Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 SNORD50B-201ENST00000364995 70 ntBASIC3.87□□□□□ -1.79
PCDH1Q08174 SNORA70C-201ENST00000384538 135 ntBASIC3.87□□□□□ -1.79
PCDH1Q08174 RNU6-959P-201ENST00000384671 107 ntBASIC3.87□□□□□ -1.79
PCDH1Q08174 Y_RNA.568-201ENST00000384742 113 ntBASIC3.87□□□□□ -1.79
PCDH1Q08174 RNU6-131P-201ENST00000391144 107 ntBASIC3.87□□□□□ -1.79
PCDH1Q08174 RPS26P8-201ENST00000393490 348 ntBASIC3.87□□□□□ -1.79
PCDH1Q08174 AC245291.1-201ENST00000419501 328 ntBASIC3.87□□□□□ -1.79
PCDH1Q08174 AL162725.1-201ENST00000435405 301 ntBASIC3.87□□□□□ -1.79
PCDH1Q08174 SEPT7P4-201ENST00000437076 306 ntBASIC3.87□□□□□ -1.79
PCDH1Q08174 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDH1Q08174 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDH1Q08174 AL441985.1-201ENST00000457727 251 ntBASIC3.87□□□□□ -1.79
PCDH1Q08174 RPL32P34-201ENST00000486380 400 ntBASIC3.87□□□□□ -1.79
PCDH1Q08174 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.87□□□□□ -1.79
PCDH1Q08174 RNA5SP309-201ENST00000516670 106 ntBASIC3.87□□□□□ -1.79
PCDH1Q08174 AC100767.1-201ENST00000528178 123 ntBASIC3.87□□□□□ -1.79
PCDH1Q08174 GNRHR2P1-201ENST00000555315 631 ntBASIC3.87□□□□□ -1.79
PCDH1Q08174 AC027176.1-201ENST00000560204 514 ntBASIC3.87□□□□□ -1.79
PCDH1Q08174 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.87□□□□□ -1.79
PCDH1Q08174 AL078604.3-201ENST00000615580 211 ntBASIC3.87□□□□□ -1.79
PCDH1Q08174 AC018692.3-201ENST00000623929 123 ntBASIC3.87□□□□□ -1.79
PCDH1Q08174 AC091895.1-201ENST00000624494 256 ntBASIC3.87□□□□□ -1.79
PCDH1Q08174 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.87□□□□□ -1.79
PCDH1Q08174 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
PCDH1Q08174 UBE3AP2-201ENST00000429033 2259 ntBASIC3.86□□□□□ -1.79
PCDH1Q08174 Y_RNA.40-201ENST00000362645 93 ntBASIC3.86□□□□□ -1.79
PCDH1Q08174 RNU6-1010P-201ENST00000362757 107 ntBASIC3.86□□□□□ -1.79
PCDH1Q08174 MIR186-201ENST00000384988 86 ntBASIC3.86□□□□□ -1.79
PCDH1Q08174 MIR1193-201ENST00000408109 78 ntBASIC3.86□□□□□ -1.79
PCDH1Q08174 U8.19-201ENST00000459095 133 ntBASIC3.86□□□□□ -1.79
PCDH1Q08174 snoU13.14-201ENST00000459372 104 ntBASIC3.86□□□□□ -1.79
PCDH1Q08174 RPL31P41-201ENST00000477967 372 ntBASIC3.86□□□□□ -1.79
PCDH1Q08174 RPL30P14-201ENST00000482744 348 ntBASIC3.86□□□□□ -1.79
PCDH1Q08174 RNU6-344P-201ENST00000516635 111 ntBASIC3.86□□□□□ -1.79
PCDH1Q08174 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.86□□□□□ -1.79
PCDH1Q08174 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.86□□□□□ -1.79
PCDH1Q08174 EIF4A1P12-201ENST00000551910 141 ntBASIC3.86□□□□□ -1.79
PCDH1Q08174 SNORD11B-201ENST00000607707 90 ntBASIC3.86□□□□□ -1.79
PCDH1Q08174 AC069200.1-201ENST00000609511 323 ntBASIC3.86□□□□□ -1.79
PCDH1Q08174 TCL6_2.1-201ENST00000615162 119 ntBASIC3.86□□□□□ -1.79
PCDH1Q08174 AC005562.2-201ENST00000618264 111 ntBASIC3.86□□□□□ -1.79
PCDH1Q08174 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.86□□□□□ -1.79
PCDH1Q08174 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.86□□□□□ -1.79
PCDH1Q08174 Z82217.1-201ENST00000625157 8149 ntBASIC3.86□□□□□ -1.79
PCDH1Q08174 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCDH1Q08174 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.86□□□□□ -1.79
PCDH1Q08174 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.86□□□□□ -1.79
PCDH1Q08174 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
PCDH1Q08174 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.86□□□□□ -1.79
PCDH1Q08174 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.85□□□□□ -1.79
PCDH1Q08174 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PCDH1Q08174 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
PCDH1Q08174 SNORD35B-201ENST00000363660 87 ntBASIC3.85□□□□□ -1.79
PCDH1Q08174 Y_RNA.215-201ENST00000364204 112 ntBASIC3.85□□□□□ -1.79
PCDH1Q08174 RNU6-22P-201ENST00000384355 107 ntBASIC3.85□□□□□ -1.79
PCDH1Q08174 RN7SKP27-201ENST00000410684 333 ntBASIC3.85□□□□□ -1.79
PCDH1Q08174 AC004866.1-201ENST00000411748 78 ntBASIC3.85□□□□□ -1.79
PCDH1Q08174 AC027124.2-201ENST00000428249 105 ntBASIC3.85□□□□□ -1.79
PCDH1Q08174 AC004975.1-201ENST00000428733 208 ntBASIC3.85□□□□□ -1.79
PCDH1Q08174 AL714022.1-201ENST00000439897 151 ntBASIC3.85□□□□□ -1.79
PCDH1Q08174 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PCDH1Q08174 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.85□□□□□ -1.79
PCDH1Q08174 RPS20P10-201ENST00000451209 253 ntBASIC3.85□□□□□ -1.79
PCDH1Q08174 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.85□□□□□ -1.79
PCDH1Q08174 RNU6-62P-201ENST00000516526 102 ntBASIC3.85□□□□□ -1.79
PCDH1Q08174 MIR6868-201ENST00000611215 58 ntBASIC3.85□□□□□ -1.79
PCDH1Q08174 MIR486-1-201ENST00000612171 68 ntBASIC3.85□□□□□ -1.79
PCDH1Q08174 AC002076.2-201ENST00000617362 122 ntBASIC3.85□□□□□ -1.79
PCDH1Q08174 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PCDH1Q08174 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
PCDH1Q08174 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.85□□□□□ -1.79
PCDH1Q08174 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PCDH1Q08174 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.85□□□□□ -1.79
PCDH1Q08174 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.84□□□□□ -1.79
PCDH1Q08174 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
PCDH1Q08174 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PCDH1Q08174 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
PCDH1Q08174 SNORD114-19-201ENST00000363072 75 ntBASIC3.84□□□□□ -1.79
PCDH1Q08174 RNA5SP399-201ENST00000364003 117 ntBASIC3.84□□□□□ -1.79
PCDH1Q08174 RNU6-1027P-201ENST00000383998 107 ntBASIC3.84□□□□□ -1.79
PCDH1Q08174 RNU6-417P-201ENST00000384712 107 ntBASIC3.84□□□□□ -1.79
PCDH1Q08174 HSPE1P26-201ENST00000405341 275 ntBASIC3.84□□□□□ -1.79
PCDH1Q08174 RNU2-49P-201ENST00000410666 184 ntBASIC3.84□□□□□ -1.79
PCDH1Q08174 AL356095.1-201ENST00000417217 199 ntBASIC3.84□□□□□ -1.79
PCDH1Q08174 AIMP1P2-201ENST00000425294 312 ntBASIC3.84□□□□□ -1.79
PCDH1Q08174 RN7SL132P-201ENST00000478131 296 ntBASIC3.84□□□□□ -1.79
PCDH1Q08174 RNU6-479P-201ENST00000516348 105 ntBASIC3.84□□□□□ -1.79
PCDH1Q08174 AC136628.3-201ENST00000521868 290 ntBASIC3.84□□□□□ -1.79
PCDH1Q08174 AC012493.2-201ENST00000595083 291 ntBASIC3.84□□□□□ -1.79
PCDH1Q08174 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.84□□□□□ -1.79
PCDH1Q08174 AL137843.1-201ENST00000605078 385 ntBASIC3.84□□□□□ -1.79
PCDH1Q08174 AC068205.3-201ENST00000636385 468 ntBASIC3.84□□□□□ -1.79
PCDH1Q08174 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.84□□□□□ -1.79
PCDH1Q08174 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
PCDH1Q08174 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.8
PCDH1Q08174 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
PCDH1Q08174 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDH1Q08174 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PCDH1Q08174 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PCDH1Q08174 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms