Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AC022616.8-201ENST00000533569 253 ntBASIC1.64□□□□□ -2.15
APOC4P55056 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.64□□□□□ -2.15
APOC4P55056 SCOCP1-201ENST00000554676 349 ntBASIC1.64□□□□□ -2.15
APOC4P55056 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.64□□□□□ -2.15
APOC4P55056 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.64□□□□□ -2.15
APOC4P55056 AL031274.2-201ENST00000599419 203 ntBASIC1.64□□□□□ -2.15
APOC4P55056 AL096840.1-201ENST00000603287 93 ntBASIC1.64□□□□□ -2.15
APOC4P55056 SNORA43.4-201ENST00000629559 138 ntBASIC1.64□□□□□ -2.15
APOC4P55056 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.64□□□□□ -2.15
APOC4P55056 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.64□□□□□ -2.15
APOC4P55056 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.64□□□□□ -2.15
APOC4P55056 KPNA2P1-201ENST00000458289 1591 ntBASIC1.64□□□□□ -2.15
APOC4P55056 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
APOC4P55056 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
APOC4P55056 AC092268.1-201ENST00000342691 405 ntBASIC1.63□□□□□ -2.15
APOC4P55056 MIR21-201ENST00000362134 72 ntBASIC1.63□□□□□ -2.15
APOC4P55056 SNORD32B-201ENST00000364460 84 ntBASIC1.63□□□□□ -2.15
APOC4P55056 RNU6-534P-201ENST00000364877 106 ntBASIC1.63□□□□□ -2.15
APOC4P55056 RNU6-611P-201ENST00000384276 104 ntBASIC1.63□□□□□ -2.15
APOC4P55056 RNU6-1106P-201ENST00000390845 107 ntBASIC1.63□□□□□ -2.15
APOC4P55056 SNORA48.3-201ENST00000391081 134 ntBASIC1.63□□□□□ -2.15
APOC4P55056 UBE2V1P4-201ENST00000425374 344 ntBASIC1.63□□□□□ -2.15
APOC4P55056 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.63□□□□□ -2.15
APOC4P55056 CBX3P6-201ENST00000430257 527 ntBASIC1.63□□□□□ -2.15
APOC4P55056 RPL23AP3-201ENST00000453844 468 ntBASIC1.63□□□□□ -2.15
APOC4P55056 AMD1P1-201ENST00000457220 922 ntBASIC1.63□□□□□ -2.15
APOC4P55056 RPL9P9-202ENST00000466501 579 ntBASIC1.63□□□□□ -2.15
APOC4P55056 RPS29P25-201ENST00000481709 171 ntBASIC1.63□□□□□ -2.15
APOC4P55056 AC008628.2-201ENST00000502605 298 ntBASIC1.63□□□□□ -2.15
APOC4P55056 FAM206BP-201ENST00000510179 541 ntBASIC1.63□□□□□ -2.15
APOC4P55056 AC025465.4-201ENST00000513422 638 ntBASIC1.63□□□□□ -2.15
APOC4P55056 RNU6-1332P-201ENST00000516666 104 ntBASIC1.63□□□□□ -2.15
APOC4P55056 IGKV3-31-201ENST00000523109 329 ntBASIC1.63□□□□□ -2.15
APOC4P55056 AC008749.1-201ENST00000597650 306 ntBASIC1.63□□□□□ -2.15
APOC4P55056 AC078795.3-201ENST00000602913 472 ntBASIC1.63□□□□□ -2.15
APOC4P55056 AL627230.6-201ENST00000611129 280 ntBASIC1.63□□□□□ -2.15
APOC4P55056 MIR3688-2-201ENST00000636963 87 ntBASIC1.63□□□□□ -2.15
APOC4P55056 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
APOC4P55056 AC092881.1-201ENST00000638218 2733 ntBASIC1.62□□□□□ -2.15
APOC4P55056 AC131280.1-202ENST00000624067 4211 ntBASIC1.62□□□□□ -2.15
APOC4P55056 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
APOC4P55056 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
APOC4P55056 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
APOC4P55056 Y_RNA.6-201ENST00000362350 114 ntBASIC1.62□□□□□ -2.15
APOC4P55056 RNU6-227P-201ENST00000362865 103 ntBASIC1.62□□□□□ -2.15
APOC4P55056 RNU6-1317P-201ENST00000364582 104 ntBASIC1.62□□□□□ -2.15
APOC4P55056 RNU1-51P-201ENST00000365345 176 ntBASIC1.62□□□□□ -2.15
APOC4P55056 RNU6-214P-201ENST00000384130 107 ntBASIC1.62□□□□□ -2.15
APOC4P55056 MIR518A2-201ENST00000384966 87 ntBASIC1.62□□□□□ -2.15
APOC4P55056 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
APOC4P55056 MTCYBP2-201ENST00000407745 171 ntBASIC1.62□□□□□ -2.15
APOC4P55056 RNA5SP181-201ENST00000410246 98 ntBASIC1.62□□□□□ -2.15
APOC4P55056 RNA5SP201-201ENST00000410316 124 ntBASIC1.62□□□□□ -2.15
APOC4P55056 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.62□□□□□ -2.15
APOC4P55056 AL137159.1-201ENST00000452808 512 ntBASIC1.62□□□□□ -2.15
APOC4P55056 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.62□□□□□ -2.15
APOC4P55056 AC145146.1-201ENST00000496370 254 ntBASIC1.62□□□□□ -2.15
APOC4P55056 AC016632.1-201ENST00000503994 196 ntBASIC1.62□□□□□ -2.15
APOC4P55056 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.62□□□□□ -2.15
APOC4P55056 AC107222.1-201ENST00000510899 637 ntBASIC1.62□□□□□ -2.15
APOC4P55056 MRPS17P9-201ENST00000511924 393 ntBASIC1.62□□□□□ -2.15
APOC4P55056 AC011352.1-201ENST00000512300 793 ntBASIC1.62□□□□□ -2.15
APOC4P55056 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.62□□□□□ -2.15
APOC4P55056 RNU6-965P-201ENST00000516721 96 ntBASIC1.62□□□□□ -2.15
APOC4P55056 AC087241.2-201ENST00000535801 324 ntBASIC1.62□□□□□ -2.15
APOC4P55056 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.62□□□□□ -2.15
APOC4P55056 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.62□□□□□ -2.15
APOC4P55056 CPDP1-201ENST00000579660 283 ntBASIC1.62□□□□□ -2.15
APOC4P55056 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.62□□□□□ -2.15
APOC4P55056 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.62□□□□□ -2.15
APOC4P55056 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.62□□□□□ -2.15
APOC4P55056 AC068790.6-201ENST00000602558 258 ntBASIC1.62□□□□□ -2.15
APOC4P55056 AC009831.4-201ENST00000620744 325 ntBASIC1.62□□□□□ -2.15
APOC4P55056 MIR1248-201ENST00000629190 106 ntBASIC1.62□□□□□ -2.15
APOC4P55056 AC073869.6-201ENST00000640656 341 ntBASIC1.62□□□□□ -2.15
APOC4P55056 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
APOC4P55056 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
APOC4P55056 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
APOC4P55056 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.61□□□□□ -2.15
APOC4P55056 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
APOC4P55056 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
APOC4P55056 SNORD113-7-201ENST00000363762 77 ntBASIC1.61□□□□□ -2.15
APOC4P55056 RNU4-52P-201ENST00000384209 138 ntBASIC1.61□□□□□ -2.15
APOC4P55056 SNORA36A-201ENST00000384221 132 ntBASIC1.61□□□□□ -2.15
APOC4P55056 Y_RNA.504-201ENST00000384481 104 ntBASIC1.61□□□□□ -2.15
APOC4P55056 Y_RNA.530-201ENST00000384587 101 ntBASIC1.61□□□□□ -2.15
APOC4P55056 SNORA12-201ENST00000391162 147 ntBASIC1.61□□□□□ -2.15
APOC4P55056 SNORD115-47-201ENST00000391226 86 ntBASIC1.61□□□□□ -2.15
APOC4P55056 MIR1261-201ENST00000408659 82 ntBASIC1.61□□□□□ -2.15
APOC4P55056 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.61□□□□□ -2.15
APOC4P55056 VN1R36P-201ENST00000414936 291 ntBASIC1.61□□□□□ -2.15
APOC4P55056 USP9YP28-201ENST00000435142 589 ntBASIC1.61□□□□□ -2.15
APOC4P55056 AL121890.1-201ENST00000435457 205 ntBASIC1.61□□□□□ -2.15
APOC4P55056 UBE2V1P8-201ENST00000437166 265 ntBASIC1.61□□□□□ -2.15
APOC4P55056 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.61□□□□□ -2.15
APOC4P55056 UBL5P3-201ENST00000475112 231 ntBASIC1.61□□□□□ -2.15
APOC4P55056 RPS29P21-201ENST00000496272 170 ntBASIC1.61□□□□□ -2.15
APOC4P55056 MTCYBP18-201ENST00000501056 747 ntBASIC1.61□□□□□ -2.15
APOC4P55056 YWHAEP4-201ENST00000505390 198 ntBASIC1.61□□□□□ -2.15
APOC4P55056 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms