRP1Q08945 Z98742.2-201ENST00000431564 187 ntBASIC3.59□□□□□ -1.83
SSRP1Q08945 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.59□□□□□ -1.83
SSRP1Q08945 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.59□□□□□ -1.83
SSRP1Q08945 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.59□□□□□ -1.83
SSRP1Q08945 PHBP14-201ENST00000512887 367 ntBASIC3.59□□□□□ -1.83
SSRP1Q08945 AC022868.1-201ENST00000517767 391 ntBASIC3.59□□□□□ -1.83
SSRP1Q08945 AC034114.1-201ENST00000520293 285 ntBASIC3.59□□□□□ -1.83
SSRP1Q08945 AC068657.1-201ENST00000520807 306 ntBASIC3.59□□□□□ -1.83
SSRP1Q08945 CYP4A27P-201ENST00000567218 190 ntBASIC3.59□□□□□ -1.83
SSRP1Q08945 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.59□□□□□ -1.83
SSRP1Q08945 AC011471.1-201ENST00000585766 187 ntBASIC3.59□□□□□ -1.83
SSRP1Q08945 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SSRP1Q08945 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.59□□□□□ -1.84
SSRP1Q08945 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SSRP1Q08945 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.58□□□□□ -1.84
SSRP1Q08945 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.58□□□□□ -1.84
SSRP1Q08945 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
SSRP1Q08945 MIR148B-201ENST00000362252 99 ntBASIC3.58□□□□□ -1.84
SSRP1Q08945 RNU6-655P-201ENST00000362858 107 ntBASIC3.58□□□□□ -1.84
SSRP1Q08945 RNU6-1210P-201ENST00000363775 107 ntBASIC3.58□□□□□ -1.84
SSRP1Q08945 Y_RNA.574-201ENST00000384766 95 ntBASIC3.58□□□□□ -1.84
SSRP1Q08945 MIR568-201ENST00000385036 95 ntBASIC3.58□□□□□ -1.84
SSRP1Q08945 SNORD67-201ENST00000390833 111 ntBASIC3.58□□□□□ -1.84
SSRP1Q08945 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SSRP1Q08945 AC097463.2-201ENST00000421074 142 ntBASIC3.58□□□□□ -1.84
SSRP1Q08945 EIF1P2-201ENST00000428233 350 ntBASIC3.58□□□□□ -1.84
SSRP1Q08945 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.58□□□□□ -1.84
SSRP1Q08945 BX510359.1-201ENST00000456973 237 ntBASIC3.58□□□□□ -1.84
SSRP1Q08945 AL121594.1-201ENST00000475906 575 ntBASIC3.58□□□□□ -1.84
SSRP1Q08945 RN7SL504P-201ENST00000494496 287 ntBASIC3.58□□□□□ -1.84
SSRP1Q08945 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.58□□□□□ -1.84
SSRP1Q08945 AP002404.1-201ENST00000532005 451 ntBASIC3.58□□□□□ -1.84
SSRP1Q08945 MIR5004-201ENST00000579078 107 ntBASIC3.58□□□□□ -1.84
SSRP1Q08945 MIR5195-201ENST00000583555 115 ntBASIC3.58□□□□□ -1.84
SSRP1Q08945 MIR4765-201ENST00000585007 77 ntBASIC3.58□□□□□ -1.84
SSRP1Q08945 AC107294.3-201ENST00000609211 526 ntBASIC3.58□□□□□ -1.84
SSRP1Q08945 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.58□□□□□ -1.84
SSRP1Q08945 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.58□□□□□ -1.84
SSRP1Q08945 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
SSRP1Q08945 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.58□□□□□ -1.84
SSRP1Q08945 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SSRP1Q08945 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SSRP1Q08945 SNORA38.1-201ENST00000364172 131 ntBASIC3.57□□□□□ -1.84
SSRP1Q08945 Y_RNA.276-201ENST00000364732 109 ntBASIC3.57□□□□□ -1.84
SSRP1Q08945 Y_RNA.471-201ENST00000384312 102 ntBASIC3.57□□□□□ -1.84
SSRP1Q08945 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms