Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.32□□□□□ -2.04
SLC6A12P48065 FTH1P25-201ENST00000447665 469 ntBASIC2.32□□□□□ -2.04
SLC6A12P48065 MTCO3P10-201ENST00000455912 772 ntBASIC2.32□□□□□ -2.04
SLC6A12P48065 RPS29P27-201ENST00000463711 170 ntBASIC2.32□□□□□ -2.04
SLC6A12P48065 RN7SL429P-201ENST00000479090 223 ntBASIC2.32□□□□□ -2.04
SLC6A12P48065 RN7SL489P-201ENST00000486185 223 ntBASIC2.32□□□□□ -2.04
SLC6A12P48065 MRPL42P6-201ENST00000486397 371 ntBASIC2.32□□□□□ -2.04
SLC6A12P48065 RN7SL327P-201ENST00000488659 223 ntBASIC2.32□□□□□ -2.04
SLC6A12P48065 HMGN1P13-201ENST00000505795 138 ntBASIC2.32□□□□□ -2.04
SLC6A12P48065 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.32□□□□□ -2.04
SLC6A12P48065 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.32□□□□□ -2.04
SLC6A12P48065 RNU6-1153P-201ENST00000516760 105 ntBASIC2.32□□□□□ -2.04
SLC6A12P48065 AC109479.2-201ENST00000517842 174 ntBASIC2.32□□□□□ -2.04
SLC6A12P48065 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.32□□□□□ -2.04
SLC6A12P48065 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
SLC6A12P48065 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.32□□□□□ -2.04
SLC6A12P48065 AP000654.2-201ENST00000605633 586 ntBASIC2.32□□□□□ -2.04
SLC6A12P48065 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
SLC6A12P48065 RN7SL853P-201ENST00000617250 223 ntBASIC2.32□□□□□ -2.04
SLC6A12P48065 AL160413.1-201ENST00000622780 310 ntBASIC2.32□□□□□ -2.04
SLC6A12P48065 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
SLC6A12P48065 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SLC6A12P48065 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SLC6A12P48065 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
SLC6A12P48065 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
SLC6A12P48065 RNU6-1317P-201ENST00000364582 104 ntBASIC2.31□□□□□ -2.04
SLC6A12P48065 Y_RNA.460-201ENST00000384255 102 ntBASIC2.31□□□□□ -2.04
SLC6A12P48065 RNU6-301P-201ENST00000384277 107 ntBASIC2.31□□□□□ -2.04
SLC6A12P48065 Y_RNA.594-201ENST00000410373 140 ntBASIC2.31□□□□□ -2.04
SLC6A12P48065 AL354751.2-201ENST00000415471 210 ntBASIC2.31□□□□□ -2.04
SLC6A12P48065 AC009963.1-201ENST00000417265 157 ntBASIC2.31□□□□□ -2.04
SLC6A12P48065 TOMM20P4-201ENST00000427861 435 ntBASIC2.31□□□□□ -2.04
SLC6A12P48065 AL513328.1-201ENST00000446460 224 ntBASIC2.31□□□□□ -2.04
SLC6A12P48065 AL139109.1-201ENST00000455491 297 ntBASIC2.31□□□□□ -2.04
SLC6A12P48065 AC112771.1-201ENST00000463581 102 ntBASIC2.31□□□□□ -2.04
SLC6A12P48065 AC026436.1-201ENST00000510537 270 ntBASIC2.31□□□□□ -2.04
SLC6A12P48065 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.31□□□□□ -2.04
SLC6A12P48065 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.31□□□□□ -2.04
SLC6A12P48065 AC005741.1-201ENST00000511094 432 ntBASIC2.31□□□□□ -2.04
SLC6A12P48065 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.31□□□□□ -2.04
SLC6A12P48065 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SLC6A12P48065 AC027176.1-201ENST00000560204 514 ntBASIC2.31□□□□□ -2.04
SLC6A12P48065 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.31□□□□□ -2.04
SLC6A12P48065 MIR4719-201ENST00000585233 84 ntBASIC2.31□□□□□ -2.04
SLC6A12P48065 AC044792.1-201ENST00000593294 196 ntBASIC2.31□□□□□ -2.04
SLC6A12P48065 AC011494.1-201ENST00000596454 237 ntBASIC2.31□□□□□ -2.04
SLC6A12P48065 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.31□□□□□ -2.04
SLC6A12P48065 AC090574.1-201ENST00000623186 233 ntBASIC2.31□□□□□ -2.04
SLC6A12P48065 AC243829.7-201ENST00000633081 225 ntBASIC2.31□□□□□ -2.04
SLC6A12P48065 IGHVIII-44-202ENST00000636235 289 ntBASIC2.31□□□□□ -2.04
SLC6A12P48065 AL669831.3-213ENST00000636676 183 ntBASIC2.31□□□□□ -2.04
SLC6A12P48065 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SLC6A12P48065 Y_RNA.315-201ENST00000365117 102 ntBASIC2.3□□□□□ -2.04
SLC6A12P48065 RNU6-43P-201ENST00000384302 107 ntBASIC2.3□□□□□ -2.04
SLC6A12P48065 RNU6-310P-201ENST00000384655 107 ntBASIC2.3□□□□□ -2.04
SLC6A12P48065 MTCYBP4-201ENST00000401524 249 ntBASIC2.3□□□□□ -2.04
SLC6A12P48065 Y_RNA.646-201ENST00000410980 101 ntBASIC2.3□□□□□ -2.04
SLC6A12P48065 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.3□□□□□ -2.04
SLC6A12P48065 AC007677.1-201ENST00000445757 515 ntBASIC2.3□□□□□ -2.04
SLC6A12P48065 ELOCP24-201ENST00000456370 334 ntBASIC2.3□□□□□ -2.04
SLC6A12P48065 RNU6-1037P-201ENST00000459571 107 ntBASIC2.3□□□□□ -2.04
SLC6A12P48065 RPL7P42-201ENST00000481005 679 ntBASIC2.3□□□□□ -2.04
SLC6A12P48065 AP001025.1-201ENST00000486139 332 ntBASIC2.3□□□□□ -2.04
SLC6A12P48065 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.3□□□□□ -2.04
SLC6A12P48065 HMGB3P3-201ENST00000510526 400 ntBASIC2.3□□□□□ -2.04
SLC6A12P48065 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.3□□□□□ -2.04
SLC6A12P48065 RNU6-377P-201ENST00000515965 102 ntBASIC2.3□□□□□ -2.04
SLC6A12P48065 Y_RNA.701-201ENST00000516812 110 ntBASIC2.3□□□□□ -2.04
SLC6A12P48065 CR383656.8-201ENST00000549046 145 ntBASIC2.3□□□□□ -2.04
SLC6A12P48065 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.3□□□□□ -2.04
SLC6A12P48065 MIR4435-1-201ENST00000582552 80 ntBASIC2.3□□□□□ -2.04
SLC6A12P48065 AC009229.3-201ENST00000608056 282 ntBASIC2.3□□□□□ -2.04
SLC6A12P48065 AC097372.5-201ENST00000623665 376 ntBASIC2.3□□□□□ -2.04
SLC6A12P48065 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.3□□□□□ -2.04
SLC6A12P48065 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SLC6A12P48065 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SLC6A12P48065 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
SLC6A12P48065 RNU6-858P-201ENST00000362436 107 ntBASIC2.29□□□□□ -2.04
SLC6A12P48065 Y_RNA.138-201ENST00000363462 102 ntBASIC2.29□□□□□ -2.04
SLC6A12P48065 SNORD42.2-201ENST00000365570 69 ntBASIC2.29□□□□□ -2.04
SLC6A12P48065 SNORD116-20-201ENST00000384529 92 ntBASIC2.29□□□□□ -2.04
SLC6A12P48065 SNORA67.4-201ENST00000384688 142 ntBASIC2.29□□□□□ -2.04
SLC6A12P48065 Y_RNA.579-201ENST00000390939 94 ntBASIC2.29□□□□□ -2.04
SLC6A12P48065 SNORA75.4-201ENST00000391278 119 ntBASIC2.29□□□□□ -2.04
SLC6A12P48065 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SLC6A12P48065 RNU6-1050P-201ENST00000410388 107 ntBASIC2.29□□□□□ -2.04
SLC6A12P48065 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.29□□□□□ -2.04
SLC6A12P48065 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SLC6A12P48065 AC007969.2-201ENST00000441891 191 ntBASIC2.29□□□□□ -2.04
SLC6A12P48065 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.29□□□□□ -2.04
SLC6A12P48065 RPL9P9-202ENST00000466501 579 ntBASIC2.29□□□□□ -2.04
SLC6A12P48065 MED28P2-201ENST00000475771 317 ntBASIC2.29□□□□□ -2.04
SLC6A12P48065 AK3P2-201ENST00000507976 429 ntBASIC2.29□□□□□ -2.04
SLC6A12P48065 AC234781.5-201ENST00000508429 271 ntBASIC2.29□□□□□ -2.04
SLC6A12P48065 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.29□□□□□ -2.04
SLC6A12P48065 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.29□□□□□ -2.04
SLC6A12P48065 RNU1-54P-201ENST00000517181 120 ntBASIC2.29□□□□□ -2.04
SLC6A12P48065 SNORA31.23-201ENST00000517219 133 ntBASIC2.29□□□□□ -2.04
SLC6A12P48065 CBX3P7-201ENST00000532876 502 ntBASIC2.29□□□□□ -2.04
SLC6A12P48065 AP002770.2-201ENST00000543613 532 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 456.9 ms