Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 MIR548P-201ENST00000408336 84 ntBASIC2.44□□□□□ -2.02
CLK1P49759 AL356379.1-201ENST00000414105 126 ntBASIC2.44□□□□□ -2.02
CLK1P49759 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.44□□□□□ -2.02
CLK1P49759 COTL1P1-201ENST00000422309 375 ntBASIC2.44□□□□□ -2.02
CLK1P49759 NDUFB1P2-201ENST00000449477 176 ntBASIC2.44□□□□□ -2.02
CLK1P49759 AL583843.1-201ENST00000456070 346 ntBASIC2.44□□□□□ -2.02
CLK1P49759 RNU7-187P-201ENST00000458985 68 ntBASIC2.44□□□□□ -2.02
CLK1P49759 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.44□□□□□ -2.02
CLK1P49759 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.44□□□□□ -2.02
CLK1P49759 AC093303.1-201ENST00000514549 295 ntBASIC2.44□□□□□ -2.02
CLK1P49759 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.44□□□□□ -2.02
CLK1P49759 RNU6-1170P-201ENST00000515974 106 ntBASIC2.44□□□□□ -2.02
CLK1P49759 SNORA48.11-201ENST00000517015 89 ntBASIC2.44□□□□□ -2.02
CLK1P49759 SNORA31.19-201ENST00000517079 126 ntBASIC2.44□□□□□ -2.02
CLK1P49759 RNA5SP402-201ENST00000517148 110 ntBASIC2.44□□□□□ -2.02
CLK1P49759 AC025755.1-201ENST00000521306 278 ntBASIC2.44□□□□□ -2.02
CLK1P49759 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.44□□□□□ -2.02
CLK1P49759 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.44□□□□□ -2.02
CLK1P49759 AC026371.1-201ENST00000551867 419 ntBASIC2.44□□□□□ -2.02
CLK1P49759 AC026271.5-201ENST00000577873 130 ntBASIC2.44□□□□□ -2.02
CLK1P49759 LARP7P3-201ENST00000579888 337 ntBASIC2.44□□□□□ -2.02
CLK1P49759 MIR3171-201ENST00000584270 74 ntBASIC2.44□□□□□ -2.02
CLK1P49759 AC080078.3-201ENST00000605407 463 ntBASIC2.44□□□□□ -2.02
CLK1P49759 AL133215.3-201ENST00000609801 448 ntBASIC2.44□□□□□ -2.02
CLK1P49759 AC010378.1-201ENST00000619270 362 ntBASIC2.44□□□□□ -2.02
CLK1P49759 AC091932.3-201ENST00000624223 323 ntBASIC2.44□□□□□ -2.02
CLK1P49759 AL669831.3-213ENST00000636676 183 ntBASIC2.44□□□□□ -2.02
CLK1P49759 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.44□□□□□ -2.02
CLK1P49759 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CLK1P49759 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.43□□□□□ -2.02
CLK1P49759 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CLK1P49759 MIR412-201ENST00000362142 91 ntBASIC2.43□□□□□ -2.02
CLK1P49759 Y_RNA.128-201ENST00000363391 112 ntBASIC2.43□□□□□ -2.02
CLK1P49759 Y_RNA.187-201ENST00000363918 113 ntBASIC2.43□□□□□ -2.02
CLK1P49759 Y_RNA.473-201ENST00000384333 102 ntBASIC2.43□□□□□ -2.02
CLK1P49759 AL512604.1-201ENST00000404812 257 ntBASIC2.43□□□□□ -2.02
CLK1P49759 AL590004.1-201ENST00000405321 300 ntBASIC2.43□□□□□ -2.02
CLK1P49759 Y_RNA.646-201ENST00000410980 101 ntBASIC2.43□□□□□ -2.02
CLK1P49759 Z92545.1-201ENST00000411782 234 ntBASIC2.43□□□□□ -2.02
CLK1P49759 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.43□□□□□ -2.02
CLK1P49759 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.43□□□□□ -2.02
CLK1P49759 AC112220.1-201ENST00000434628 355 ntBASIC2.43□□□□□ -2.02
CLK1P49759 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.43□□□□□ -2.02
CLK1P49759 HMGB1P30-201ENST00000492455 606 ntBASIC2.43□□□□□ -2.02
CLK1P49759 MTCYBP40-201ENST00000509390 1135 ntBASIC2.43□□□□□ -2.02
CLK1P49759 Y_RNA.670-201ENST00000516255 105 ntBASIC2.43□□□□□ -2.02
CLK1P49759 Y_RNA.711-201ENST00000516993 102 ntBASIC2.43□□□□□ -2.02
CLK1P49759 AC069113.1-201ENST00000517763 267 ntBASIC2.43□□□□□ -2.02
CLK1P49759 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.43□□□□□ -2.02
CLK1P49759 SNORD53-201ENST00000579969 78 ntBASIC2.43□□□□□ -2.02
CLK1P49759 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.43□□□□□ -2.02
CLK1P49759 AC018462.2-201ENST00000605375 395 ntBASIC2.43□□□□□ -2.02
CLK1P49759 AP000654.2-201ENST00000605633 586 ntBASIC2.43□□□□□ -2.02
CLK1P49759 MIR6128-201ENST00000615528 109 ntBASIC2.43□□□□□ -2.02
CLK1P49759 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.43□□□□□ -2.02
CLK1P49759 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CLK1P49759 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CLK1P49759 SNORD62.1-201ENST00000362541 86 ntBASIC2.42□□□□□ -2.02
CLK1P49759 RNU6-1159P-201ENST00000362933 107 ntBASIC2.42□□□□□ -2.02
CLK1P49759 Y_RNA.197-201ENST00000364004 102 ntBASIC2.42□□□□□ -2.02
CLK1P49759 Y_RNA.404-201ENST00000383978 102 ntBASIC2.42□□□□□ -2.02
CLK1P49759 RNU6-214P-201ENST00000384130 107 ntBASIC2.42□□□□□ -2.02
CLK1P49759 RNU6-166P-201ENST00000384371 107 ntBASIC2.42□□□□□ -2.02
CLK1P49759 RNU6-306P-201ENST00000384617 107 ntBASIC2.42□□□□□ -2.02
CLK1P49759 MIR95-201ENST00000385072 81 ntBASIC2.42□□□□□ -2.02
CLK1P49759 SNORA46.1-201ENST00000391069 153 ntBASIC2.42□□□□□ -2.02
CLK1P49759 SNORA75.4-201ENST00000391278 119 ntBASIC2.42□□□□□ -2.02
CLK1P49759 Y_RNA.594-201ENST00000410373 140 ntBASIC2.42□□□□□ -2.02
CLK1P49759 Y_RNA.623-201ENST00000411128 95 ntBASIC2.42□□□□□ -2.02
CLK1P49759 UBE2V1P4-201ENST00000425374 344 ntBASIC2.42□□□□□ -2.02
CLK1P49759 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.42□□□□□ -2.02
CLK1P49759 AL645568.3-201ENST00000433683 316 ntBASIC2.42□□□□□ -2.02
CLK1P49759 SNORD5.1-201ENST00000458800 75 ntBASIC2.42□□□□□ -2.02
CLK1P49759 Y_RNA.653-201ENST00000459091 95 ntBASIC2.42□□□□□ -2.02
CLK1P49759 Y_RNA.631-201ENST00000459607 101 ntBASIC2.42□□□□□ -2.02
CLK1P49759 HMGN1P10-201ENST00000474557 553 ntBASIC2.42□□□□□ -2.02
CLK1P49759 AC079804.2-201ENST00000490376 200 ntBASIC2.42□□□□□ -2.02
CLK1P49759 AC104576.1-201ENST00000524225 88 ntBASIC2.42□□□□□ -2.02
CLK1P49759 AL031274.2-201ENST00000599419 203 ntBASIC2.42□□□□□ -2.02
CLK1P49759 AC009229.3-201ENST00000608056 282 ntBASIC2.42□□□□□ -2.02
CLK1P49759 AL162373.1-201ENST00000620433 407 ntBASIC2.42□□□□□ -2.02
CLK1P49759 Y_RNA.31-201ENST00000362574 102 ntBASIC2.41□□□□□ -2.02
CLK1P49759 SNORD114-19-201ENST00000363072 75 ntBASIC2.41□□□□□ -2.02
CLK1P49759 RNU1-112P-201ENST00000364401 164 ntBASIC2.41□□□□□ -2.02
CLK1P49759 Z98749.2-208ENST00000381646 500 ntBASIC2.41□□□□□ -2.02
CLK1P49759 RNU6-692P-201ENST00000384496 107 ntBASIC2.41□□□□□ -2.02
CLK1P49759 PMCHL1-202ENST00000423102 261 ntBASIC2.41□□□□□ -2.02
CLK1P49759 RPS12P2-201ENST00000439728 269 ntBASIC2.41□□□□□ -2.02
CLK1P49759 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.41□□□□□ -2.02
CLK1P49759 AL137792.2-201ENST00000443484 235 ntBASIC2.41□□□□□ -2.02
CLK1P49759 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.41□□□□□ -2.02
CLK1P49759 RPL30P15-201ENST00000457129 321 ntBASIC2.41□□□□□ -2.02
CLK1P49759 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.41□□□□□ -2.02
CLK1P49759 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.41□□□□□ -2.02
CLK1P49759 AC107222.1-201ENST00000510899 637 ntBASIC2.41□□□□□ -2.02
CLK1P49759 AC096725.1-201ENST00000514266 313 ntBASIC2.41□□□□□ -2.02
CLK1P49759 MIR5690-201ENST00000583739 73 ntBASIC2.41□□□□□ -2.02
CLK1P49759 AL627230.6-201ENST00000611129 280 ntBASIC2.41□□□□□ -2.02
CLK1P49759 MIR7106-201ENST00000612419 65 ntBASIC2.41□□□□□ -2.02
CLK1P49759 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms