Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RNU6-250P-201ENST00000516958 103 ntBASIC1.59□□□□□ -2.15
PKNOX1P55347 MTND4P7-201ENST00000523876 130 ntBASIC1.59□□□□□ -2.15
PKNOX1P55347 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.59□□□□□ -2.15
PKNOX1P55347 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.59□□□□□ -2.15
PKNOX1P55347 AC010620.1-201ENST00000601088 1102 ntBASIC1.59□□□□□ -2.15
PKNOX1P55347 AL356157.2-201ENST00000605122 111 ntBASIC1.59□□□□□ -2.15
PKNOX1P55347 AP000654.2-201ENST00000605633 586 ntBASIC1.59□□□□□ -2.15
PKNOX1P55347 RMST_6.1-201ENST00000611980 203 ntBASIC1.59□□□□□ -2.15
PKNOX1P55347 SNORA43.4-201ENST00000629559 138 ntBASIC1.59□□□□□ -2.15
PKNOX1P55347 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
PKNOX1P55347 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
PKNOX1P55347 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
PKNOX1P55347 SNORD116-9-201ENST00000384000 95 ntBASIC1.58□□□□□ -2.16
PKNOX1P55347 SNORD116-3-201ENST00000384287 95 ntBASIC1.58□□□□□ -2.16
PKNOX1P55347 SNORD116-7-201ENST00000384404 95 ntBASIC1.58□□□□□ -2.16
PKNOX1P55347 SNORD116-5-201ENST00000384462 95 ntBASIC1.58□□□□□ -2.16
PKNOX1P55347 U8.13-201ENST00000390842 128 ntBASIC1.58□□□□□ -2.16
PKNOX1P55347 RNA5SP219-201ENST00000390940 113 ntBASIC1.58□□□□□ -2.16
PKNOX1P55347 RPL17P50-201ENST00000396131 546 ntBASIC1.58□□□□□ -2.16
PKNOX1P55347 AL606923.1-201ENST00000406616 190 ntBASIC1.58□□□□□ -2.16
PKNOX1P55347 POLHP1-201ENST00000411806 470 ntBASIC1.58□□□□□ -2.16
PKNOX1P55347 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.58□□□□□ -2.16
PKNOX1P55347 RPL39P5-202ENST00000512505 151 ntBASIC1.58□□□□□ -2.16
PKNOX1P55347 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.58□□□□□ -2.16
PKNOX1P55347 CBX3P4-201ENST00000538909 354 ntBASIC1.58□□□□□ -2.16
PKNOX1P55347 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.58□□□□□ -2.16
PKNOX1P55347 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.58□□□□□ -2.16
PKNOX1P55347 AC087683.1-201ENST00000591187 441 ntBASIC1.58□□□□□ -2.16
PKNOX1P55347 VN1R80P-201ENST00000597126 338 ntBASIC1.58□□□□□ -2.16
PKNOX1P55347 AC025754.2-201ENST00000606491 432 ntBASIC1.58□□□□□ -2.16
PKNOX1P55347 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.58□□□□□ -2.16
PKNOX1P55347 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
PKNOX1P55347 WWP1P1-201ENST00000466609 2769 ntBASIC1.57□□□□□ -2.16
PKNOX1P55347 SNORD114-6-201ENST00000364393 72 ntBASIC1.57□□□□□ -2.16
PKNOX1P55347 Y_RNA.332-201ENST00000365271 113 ntBASIC1.57□□□□□ -2.16
PKNOX1P55347 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
PKNOX1P55347 SNORA36A-201ENST00000384221 132 ntBASIC1.57□□□□□ -2.16
PKNOX1P55347 RNU6-997P-201ENST00000384725 107 ntBASIC1.57□□□□□ -2.16
PKNOX1P55347 RN7SKP101-201ENST00000411376 320 ntBASIC1.57□□□□□ -2.16
PKNOX1P55347 AC009310.1-201ENST00000414414 451 ntBASIC1.57□□□□□ -2.16
PKNOX1P55347 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.57□□□□□ -2.16
PKNOX1P55347 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.57□□□□□ -2.16
PKNOX1P55347 AL121601.2-201ENST00000438019 707 ntBASIC1.57□□□□□ -2.16
PKNOX1P55347 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.57□□□□□ -2.16
PKNOX1P55347 HMGN2P18-201ENST00000450680 270 ntBASIC1.57□□□□□ -2.16
PKNOX1P55347 RNU6-333P-201ENST00000459117 107 ntBASIC1.57□□□□□ -2.16
PKNOX1P55347 MTCO3P38-201ENST00000468910 766 ntBASIC1.57□□□□□ -2.16
PKNOX1P55347 RPL23AP63-201ENST00000498752 471 ntBASIC1.57□□□□□ -2.16
PKNOX1P55347 SNORA14.1-201ENST00000516113 141 ntBASIC1.57□□□□□ -2.16
PKNOX1P55347 RNA5SP490-201ENST00000517141 136 ntBASIC1.57□□□□□ -2.16
PKNOX1P55347 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.57□□□□□ -2.16
PKNOX1P55347 AL118558.2-201ENST00000556294 238 ntBASIC1.57□□□□□ -2.16
PKNOX1P55347 MIR3169-201ENST00000578032 83 ntBASIC1.57□□□□□ -2.16
PKNOX1P55347 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.57□□□□□ -2.16
PKNOX1P55347 MTND1P15-201ENST00000579262 949 ntBASIC1.57□□□□□ -2.16
PKNOX1P55347 MIR3611-201ENST00000584484 83 ntBASIC1.57□□□□□ -2.16
PKNOX1P55347 MIR502-201ENST00000606349 86 ntBASIC1.57□□□□□ -2.16
PKNOX1P55347 AP001330.5-201ENST00000607176 411 ntBASIC1.57□□□□□ -2.16
PKNOX1P55347 AL022345.1-201ENST00000607292 135 ntBASIC1.57□□□□□ -2.16
PKNOX1P55347 AC017083.3-201ENST00000609955 700 ntBASIC1.57□□□□□ -2.16
PKNOX1P55347 AL590240.4-201ENST00000616908 390 ntBASIC1.57□□□□□ -2.16
PKNOX1P55347 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
PKNOX1P55347 AC092268.1-201ENST00000342691 405 ntBASIC1.56□□□□□ -2.16
PKNOX1P55347 RNA5SP493-201ENST00000364115 91 ntBASIC1.56□□□□□ -2.16
PKNOX1P55347 RNU6-26P-201ENST00000383985 107 ntBASIC1.56□□□□□ -2.16
PKNOX1P55347 AL357139.1-201ENST00000407792 426 ntBASIC1.56□□□□□ -2.16
PKNOX1P55347 AP000275.1-201ENST00000411943 390 ntBASIC1.56□□□□□ -2.16
PKNOX1P55347 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.56□□□□□ -2.16
PKNOX1P55347 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
PKNOX1P55347 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.56□□□□□ -2.16
PKNOX1P55347 HSPE1P21-201ENST00000438283 308 ntBASIC1.56□□□□□ -2.16
PKNOX1P55347 RNU7-138P-201ENST00000459479 64 ntBASIC1.56□□□□□ -2.16
PKNOX1P55347 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.56□□□□□ -2.16
PKNOX1P55347 AC016632.1-201ENST00000503994 196 ntBASIC1.56□□□□□ -2.16
PKNOX1P55347 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.56□□□□□ -2.16
PKNOX1P55347 ATP5EP1-201ENST00000510257 156 ntBASIC1.56□□□□□ -2.16
PKNOX1P55347 RNU6-1038P-201ENST00000516516 104 ntBASIC1.56□□□□□ -2.16
PKNOX1P55347 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.56□□□□□ -2.16
PKNOX1P55347 CYP2C61P-201ENST00000604072 290 ntBASIC1.56□□□□□ -2.16
PKNOX1P55347 Z98751.3-201ENST00000604447 521 ntBASIC1.56□□□□□ -2.16
PKNOX1P55347 uc_338.5-201ENST00000611839 155 ntBASIC1.56□□□□□ -2.16
PKNOX1P55347 PCGEM1.1-201ENST00000613431 131 ntBASIC1.56□□□□□ -2.16
PKNOX1P55347 AC139792.3-201ENST00000623525 224 ntBASIC1.56□□□□□ -2.16
PKNOX1P55347 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
PKNOX1P55347 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.55□□□□□ -2.16
PKNOX1P55347 MIR340-201ENST00000362125 95 ntBASIC1.55□□□□□ -2.16
PKNOX1P55347 RNU6-23P-201ENST00000363283 107 ntBASIC1.55□□□□□ -2.16
PKNOX1P55347 RNU4-20P-201ENST00000365601 151 ntBASIC1.55□□□□□ -2.16
PKNOX1P55347 SNORD116-1-201ENST00000384335 95 ntBASIC1.55□□□□□ -2.16
PKNOX1P55347 Y_RNA.504-201ENST00000384481 104 ntBASIC1.55□□□□□ -2.16
PKNOX1P55347 AL663109.1-201ENST00000411498 844 ntBASIC1.55□□□□□ -2.16
PKNOX1P55347 VN1R36P-201ENST00000414936 291 ntBASIC1.55□□□□□ -2.16
PKNOX1P55347 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.55□□□□□ -2.16
PKNOX1P55347 MTCO2P3-201ENST00000442543 421 ntBASIC1.55□□□□□ -2.16
PKNOX1P55347 AL035666.1-201ENST00000446195 348 ntBASIC1.55□□□□□ -2.16
PKNOX1P55347 FTH1P25-201ENST00000447665 469 ntBASIC1.55□□□□□ -2.16
PKNOX1P55347 AC007547.1-201ENST00000462177 490 ntBASIC1.55□□□□□ -2.16
PKNOX1P55347 AC132942.1-201ENST00000486753 483 ntBASIC1.55□□□□□ -2.16
PKNOX1P55347 RNU1-41P-201ENST00000516161 162 ntBASIC1.55□□□□□ -2.16
PKNOX1P55347 RNU6-970P-201ENST00000516312 107 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms