Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 MIR1244-1-201ENST00000612829 85 ntBASIC2.53□□□□□ -2
RPL3P39023 uc_338.14-201ENST00000613162 166 ntBASIC2.53□□□□□ -2
RPL3P39023 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.53□□□□□ -2
RPL3P39023 MIR1244-3-201ENST00000635744 85 ntBASIC2.53□□□□□ -2
RPL3P39023 MIR1244-2-201ENST00000636449 85 ntBASIC2.53□□□□□ -2
RPL3P39023 MIR1244-4-202ENST00000636813 85 ntBASIC2.53□□□□□ -2
RPL3P39023 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
RPL3P39023 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.53□□□□□ -2
RPL3P39023 AL109809.4-201ENST00000603520 2185 ntBASIC2.53□□□□□ -2
RPL3P39023 AC233981.2-201ENST00000611524 1614 ntBASIC2.53□□□□□ -2
RPL3P39023 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RPL3P39023 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RPL3P39023 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RPL3P39023 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RPL3P39023 RNU6-1010P-201ENST00000362757 107 ntBASIC2.52□□□□□ -2.01
RPL3P39023 RNU5B-2P-201ENST00000363036 113 ntBASIC2.52□□□□□ -2.01
RPL3P39023 RNY3P11-201ENST00000364153 102 ntBASIC2.52□□□□□ -2.01
RPL3P39023 RNA5SP387-201ENST00000364226 106 ntBASIC2.52□□□□□ -2.01
RPL3P39023 RNA5SP139-201ENST00000364340 117 ntBASIC2.52□□□□□ -2.01
RPL3P39023 U3.13-201ENST00000364804 214 ntBASIC2.52□□□□□ -2.01
RPL3P39023 Y_RNA.577-201ENST00000384794 101 ntBASIC2.52□□□□□ -2.01
RPL3P39023 U3.26-201ENST00000391236 204 ntBASIC2.52□□□□□ -2.01
RPL3P39023 AL590004.1-201ENST00000405321 300 ntBASIC2.52□□□□□ -2.01
RPL3P39023 RNU6-1156P-201ENST00000410365 100 ntBASIC2.52□□□□□ -2.01
RPL3P39023 Z98742.2-201ENST00000431564 187 ntBASIC2.52□□□□□ -2.01
RPL3P39023 AL160004.2-201ENST00000432935 350 ntBASIC2.52□□□□□ -2.01
RPL3P39023 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.52□□□□□ -2.01
RPL3P39023 AL441985.1-201ENST00000457727 251 ntBASIC2.52□□□□□ -2.01
RPL3P39023 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.52□□□□□ -2.01
RPL3P39023 S100A11P2-201ENST00000467589 312 ntBASIC2.52□□□□□ -2.01
RPL3P39023 RPL23AP75-201ENST00000491601 451 ntBASIC2.52□□□□□ -2.01
RPL3P39023 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.52□□□□□ -2.01
RPL3P39023 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.52□□□□□ -2.01
RPL3P39023 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.52□□□□□ -2.01
RPL3P39023 AC004584.2-201ENST00000570407 410 ntBASIC2.52□□□□□ -2.01
RPL3P39023 AC016925.2-201ENST00000605108 242 ntBASIC2.52□□□□□ -2.01
RPL3P39023 RPL23AP88-201ENST00000605759 454 ntBASIC2.52□□□□□ -2.01
RPL3P39023 AC006157.1-201ENST00000611750 366 ntBASIC2.52□□□□□ -2.01
RPL3P39023 AC087588.2-201ENST00000617667 426 ntBASIC2.52□□□□□ -2.01
RPL3P39023 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RPL3P39023 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.52□□□□□ -2.01
RPL3P39023 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
RPL3P39023 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
RPL3P39023 MTND4P1-201ENST00000457501 1466 ntBASIC2.52□□□□□ -2.01
RPL3P39023 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.51□□□□□ -2.01
RPL3P39023 AC002543.1-201ENST00000299783 1954 ntBASIC2.51□□□□□ -2.01
RPL3P39023 SNORA44-201ENST00000384584 132 ntBASIC2.51□□□□□ -2.01
RPL3P39023 SNORA12.2-201ENST00000391040 156 ntBASIC2.51□□□□□ -2.01
RPL3P39023 SNORA26.3-201ENST00000391119 136 ntBASIC2.51□□□□□ -2.01
RPL3P39023 CYCSP48-201ENST00000417124 323 ntBASIC2.51□□□□□ -2.01
RPL3P39023 EIF1AXP1-201ENST00000419267 435 ntBASIC2.51□□□□□ -2.01
RPL3P39023 AIMP1P2-201ENST00000425294 312 ntBASIC2.51□□□□□ -2.01
RPL3P39023 AL358075.3-201ENST00000426289 226 ntBASIC2.51□□□□□ -2.01
RPL3P39023 AC078809.1-201ENST00000427601 140 ntBASIC2.51□□□□□ -2.01
RPL3P39023 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.51□□□□□ -2.01
RPL3P39023 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.51□□□□□ -2.01
RPL3P39023 GPM6BP3-201ENST00000442797 145 ntBASIC2.51□□□□□ -2.01
RPL3P39023 AC009296.1-201ENST00000443146 155 ntBASIC2.51□□□□□ -2.01
RPL3P39023 AP000705.1-201ENST00000454567 350 ntBASIC2.51□□□□□ -2.01
RPL3P39023 RNU5F-2P-201ENST00000516066 82 ntBASIC2.51□□□□□ -2.01
RPL3P39023 RNU6-1137P-201ENST00000517073 99 ntBASIC2.51□□□□□ -2.01
RPL3P39023 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.51□□□□□ -2.01
RPL3P39023 AL590705.4-201ENST00000532209 134 ntBASIC2.51□□□□□ -2.01
RPL3P39023 AC079598.5-201ENST00000547460 117 ntBASIC2.51□□□□□ -2.01
RPL3P39023 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.51□□□□□ -2.01
RPL3P39023 MIR3670-2-201ENST00000582974 65 ntBASIC2.51□□□□□ -2.01
RPL3P39023 MIR3670-1-201ENST00000584160 65 ntBASIC2.51□□□□□ -2.01
RPL3P39023 MIR3670-3-201ENST00000584855 65 ntBASIC2.51□□□□□ -2.01
RPL3P39023 MIR3670-4-201ENST00000612260 65 ntBASIC2.51□□□□□ -2.01
RPL3P39023 AC138305.3-201ENST00000624988 240 ntBASIC2.51□□□□□ -2.01
RPL3P39023 SCARNA4-201ENST00000629045 128 ntBASIC2.51□□□□□ -2.01
RPL3P39023 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
RPL3P39023 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
RPL3P39023 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
RPL3P39023 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RPL3P39023 RNU6-212P-201ENST00000362642 104 ntBASIC2.5□□□□□ -2.01
RPL3P39023 SNORD114-19-201ENST00000363072 75 ntBASIC2.5□□□□□ -2.01
RPL3P39023 Y_RNA.333-201ENST00000365274 102 ntBASIC2.5□□□□□ -2.01
RPL3P39023 SNORA70.4-201ENST00000365509 134 ntBASIC2.5□□□□□ -2.01
RPL3P39023 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
RPL3P39023 Y_RNA.405-201ENST00000383979 100 ntBASIC2.5□□□□□ -2.01
RPL3P39023 Y_RNA.428-201ENST00000384078 102 ntBASIC2.5□□□□□ -2.01
RPL3P39023 RNU6-1032P-201ENST00000384100 107 ntBASIC2.5□□□□□ -2.01
RPL3P39023 SNORA18.3-201ENST00000384122 132 ntBASIC2.5□□□□□ -2.01
RPL3P39023 Y_RNA.451-201ENST00000384200 100 ntBASIC2.5□□□□□ -2.01
RPL3P39023 Y_RNA.524-201ENST00000384564 100 ntBASIC2.5□□□□□ -2.01
RPL3P39023 Y_RNA.561-201ENST00000384694 100 ntBASIC2.5□□□□□ -2.01
RPL3P39023 AC138623.1-201ENST00000418060 216 ntBASIC2.5□□□□□ -2.01
RPL3P39023 AL353705.4-201ENST00000449661 238 ntBASIC2.5□□□□□ -2.01
RPL3P39023 snoU13.14-201ENST00000459372 104 ntBASIC2.5□□□□□ -2.01
RPL3P39023 RPS29P12-201ENST00000460178 152 ntBASIC2.5□□□□□ -2.01
RPL3P39023 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.5□□□□□ -2.01
RPL3P39023 RPL36AP48-201ENST00000485521 314 ntBASIC2.5□□□□□ -2.01
RPL3P39023 AC016632.1-201ENST00000503994 196 ntBASIC2.5□□□□□ -2.01
RPL3P39023 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.5□□□□□ -2.01
RPL3P39023 RNA5SP367-201ENST00000516557 118 ntBASIC2.5□□□□□ -2.01
RPL3P39023 RNU4-77P-201ENST00000516692 156 ntBASIC2.5□□□□□ -2.01
RPL3P39023 SNORD116.3-201ENST00000517176 78 ntBASIC2.5□□□□□ -2.01
RPL3P39023 AC004486.1-201ENST00000546846 233 ntBASIC2.5□□□□□ -2.01
RPL3P39023 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms